RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 IGF1RP08069 1367 aa28.2■■■□□ 2.1
DDR1-229ENST00000396342 KIAA0586Q9BVV6 1533 aa28.12■■■□□ 2.09
DDR1-229ENST00000396342 CARMIL1Q5VZK9 1371 aa28.1■■■□□ 2.09
DDR1-229ENST00000396342 CUL7Q14999 1698 aa28.1■■■□□ 2.09
DDR1-229ENST00000396342 AEBP2Q6ZN18 517 aaPredicted RBP28.09■■■□□ 2.09
DDR1-229ENST00000396342 RUSC2Q8N2Y8 1516 aa28.08■■■□□ 2.09
DDR1-229ENST00000396342 CARMIL2Q6F5E8 1435 aa28.01■■■□□ 2.07
DDR1-229ENST00000396342 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
DDR1-229ENST00000396342 TTBK1Q5TCY1 1321 aaPredicted RBP27.98■■■□□ 2.07
DDR1-229ENST00000396342 PTPRGP23470 1445 aa27.95■■■□□ 2.07
DDR1-229ENST00000396342 TNIKQ9UKE5 1360 aa27.88■■■□□ 2.05
DDR1-229ENST00000396342 ABCC10Q5T3U5 1492 aa27.85■■■□□ 2.05
DDR1-229ENST00000396342 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
DDR1-229ENST00000396342 RAPGEF2Q9Y4G8 1499 aa27.82■■■□□ 2.04
DDR1-229ENST00000396342 IQGAP2Q13576 1575 aa27.8■■■□□ 2.04
DDR1-229ENST00000396342 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
DDR1-229ENST00000396342 ADCY10Q96PN6 1610 aa27.78■■■□□ 2.04
DDR1-229ENST00000396342 UACAQ9BZF9 1416 aa27.68■■■□□ 2.02
DDR1-229ENST00000396342 ABCC2Q92887 1545 aa27.68■■■□□ 2.02
DDR1-229ENST00000396342 KIF13AQ9H1H9 1805 aa27.67■■■□□ 2.02
DDR1-229ENST00000396342 DIP2BQ9P265 1576 aa27.66■■■□□ 2.02
DDR1-229ENST00000396342 PLB1Q6P1J6 1458 aa27.66■■■□□ 2.02
DDR1-229ENST00000396342 UHRF1BP1LA0JNW5 1464 aa27.62■■■□□ 2.01
DDR1-229ENST00000396342 ASXL2Q76L83 1435 aa27.6■■■□□ 2.01
DDR1-229ENST00000396342 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
DDR1-229ENST00000396342 DISP1Q96F81 1524 aa27.59■■■□□ 2.01
DDR1-229ENST00000396342 GOLGA3Q08378 1498 aa27.58■■■□□ 2.01
DDR1-229ENST00000396342 KDM6BO15054 1643 aa27.52■■■□□ 2
DDR1-229ENST00000396342 KIAA0556O60303 1618 aa27.49■■□□□ 1.99
DDR1-229ENST00000396342 KDM5BQ9UGL1 1544 aa27.46■■□□□ 1.99
DDR1-229ENST00000396342 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
DDR1-229ENST00000396342 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
DDR1-229ENST00000396342 GLI2P10070 1586 aa27.43■■□□□ 1.98
DDR1-229ENST00000396342 TSPOAP1O95153 1857 aa27.42■■□□□ 1.98
DDR1-229ENST00000396342 TEX14Q8IWB6 1497 aa27.4■■□□□ 1.98
DDR1-229ENST00000396342 EPRSP07814 1512 aaKnown RBP27.38■■□□□ 1.97
DDR1-229ENST00000396342 CTTNBP2Q8WZ74 1663 aa27.37■■□□□ 1.97
DDR1-229ENST00000396342 KCNH8Q96L42 1107 aa27.35■■□□□ 1.97
DDR1-229ENST00000396342 WDR7Q9Y4E6 1490 aa27.34■■□□□ 1.97
DDR1-229ENST00000396342 EEA1Q15075 1411 aa27.33■■□□□ 1.97
DDR1-229ENST00000396342 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
DDR1-229ENST00000396342 ZCCHC11Q5TAX3 1644 aaKnown RBP27.32■■□□□ 1.96
DDR1-229ENST00000396342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.26■■□□□ 1.95
DDR1-229ENST00000396342 HNRNPUL2Q1KMD3 747 aaKnown RBP27.26■■□□□ 1.95
DDR1-229ENST00000396342 CD109Q6YHK3 1445 aa27.24■■□□□ 1.95
DDR1-229ENST00000396342 ARID3CA6NKF2 412 aa27.23■■□□□ 1.95
DDR1-229ENST00000396342 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
DDR1-229ENST00000396342 ABCA8O94911 1581 aa27.22■■□□□ 1.95
DDR1-229ENST00000396342 KDM4FA0A1W2PPD8 638 aa27.2■■□□□ 1.94
DDR1-229ENST00000396342 MAP3K4Q9Y6R4 1608 aa27.19■■□□□ 1.94
DDR1-229ENST00000396342 MAGI3Q5TCQ9 1506 aa27.12■■□□□ 1.93
DDR1-229ENST00000396342 PPRC1Q5VV67 1664 aaKnown RBP27.12■■□□□ 1.93
DDR1-229ENST00000396342 ATP10BO94823 1461 aa27.07■■□□□ 1.92
DDR1-229ENST00000396342 COL17A1Q9UMD9 1497 aaPredicted RBP27.07■■□□□ 1.92
DDR1-229ENST00000396342 CFAP43Q8NDM7 1665 aa27.06■■□□□ 1.92
DDR1-229ENST00000396342 PLEKHD1A6NEE1 506 aa27.04■■□□□ 1.92
DDR1-229ENST00000396342 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
DDR1-229ENST00000396342 PHLDB1Q86UU1 1377 aa27.04■■□□□ 1.92
DDR1-229ENST00000396342 ADGRL1O94910 1474 aa27.03■■□□□ 1.92
DDR1-229ENST00000396342 SAMD9Q5K651 1589 aa27.01■■□□□ 1.92
DDR1-229ENST00000396342 FHOD3Q2V2M9 1422 aa26.98■■□□□ 1.91
DDR1-229ENST00000396342 RAPGEF6Q8TEU7 1601 aa26.98■■□□□ 1.91
DDR1-229ENST00000396342 EHMT2Q96KQ7 1210 aa26.94■■□□□ 1.9
DDR1-229ENST00000396342 EFCAB5A4FU69 1503 aa26.92■■□□□ 1.9
DDR1-229ENST00000396342 ATP1B4Q9UN42 357 aaPredicted RBP26.92■■□□□ 1.9
DDR1-229ENST00000396342 KIF21BO75037 1637 aa26.9■■□□□ 1.9
DDR1-229ENST00000396342 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
DDR1-229ENST00000396342 NUP153P49790 1475 aaKnown RBP26.87■■□□□ 1.89
DDR1-229ENST00000396342 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
DDR1-229ENST00000396342 NEO1Q92859 1461 aa26.87■■□□□ 1.89
DDR1-229ENST00000396342 CDK11AQ9UQ88 783 aaPredicted RBP26.85■■□□□ 1.89
DDR1-229ENST00000396342 ABCA9Q8IUA7 1624 aa26.85■■□□□ 1.89
DDR1-229ENST00000396342 RAPGEF3O95398 923 aa26.83■■□□□ 1.89
DDR1-229ENST00000396342 ARID4BQ4LE39 1312 aaPredicted RBP26.82■■□□□ 1.88
DDR1-229ENST00000396342 FMN1Q68DA7 1419 aa26.8■■□□□ 1.88
DDR1-229ENST00000396342 DENND4BO75064 1496 aaPredicted RBP26.72■■□□□ 1.87
DDR1-229ENST00000396342 FANCAO15360 1455 aa26.7■■□□□ 1.87
DDR1-229ENST00000396342 AKNAQ7Z591 1439 aa26.69■■□□□ 1.86
DDR1-229ENST00000396342 CFAP74Q9C0B2 1584 aa26.66■■□□□ 1.86
DDR1-229ENST00000396342 EFCAB2Q5VUJ9 269 aa26.64■■□□□ 1.86
DDR1-229ENST00000396342 CLIP1P30622 1438 aa26.63■■□□□ 1.85
DDR1-229ENST00000396342 HECW1Q76N89 1606 aa26.62■■□□□ 1.85
DDR1-229ENST00000396342 CDK13Q14004 1512 aaKnown RBP26.62■■□□□ 1.85
DDR1-229ENST00000396342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.61■■□□□ 1.856e-7■■■■□ 21.9
DDR1-229ENST00000396342 POGZQ7Z3K3 1410 aa26.61■■□□□ 1.85
DDR1-229ENST00000396342 ARHGAP35Q9NRY4 1499 aa26.6■■□□□ 1.85
DDR1-229ENST00000396342 HECW2Q9P2P5 1572 aa26.58■■□□□ 1.85
DDR1-229ENST00000396342 MYT1LQ9UL68 1186 aa26.57■■□□□ 1.84
DDR1-229ENST00000396342 PLCH2O75038 1416 aa26.56■■□□□ 1.84
DDR1-229ENST00000396342 SCAPERQ9BY12 1400 aa26.54■■□□□ 1.84
DDR1-229ENST00000396342 MAGI2Q86UL8 1455 aa26.52■■□□□ 1.84
DDR1-229ENST00000396342 TTC37Q6PGP7 1564 aa26.51■■□□□ 1.83
DDR1-229ENST00000396342 PTPRMP28827 1452 aa26.51■■□□□ 1.83
DDR1-229ENST00000396342 TROQ12816 1431 aaPredicted RBP26.49■■□□□ 1.83
DDR1-229ENST00000396342 FRMPD1Q5SYB0 1578 aa26.49■■□□□ 1.83
DDR1-229ENST00000396342 ARHGEF40Q8TER5 1519 aa26.48■■□□□ 1.83
DDR1-229ENST00000396342 ZFYVE16Q7Z3T8 1539 aa26.47■■□□□ 1.83
DDR1-229ENST00000396342 KIF14Q15058 1648 aa26.46■■□□□ 1.83
DDR1-229ENST00000396342 MLECQ14165 292 aa26.45■■□□□ 1.82
DDR1-229ENST00000396342 PLPPR3Q6T4P5 718 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms