RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 JPH4Q96JJ6 628 aa29.68■■■□□ 2.34
UPK3A-202ENST00000396082 PRG4Q92954 1404 aaPredicted RBP29.68■■■□□ 2.34
UPK3A-202ENST00000396082 KIAA0586Q9BVV6 1533 aa29.66■■■□□ 2.34
UPK3A-202ENST00000396082 RAPGEF2Q9Y4G8 1499 aa29.58■■■□□ 2.33
UPK3A-202ENST00000396082 TRHP20396 242 aaPredicted RBP29.52■■■□□ 2.32
UPK3A-202ENST00000396082 IQGAP2Q13576 1575 aa29.5■■■□□ 2.31
UPK3A-202ENST00000396082 CARMIL2Q6F5E8 1435 aa29.39■■■□□ 2.3
UPK3A-202ENST00000396082 PRXQ9BXM0 1461 aa29.37■■■□□ 2.29
UPK3A-202ENST00000396082 CTTNBP2Q8WZ74 1663 aa29.36■■■□□ 2.29
UPK3A-202ENST00000396082 EEA1Q15075 1411 aa29.32■■■□□ 2.28
UPK3A-202ENST00000396082 TTBK1Q5TCY1 1321 aaPredicted RBP29.31■■■□□ 2.28
UPK3A-202ENST00000396082 CSRNP3Q8WYN3 585 aa29.31■■■□□ 2.28
UPK3A-202ENST00000396082 UGGT2Q9NYU1 1516 aa29.29■■■□□ 2.28
UPK3A-202ENST00000396082 PTPRGP23470 1445 aa29.28■■■□□ 2.28
UPK3A-202ENST00000396082 TNIKQ9UKE5 1360 aa29.28■■■□□ 2.28
UPK3A-202ENST00000396082 CHIC1Q5VXU3 224 aa29.26■■■□□ 2.27
UPK3A-202ENST00000396082 ADCY10Q96PN6 1610 aa29.26■■■□□ 2.27
UPK3A-202ENST00000396082 NPM1P06748 294 aaKnown RBP eCLIP29.25■■■□□ 2.27
UPK3A-202ENST00000396082 DISP1Q96F81 1524 aa29.25■■■□□ 2.27
UPK3A-202ENST00000396082 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
UPK3A-202ENST00000396082 KIAA0556O60303 1618 aa29.21■■■□□ 2.27
UPK3A-202ENST00000396082 GOLGA3Q08378 1498 aa29.15■■■□□ 2.26
UPK3A-202ENST00000396082 MAPKBP1O60336 1514 aa29.11■■■□□ 2.25
UPK3A-202ENST00000396082 UACAQ9BZF9 1416 aa29.08■■■□□ 2.25
UPK3A-202ENST00000396082 KIF13AQ9H1H9 1805 aa29.06■■■□□ 2.24
UPK3A-202ENST00000396082 KIF21BO75037 1637 aa29.05■■■□□ 2.24
UPK3A-202ENST00000396082 ABCC2Q92887 1545 aa29.05■■■□□ 2.24
UPK3A-202ENST00000396082 UHRF1BP1LA0JNW5 1464 aa29.04■■■□□ 2.24
UPK3A-202ENST00000396082 ABCC10Q5T3U5 1492 aa29■■■□□ 2.23
UPK3A-202ENST00000396082 FAM69CQ0P6D2 419 aa28.97■■■□□ 2.23
UPK3A-202ENST00000396082 DIP2BQ9P265 1576 aa28.96■■■□□ 2.23
UPK3A-202ENST00000396082 PLB1Q6P1J6 1458 aa28.93■■■□□ 2.22
UPK3A-202ENST00000396082 P3H3Q8IVL6 736 aa28.93■■■□□ 2.22
UPK3A-202ENST00000396082 RANGAP1P46060 587 aaPredicted RBP28.92■■■□□ 2.22
UPK3A-202ENST00000396082 SAMD9Q5K651 1589 aa28.92■■■□□ 2.22
UPK3A-202ENST00000396082 KDM5BQ9UGL1 1544 aa28.91■■■□□ 2.22
UPK3A-202ENST00000396082 EHMT2Q96KQ7 1210 aa28.91■■■□□ 2.22
UPK3A-202ENST00000396082 ASXL2Q76L83 1435 aa28.9■■■□□ 2.22
UPK3A-202ENST00000396082 ZCCHC11Q5TAX3 1644 aaKnown RBP28.9■■■□□ 2.22
UPK3A-202ENST00000396082 ABCA8O94911 1581 aa28.88■■■□□ 2.21
UPK3A-202ENST00000396082 UBTFP17480 764 aaKnown RBP28.85■■■□□ 2.21
UPK3A-202ENST00000396082 TSPOAP1O95153 1857 aa28.8■■■□□ 2.2
UPK3A-202ENST00000396082 EFCAB5A4FU69 1503 aa28.77■■■□□ 2.2
UPK3A-202ENST00000396082 FHOD3Q2V2M9 1422 aa28.76■■■□□ 2.19
UPK3A-202ENST00000396082 GLI2P10070 1586 aa28.74■■■□□ 2.19
UPK3A-202ENST00000396082 RAPGEF6Q8TEU7 1601 aa28.72■■■□□ 2.19
UPK3A-202ENST00000396082 WDR7Q9Y4E6 1490 aa28.72■■■□□ 2.19
UPK3A-202ENST00000396082 EPRSP07814 1512 aaKnown RBP28.72■■■□□ 2.19
UPK3A-202ENST00000396082 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
UPK3A-202ENST00000396082 ATP10BO94823 1461 aa28.63■■■□□ 2.17
UPK3A-202ENST00000396082 MAP3K4Q9Y6R4 1608 aa28.62■■■□□ 2.17
UPK3A-202ENST00000396082 KDM6BO15054 1643 aa28.61■■■□□ 2.17
UPK3A-202ENST00000396082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.6■■■□□ 2.17
UPK3A-202ENST00000396082 HNRNPUL2Q1KMD3 747 aaKnown RBP28.6■■■□□ 2.17
UPK3A-202ENST00000396082 KCNH8Q96L42 1107 aa28.6■■■□□ 2.17
UPK3A-202ENST00000396082 PPRC1Q5VV67 1664 aaKnown RBP28.59■■■□□ 2.17
UPK3A-202ENST00000396082 NUP153P49790 1475 aaKnown RBP28.58■■■□□ 2.17
UPK3A-202ENST00000396082 ARHGAP35Q9NRY4 1499 aa28.55■■■□□ 2.16
UPK3A-202ENST00000396082 TEX14Q8IWB6 1497 aa28.53■■■□□ 2.16
UPK3A-202ENST00000396082 CFAP43Q8NDM7 1665 aa28.53■■■□□ 2.16
UPK3A-202ENST00000396082 FMN1Q68DA7 1419 aa28.51■■■□□ 2.15
UPK3A-202ENST00000396082 CD109Q6YHK3 1445 aa28.48■■■□□ 2.15
UPK3A-202ENST00000396082 ATP1B4Q9UN42 357 aaPredicted RBP28.44■■■□□ 2.14
UPK3A-202ENST00000396082 HECW1Q76N89 1606 aa28.43■■■□□ 2.14
UPK3A-202ENST00000396082 MAGI3Q5TCQ9 1506 aa28.42■■■□□ 2.14
UPK3A-202ENST00000396082 PLEKHD1A6NEE1 506 aa28.4■■■□□ 2.14
UPK3A-202ENST00000396082 ABCA9Q8IUA7 1624 aa28.4■■■□□ 2.14
UPK3A-202ENST00000396082 CDK13Q14004 1512 aaKnown RBP28.38■■■□□ 2.13
UPK3A-202ENST00000396082 CLIP1P30622 1438 aa28.34■■■□□ 2.13
UPK3A-202ENST00000396082 COL17A1Q9UMD9 1497 aaPredicted RBP28.31■■■□□ 2.12
UPK3A-202ENST00000396082 PCF11O94913 1555 aaKnown RBP28.27■■■□□ 2.12
UPK3A-202ENST00000396082 CDK11AQ9UQ88 783 aaPredicted RBP28.25■■■□□ 2.11
UPK3A-202ENST00000396082 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
UPK3A-202ENST00000396082 CASKIN1Q8WXD9 1431 aa28.23■■■□□ 2.11
UPK3A-202ENST00000396082 LRRIQ1Q96JM4 1722 aa28.22■■■□□ 2.11
UPK3A-202ENST00000396082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.22■■■□□ 2.11
UPK3A-202ENST00000396082 TTC37Q6PGP7 1564 aa28.2■■■□□ 2.1
UPK3A-202ENST00000396082 NEO1Q92859 1461 aa28.19■■■□□ 2.1
UPK3A-202ENST00000396082 PHLDB1Q86UU1 1377 aa28.18■■■□□ 2.1
UPK3A-202ENST00000396082 CCDC18Q5T9S5 1454 aa28.18■■■□□ 2.1
UPK3A-202ENST00000396082 FYCO1Q9BQS8 1478 aa28.17■■■□□ 2.1
UPK3A-202ENST00000396082 ARAP3Q8WWN8 1544 aa28.17■■■□□ 2.1
UPK3A-202ENST00000396082 CEP162Q5TB80 1403 aa28.15■■■□□ 2.1
UPK3A-202ENST00000396082 KIF14Q15058 1648 aa28.14■■■□□ 2.1
UPK3A-202ENST00000396082 CFAP74Q9C0B2 1584 aa28.13■■■□□ 2.09
UPK3A-202ENST00000396082 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
UPK3A-202ENST00000396082 FANCAO15360 1455 aa28.11■■■□□ 2.09
UPK3A-202ENST00000396082 MYO5CQ9NQX4 1742 aa28.08■■■□□ 2.09
UPK3A-202ENST00000396082 LOC105371045A0A1W2PR82 267 aa28.07■■■□□ 2.08
UPK3A-202ENST00000396082 AKNAQ7Z591 1439 aa28.05■■■□□ 2.08
UPK3A-202ENST00000396082 PLCH2O75038 1416 aa28.03■■■□□ 2.08
UPK3A-202ENST00000396082 RAPGEF3O95398 923 aa28.03■■■□□ 2.08
UPK3A-202ENST00000396082 DENND4BO75064 1496 aaPredicted RBP28■■■□□ 2.07
UPK3A-202ENST00000396082 FRMPD1Q5SYB0 1578 aa27.99■■■□□ 2.07
UPK3A-202ENST00000396082 KDM4FA0A1W2PPD8 638 aa27.97■■■□□ 2.07
UPK3A-202ENST00000396082 ADGRL1O94910 1474 aa27.96■■■□□ 2.07
UPK3A-202ENST00000396082 ARHGAP5Q13017 1502 aa27.96■■■□□ 2.07
UPK3A-202ENST00000396082 RICTORQ6R327 1708 aa27.95■■■□□ 2.07
UPK3A-202ENST00000396082 EFCAB2Q5VUJ9 269 aa27.95■■■□□ 2.06
UPK3A-202ENST00000396082 SCAPERQ9BY12 1400 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms