RNA–Protein interactions for RNA: ENST00000395285.3

ARFGAP1-204, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-204ENST00000395285 YTHDC1Q96MU7 727 aaKnown RBP24.46■■□□□ 1.51
ARFGAP1-204ENST00000395285 ARAP1Q96P48 1450 aa24.42■■□□□ 1.5
ARFGAP1-204ENST00000395285 MIER1Q8N108 512 aa24.35■■□□□ 1.49
ARFGAP1-204ENST00000395285 KIF21AQ7Z4S6 1674 aa24.35■■□□□ 1.49
ARFGAP1-204ENST00000395285 KANK4Q5T7N3 995 aaPredicted RBP24.35■■□□□ 1.49
ARFGAP1-204ENST00000395285 ARHGAP35Q9NRY4 1499 aa24.33■■□□□ 1.49
ARFGAP1-204ENST00000395285 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
ARFGAP1-204ENST00000395285 CUL7Q14999 1698 aa24.28■■□□□ 1.48
ARFGAP1-204ENST00000395285 ABCA5Q8WWZ7 1642 aa24.22■■□□□ 1.47
ARFGAP1-204ENST00000395285 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
ARFGAP1-204ENST00000395285 GAPVD1Q14C86 1478 aa24.2■■□□□ 1.46
ARFGAP1-204ENST00000395285 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
ARFGAP1-204ENST00000395285 ITGAEP38570 1179 aa24.17■■□□□ 1.46
ARFGAP1-204ENST00000395285 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
ARFGAP1-204ENST00000395285 DHX57Q6P158 1386 aaKnown RBP24.14■■□□□ 1.46
ARFGAP1-204ENST00000395285 TSHZ2Q9NRE2 1034 aa24.12■■□□□ 1.45
ARFGAP1-204ENST00000395285 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
ARFGAP1-204ENST00000395285 EFCAB5A4FU69 1503 aa24.07■■□□□ 1.44
ARFGAP1-204ENST00000395285 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
ARFGAP1-204ENST00000395285 MAP3K1Q13233 1512 aa24.05■■□□□ 1.44
ARFGAP1-204ENST00000395285 WDR62O43379 1518 aa24.01■■□□□ 1.43
ARFGAP1-204ENST00000395285 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
ARFGAP1-204ENST00000395285 CCNB3Q8WWL7 1395 aa23.99■■□□□ 1.43
ARFGAP1-204ENST00000395285 CLSPNQ9HAW4 1339 aa23.99■■□□□ 1.43
ARFGAP1-204ENST00000395285 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
ARFGAP1-204ENST00000395285 TIAM1Q13009 1591 aa23.98■■□□□ 1.43
ARFGAP1-204ENST00000395285 P3H3Q8IVL6 736 aa23.98■■□□□ 1.43
ARFGAP1-204ENST00000395285 IFT140Q96RY7 1462 aa23.97■■□□□ 1.43
ARFGAP1-204ENST00000395285 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
ARFGAP1-204ENST00000395285 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.438e-7■■■□□ 16.1
ARFGAP1-204ENST00000395285 SUPT16HQ9Y5B9 1047 aaKnown RBP23.95■■□□□ 1.42
ARFGAP1-204ENST00000395285 PBRM1Q86U86 1689 aa23.95■■□□□ 1.42
ARFGAP1-204ENST00000395285 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
ARFGAP1-204ENST00000395285 PCF11O94913 1555 aaKnown RBP23.92■■□□□ 1.42
ARFGAP1-204ENST00000395285 FYCO1Q9BQS8 1478 aa23.91■■□□□ 1.42
ARFGAP1-204ENST00000395285 ATP1B4Q9UN42 357 aaPredicted RBP23.9■■□□□ 1.42
ARFGAP1-204ENST00000395285 LRRC9Q6ZRR7 1453 aa23.9■■□□□ 1.42
ARFGAP1-204ENST00000395285 FMN1Q68DA7 1419 aa23.89■■□□□ 1.42
ARFGAP1-204ENST00000395285 CASKIN1Q8WXD9 1431 aa23.89■■□□□ 1.42
ARFGAP1-204ENST00000395285 SAMD9Q5K651 1589 aa23.88■■□□□ 1.41
ARFGAP1-204ENST00000395285 ADAMTS12P58397 1594 aa23.87■■□□□ 1.41
ARFGAP1-204ENST00000395285 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
ARFGAP1-204ENST00000395285 ZNF608Q9ULD9 1512 aaPredicted RBP23.85■■□□□ 1.41
ARFGAP1-204ENST00000395285 RAB3GAP2Q9H2M9 1393 aa23.83■■□□□ 1.41
ARFGAP1-204ENST00000395285 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
ARFGAP1-204ENST00000395285 THOC2Q8NI27 1593 aaKnown RBP23.81■■□□□ 1.4
ARFGAP1-204ENST00000395285 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
ARFGAP1-204ENST00000395285 PHLDB1Q86UU1 1377 aa23.76■■□□□ 1.39
ARFGAP1-204ENST00000395285 IQGAP2Q13576 1575 aa23.75■■□□□ 1.39
ARFGAP1-204ENST00000395285 EIF4G3O43432 1585 aaKnown RBP23.73■■□□□ 1.39
ARFGAP1-204ENST00000395285 ANO8Q9HCE9 1232 aaPredicted RBP23.71■■□□□ 1.39
ARFGAP1-204ENST00000395285 SIN3AQ96ST3 1273 aa23.7■■□□□ 1.39
ARFGAP1-204ENST00000395285 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
ARFGAP1-204ENST00000395285 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
ARFGAP1-204ENST00000395285 KCNH8Q96L42 1107 aa23.65■■□□□ 1.38
ARFGAP1-204ENST00000395285 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
ARFGAP1-204ENST00000395285 KIAA0586Q9BVV6 1533 aa23.64■■□□□ 1.37
ARFGAP1-204ENST00000395285 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.37
ARFGAP1-204ENST00000395285 GRIN2AQ12879 1464 aa23.64■■□□□ 1.37
ARFGAP1-204ENST00000395285 MTUS2Q5JR59 1369 aa23.62■■□□□ 1.37
ARFGAP1-204ENST00000395285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.58■■□□□ 1.375e-7■■■■■ 54.4
ARFGAP1-204ENST00000395285 LRRIQ1Q96JM4 1722 aa23.58■■□□□ 1.37
ARFGAP1-204ENST00000395285 CCDC18Q5T9S5 1454 aa23.57■■□□□ 1.36
ARFGAP1-204ENST00000395285 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
ARFGAP1-204ENST00000395285 HIRIP3Q9BW71 556 aaPredicted RBP23.56■■□□□ 1.36
ARFGAP1-204ENST00000395285 CHMP7Q8WUX9 453 aaPredicted RBP23.55■■□□□ 1.36
ARFGAP1-204ENST00000395285 DDX10Q13206 875 aaKnown RBP23.54■■□□□ 1.36
ARFGAP1-204ENST00000395285 HECW1Q76N89 1606 aa23.54■■□□□ 1.36
ARFGAP1-204ENST00000395285 EHBP1L1Q8N3D4 1523 aa23.52■■□□□ 1.36
ARFGAP1-204ENST00000395285 FGD6Q6ZV73 1430 aa23.51■■□□□ 1.35
ARFGAP1-204ENST00000395285 DISP1Q96F81 1524 aa23.5■■□□□ 1.35
ARFGAP1-204ENST00000395285 KIAA0556O60303 1618 aa23.49■■□□□ 1.35
ARFGAP1-204ENST00000395285 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
ARFGAP1-204ENST00000395285 RBM19Q9Y4C8 960 aaKnown RBP23.48■■□□□ 1.35
ARFGAP1-204ENST00000395285 EPRSP07814 1512 aaKnown RBP23.48■■□□□ 1.35
ARFGAP1-204ENST00000395285 SUPT6HQ7KZ85 1726 aaKnown RBP23.47■■□□□ 1.35
ARFGAP1-204ENST00000395285 CEP170Q5SW79 1584 aa23.45■■□□□ 1.34
ARFGAP1-204ENST00000395285 MYOM3Q5VTT5 1437 aa23.45■■□□□ 1.34
ARFGAP1-204ENST00000395285 FBLN2P98095 1184 aa23.44■■□□□ 1.34
ARFGAP1-204ENST00000395285 MAGI3Q5TCQ9 1506 aa23.43■■□□□ 1.34
ARFGAP1-204ENST00000395285 NUP160Q12769 1436 aa23.43■■□□□ 1.34
ARFGAP1-204ENST00000395285 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
ARFGAP1-204ENST00000395285 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
ARFGAP1-204ENST00000395285 BCANQ96GW7 911 aa23.37■■□□□ 1.33
ARFGAP1-204ENST00000395285 MSH5O43196 834 aa23.36■■□□□ 1.33
ARFGAP1-204ENST00000395285 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
ARFGAP1-204ENST00000395285 CARMIL2Q6F5E8 1435 aa23.34■■□□□ 1.33
ARFGAP1-204ENST00000395285 JPH4Q96JJ6 628 aa23.34■■□□□ 1.33
ARFGAP1-204ENST00000395285 SALL2Q9Y467 1007 aaPredicted RBP23.33■■□□□ 1.33
ARFGAP1-204ENST00000395285 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.33
ARFGAP1-204ENST00000395285 NUP153P49790 1475 aaKnown RBP23.32■■□□□ 1.32
ARFGAP1-204ENST00000395285 PTPRKQ15262 1439 aa23.31■■□□□ 1.32
ARFGAP1-204ENST00000395285 PTPN23Q9H3S7 1636 aa23.3■■□□□ 1.32
ARFGAP1-204ENST00000395285 ARID3CA6NKF2 412 aa23.29■■□□□ 1.32
ARFGAP1-204ENST00000395285 TIMELESSQ9UNS1 1208 aa23.28■■□□□ 1.32
ARFGAP1-204ENST00000395285 TCOF1Q13428 1488 aaKnown RBP23.28■■□□□ 1.32
ARFGAP1-204ENST00000395285 TONSLQ96HA7 1378 aa23.27■■□□□ 1.32
ARFGAP1-204ENST00000395285 DEKP35659 375 aaKnown RBP23.27■■□□□ 1.32
ARFGAP1-204ENST00000395285 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
ARFGAP1-204ENST00000395285 UBE2Q2Q8WVN8 375 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms