RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 LRRIQ1Q96JM4 1722 aa22.48■■□□□ 1.19
CDC42SE2-202ENST00000395246 TIAM1Q13009 1591 aa22.46■■□□□ 1.19
CDC42SE2-202ENST00000395246 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
CDC42SE2-202ENST00000395246 IQGAP2Q13576 1575 aa22.45■■□□□ 1.19
CDC42SE2-202ENST00000395246 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
CDC42SE2-202ENST00000395246 ZNF608Q9ULD9 1512 aaPredicted RBP22.44■■□□□ 1.18
CDC42SE2-202ENST00000395246 PCF11O94913 1555 aaKnown RBP22.41■■□□□ 1.18
CDC42SE2-202ENST00000395246 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
CDC42SE2-202ENST00000395246 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
CDC42SE2-202ENST00000395246 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
CDC42SE2-202ENST00000395246 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
CDC42SE2-202ENST00000395246 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
CDC42SE2-202ENST00000395246 GRIN2AQ12879 1464 aa22.37■■□□□ 1.17
CDC42SE2-202ENST00000395246 NUP160Q12769 1436 aa22.36■■□□□ 1.17
CDC42SE2-202ENST00000395246 KIAA0586Q9BVV6 1533 aa22.35■■□□□ 1.17
CDC42SE2-202ENST00000395246 CEP170Q5SW79 1584 aa22.34■■□□□ 1.17
CDC42SE2-202ENST00000395246 SHROOM2Q13796 1616 aa22.33■■□□□ 1.16
CDC42SE2-202ENST00000395246 KIAA0556O60303 1618 aa22.31■■□□□ 1.16
CDC42SE2-202ENST00000395246 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
CDC42SE2-202ENST00000395246 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
CDC42SE2-202ENST00000395246 FMN1Q68DA7 1419 aa22.28■■□□□ 1.16
CDC42SE2-202ENST00000395246 DISP1Q96F81 1524 aa22.25■■□□□ 1.15
CDC42SE2-202ENST00000395246 LRRC9Q6ZRR7 1453 aa22.23■■□□□ 1.15
CDC42SE2-202ENST00000395246 HECW1Q76N89 1606 aa22.22■■□□□ 1.15
CDC42SE2-202ENST00000395246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.14
CDC42SE2-202ENST00000395246 CCDC18Q5T9S5 1454 aa22.18■■□□□ 1.14
CDC42SE2-202ENST00000395246 CHD1O14646 1710 aa22.16■■□□□ 1.14
CDC42SE2-202ENST00000395246 PCGF6Q9BYE7 350 aa22.15■■□□□ 1.14
CDC42SE2-202ENST00000395246 ADCY10Q96PN6 1610 aa22.15■■□□□ 1.14
CDC42SE2-202ENST00000395246 HRCP23327 699 aa22.14■■□□□ 1.13
CDC42SE2-202ENST00000395246 EHBP1L1Q8N3D4 1523 aa22.11■■□□□ 1.13
CDC42SE2-202ENST00000395246 CLASP1Q7Z460 1538 aa22.09■■□□□ 1.13
CDC42SE2-202ENST00000395246 FHOD3Q2V2M9 1422 aa22.09■■□□□ 1.13
CDC42SE2-202ENST00000395246 RAPGEF6Q8TEU7 1601 aa22.08■■□□□ 1.13
CDC42SE2-202ENST00000395246 SUPT6HQ7KZ85 1726 aaKnown RBP22.06■■□□□ 1.12
CDC42SE2-202ENST00000395246 ABCA8O94911 1581 aa22.06■■□□□ 1.12
CDC42SE2-202ENST00000395246 MAGI3Q5TCQ9 1506 aa22■■□□□ 1.11
CDC42SE2-202ENST00000395246 TCOF1Q13428 1488 aaKnown RBP21.99■■□□□ 1.11
CDC42SE2-202ENST00000395246 EHMT2Q96KQ7 1210 aa21.97■■□□□ 1.11
CDC42SE2-202ENST00000395246 EPRSP07814 1512 aaKnown RBP21.97■■□□□ 1.11
CDC42SE2-202ENST00000395246 NUP153P49790 1475 aaKnown RBP21.92■■□□□ 1.1
CDC42SE2-202ENST00000395246 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
CDC42SE2-202ENST00000395246 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
CDC42SE2-202ENST00000395246 CCNB3Q8WWL7 1395 aa21.85■■□□□ 1.09
CDC42SE2-202ENST00000395246 PHLDB1Q86UU1 1377 aa21.84■■□□□ 1.09
CDC42SE2-202ENST00000395246 ITSN2Q9NZM3 1697 aa21.83■■□□□ 1.09
CDC42SE2-202ENST00000395246 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.09
CDC42SE2-202ENST00000395246 AKNAQ7Z591 1439 aa21.81■■□□□ 1.08
CDC42SE2-202ENST00000395246 MIA2Q96PC5 1412 aa21.81■■□□□ 1.08
CDC42SE2-202ENST00000395246 NCOA2Q15596 1464 aa21.8■■□□□ 1.08
CDC42SE2-202ENST00000395246 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
CDC42SE2-202ENST00000395246 PTPN23Q9H3S7 1636 aa21.8■■□□□ 1.08
CDC42SE2-202ENST00000395246 UHRF1BP1LA0JNW5 1464 aa21.8■■□□□ 1.08
CDC42SE2-202ENST00000395246 CROCC2H7BZ55 1655 aa21.78■■□□□ 1.08
CDC42SE2-202ENST00000395246 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
CDC42SE2-202ENST00000395246 FGD6Q6ZV73 1430 aa21.78■■□□□ 1.08
CDC42SE2-202ENST00000395246 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
CDC42SE2-202ENST00000395246 APLP2Q06481 763 aa21.75■■□□□ 1.07
CDC42SE2-202ENST00000395246 CDK13Q14004 1512 aaKnown RBP21.72■■□□□ 1.07
CDC42SE2-202ENST00000395246 DNMT1P26358 1616 aaKnown RBP21.71■■□□□ 1.07
CDC42SE2-202ENST00000395246 KDM5BQ9UGL1 1544 aa21.7■■□□□ 1.06
CDC42SE2-202ENST00000395246 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.06
CDC42SE2-202ENST00000395246 ABCC10Q5T3U5 1492 aa21.68■■□□□ 1.06
CDC42SE2-202ENST00000395246 ABCC2Q92887 1545 aa21.67■■□□□ 1.06
CDC42SE2-202ENST00000395246 ADGBQ8N7X0 1667 aa21.66■■□□□ 1.06
CDC42SE2-202ENST00000395246 TROQ12816 1431 aaPredicted RBP21.65■■□□□ 1.06
CDC42SE2-202ENST00000395246 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
CDC42SE2-202ENST00000395246 PLB1Q6P1J6 1458 aa21.63■■□□□ 1.05
CDC42SE2-202ENST00000395246 PREX2Q70Z35 1606 aa21.62■■□□□ 1.05
CDC42SE2-202ENST00000395246 KIF14Q15058 1648 aa21.62■■□□□ 1.05
CDC42SE2-202ENST00000395246 JPH4Q96JJ6 628 aa21.61■■□□□ 1.05
CDC42SE2-202ENST00000395246 ATP10BO94823 1461 aa21.61■■□□□ 1.05
CDC42SE2-202ENST00000395246 HFM1A2PYH4 1435 aa21.6■■□□□ 1.05
CDC42SE2-202ENST00000395246 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
CDC42SE2-202ENST00000395246 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
CDC42SE2-202ENST00000395246 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
CDC42SE2-202ENST00000395246 ARAP3Q8WWN8 1544 aa21.58■■□□□ 1.05
CDC42SE2-202ENST00000395246 ERCC6L2Q5T890 1561 aa21.58■■□□□ 1.04
CDC42SE2-202ENST00000395246 ADGRL2O95490 1459 aa21.56■■□□□ 1.04
CDC42SE2-202ENST00000395246 MAPKBP1O60336 1514 aa21.56■■□□□ 1.04
CDC42SE2-202ENST00000395246 MTUS2Q5JR59 1369 aa21.56■■□□□ 1.04
CDC42SE2-202ENST00000395246 CDC42BPBQ9Y5S2 1711 aa21.55■■□□□ 1.04
CDC42SE2-202ENST00000395246 ZCCHC11Q5TAX3 1644 aaKnown RBP21.55■■□□□ 1.04
CDC42SE2-202ENST00000395246 DHX57Q6P158 1386 aaKnown RBP21.55■■□□□ 1.04
CDC42SE2-202ENST00000395246 MAST1Q9Y2H9 1570 aa21.55■■□□□ 1.04
CDC42SE2-202ENST00000395246 SHANK2Q9UPX8 1470 aa21.55■■□□□ 1.04
CDC42SE2-202ENST00000395246 ROCK1Q13464 1354 aa21.54■■□□□ 1.04
CDC42SE2-202ENST00000395246 UACAQ9BZF9 1416 aa21.53■■□□□ 1.04
CDC42SE2-202ENST00000395246 PTPRKQ15262 1439 aa21.52■■□□□ 1.04
CDC42SE2-202ENST00000395246 GPATCH8Q9UKJ3 1502 aaKnown RBP21.52■■□□□ 1.03
CDC42SE2-202ENST00000395246 SETD5Q9C0A6 1442 aa21.52■■□□□ 1.03
CDC42SE2-202ENST00000395246 P3H3Q8IVL6 736 aa21.49■■□□□ 1.03
CDC42SE2-202ENST00000395246 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
CDC42SE2-202ENST00000395246 MYO5CQ9NQX4 1742 aa21.46■■□□□ 1.03
CDC42SE2-202ENST00000395246 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
CDC42SE2-202ENST00000395246 NAIPQ13075 1403 aa21.45■■□□□ 1.02
CDC42SE2-202ENST00000395246 PTPRGP23470 1445 aa21.44■■□□□ 1.02
CDC42SE2-202ENST00000395246 KDM5DQ9BY66 1539 aa21.41■■□□□ 1.02
CDC42SE2-202ENST00000395246 CAMSAP2Q08AD1 1489 aa21.41■■□□□ 1.02
CDC42SE2-202ENST00000395246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms