RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 IGF1RP08069 1367 aa33.67■■■□□ 2.98
COL11A2-204ENST00000395194 CUL7Q14999 1698 aa33.67■■■□□ 2.98
COL11A2-204ENST00000395194 KIF13AQ9H1H9 1805 aa33.6■■■□□ 2.97
COL11A2-204ENST00000395194 KIAA0586Q9BVV6 1533 aa33.56■■■□□ 2.96
COL11A2-204ENST00000395194 ADCY10Q96PN6 1610 aa33.48■■■□□ 2.95
COL11A2-204ENST00000395194 CARMIL1Q5VZK9 1371 aa33.47■■■□□ 2.95
COL11A2-204ENST00000395194 NPM1P06748 294 aaKnown RBP eCLIP33.4■■■□□ 2.94
COL11A2-204ENST00000395194 TTBK1Q5TCY1 1321 aaPredicted RBP33.36■■■□□ 2.93
COL11A2-204ENST00000395194 MAPKBP1O60336 1514 aa33.36■■■□□ 2.93
COL11A2-204ENST00000395194 ABCC10Q5T3U5 1492 aa33.33■■■□□ 2.93
COL11A2-204ENST00000395194 FAM69CQ0P6D2 419 aa33.33■■■□□ 2.93
COL11A2-204ENST00000395194 AEBP2Q6ZN18 517 aaPredicted RBP33.32■■■□□ 2.92
COL11A2-204ENST00000395194 DIP2BQ9P265 1576 aa33.31■■■□□ 2.92
COL11A2-204ENST00000395194 IQGAP2Q13576 1575 aa33.3■■■□□ 2.92
COL11A2-204ENST00000395194 PTPRGP23470 1445 aa33.27■■■□□ 2.92
COL11A2-204ENST00000395194 CARMIL2Q6F5E8 1435 aa33.23■■■□□ 2.91
COL11A2-204ENST00000395194 TSPOAP1O95153 1857 aa33.22■■■□□ 2.91
COL11A2-204ENST00000395194 TNIKQ9UKE5 1360 aa33.2■■■□□ 2.9
COL11A2-204ENST00000395194 RAPGEF2Q9Y4G8 1499 aa33.17■■■□□ 2.9
COL11A2-204ENST00000395194 DISP1Q96F81 1524 aa33.12■■■□□ 2.89
COL11A2-204ENST00000395194 ABCC2Q92887 1545 aa33.1■■■□□ 2.89
COL11A2-204ENST00000395194 UGGT2Q9NYU1 1516 aa33.05■■■□□ 2.88
COL11A2-204ENST00000395194 KDM6BO15054 1643 aa33.04■■■□□ 2.88
COL11A2-204ENST00000395194 KIAA0556O60303 1618 aa33.02■■■□□ 2.88
COL11A2-204ENST00000395194 UACAQ9BZF9 1416 aa33.02■■■□□ 2.88
COL11A2-204ENST00000395194 CTTNBP2Q8WZ74 1663 aa33.01■■■□□ 2.88
COL11A2-204ENST00000395194 ASXL2Q76L83 1435 aa33■■■□□ 2.87
COL11A2-204ENST00000395194 UHRF1BP1LA0JNW5 1464 aa32.99■■■□□ 2.87
COL11A2-204ENST00000395194 PLB1Q6P1J6 1458 aa32.94■■■□□ 2.86
COL11A2-204ENST00000395194 ZCCHC11Q5TAX3 1644 aaKnown RBP32.91■■■□□ 2.86
COL11A2-204ENST00000395194 PPRC1Q5VV67 1664 aaKnown RBP32.9■■■□□ 2.86
COL11A2-204ENST00000395194 GLI2P10070 1586 aa32.87■■■□□ 2.85
COL11A2-204ENST00000395194 KDM5BQ9UGL1 1544 aa32.87■■■□□ 2.85
COL11A2-204ENST00000395194 PRXQ9BXM0 1461 aa32.81■■■□□ 2.84
COL11A2-204ENST00000395194 EPRSP07814 1512 aaKnown RBP32.8■■■□□ 2.84
COL11A2-204ENST00000395194 GOLGA3Q08378 1498 aa32.76■■■□□ 2.84
COL11A2-204ENST00000395194 MAP3K4Q9Y6R4 1608 aa32.76■■■□□ 2.83
COL11A2-204ENST00000395194 ABCA8O94911 1581 aa32.69■■■□□ 2.82
COL11A2-204ENST00000395194 WDR7Q9Y4E6 1490 aa32.67■■■□□ 2.82
COL11A2-204ENST00000395194 KDM4FA0A1W2PPD8 638 aa32.65■■■□□ 2.82
COL11A2-204ENST00000395194 COL17A1Q9UMD9 1497 aaPredicted RBP32.62■■■□□ 2.81
COL11A2-204ENST00000395194 TEX14Q8IWB6 1497 aa32.61■■■□□ 2.81
COL11A2-204ENST00000395194 P3H3Q8IVL6 736 aa32.6■■■□□ 2.81
COL11A2-204ENST00000395194 ARID3CA6NKF2 412 aa32.55■■■□□ 2.8
COL11A2-204ENST00000395194 CSRNP3Q8WYN3 585 aa32.55■■■□□ 2.8
COL11A2-204ENST00000395194 KCNH8Q96L42 1107 aa32.55■■■□□ 2.8
COL11A2-204ENST00000395194 CFAP43Q8NDM7 1665 aa32.52■■■□□ 2.8
COL11A2-204ENST00000395194 SAMD9Q5K651 1589 aa32.47■■■□□ 2.79
COL11A2-204ENST00000395194 CD109Q6YHK3 1445 aa32.47■■■□□ 2.79
COL11A2-204ENST00000395194 ADGRL1O94910 1474 aa32.44■■■□□ 2.78
COL11A2-204ENST00000395194 RANGAP1P46060 587 aaPredicted RBP32.42■■■□□ 2.78
COL11A2-204ENST00000395194 FAM9AQ8IZU1 332 aaPredicted RBP32.41■■■□□ 2.78
COL11A2-204ENST00000395194 MAGI3Q5TCQ9 1506 aa32.41■■■□□ 2.78
COL11A2-204ENST00000395194 ATP10BO94823 1461 aa32.4■■■□□ 2.78
COL11A2-204ENST00000395194 EEA1Q15075 1411 aa32.38■■■□□ 2.77
COL11A2-204ENST00000395194 RAPGEF6Q8TEU7 1601 aa32.37■■■□□ 2.77
COL11A2-204ENST00000395194 FHOD3Q2V2M9 1422 aa32.29■■■□□ 2.76
COL11A2-204ENST00000395194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.26■■■□□ 2.75
COL11A2-204ENST00000395194 HNRNPUL2Q1KMD3 747 aaKnown RBP32.26■■■□□ 2.75
COL11A2-204ENST00000395194 ABCA9Q8IUA7 1624 aa32.25■■■□□ 2.75
COL11A2-204ENST00000395194 NUP153P49790 1475 aaKnown RBP32.23■■■□□ 2.75
COL11A2-204ENST00000395194 KIF21BO75037 1637 aa32.22■■■□□ 2.75
COL11A2-204ENST00000395194 EHMT2Q96KQ7 1210 aa32.17■■■□□ 2.74
COL11A2-204ENST00000395194 ARAP3Q8WWN8 1544 aa32.16■■■□□ 2.74
COL11A2-204ENST00000395194 EFCAB5A4FU69 1503 aa32.1■■■□□ 2.73
COL11A2-204ENST00000395194 RAPGEF3O95398 923 aa32.04■■■□□ 2.72
COL11A2-204ENST00000395194 NEO1Q92859 1461 aa32.03■■■□□ 2.72
COL11A2-204ENST00000395194 HECW2Q9P2P5 1572 aa32.02■■■□□ 2.72
COL11A2-204ENST00000395194 PHLDB1Q86UU1 1377 aa32.01■■■□□ 2.71
COL11A2-204ENST00000395194 FRMPD1Q5SYB0 1578 aa31.99■■■□□ 2.71
COL11A2-204ENST00000395194 PLEKHD1A6NEE1 506 aa31.99■■■□□ 2.71
COL11A2-204ENST00000395194 UBTFP17480 764 aaKnown RBP31.99■■■□□ 2.71
COL11A2-204ENST00000395194 CHIC1Q5VXU3 224 aa31.99■■■□□ 2.71
COL11A2-204ENST00000395194 CDK13Q14004 1512 aaKnown RBP31.98■■■□□ 2.71
COL11A2-204ENST00000395194 TTC37Q6PGP7 1564 aa31.95■■■□□ 2.71
COL11A2-204ENST00000395194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.94■■■□□ 2.7
COL11A2-204ENST00000395194 ATP1B4Q9UN42 357 aaPredicted RBP31.88■■■□□ 2.69
COL11A2-204ENST00000395194 RICTORQ6R327 1708 aa31.87■■■□□ 2.69
COL11A2-204ENST00000395194 FANCAO15360 1455 aa31.87■■■□□ 2.69
COL11A2-204ENST00000395194 CFAP74Q9C0B2 1584 aa31.86■■■□□ 2.69
COL11A2-204ENST00000395194 ARHGAP35Q9NRY4 1499 aa31.86■■■□□ 2.69
COL11A2-204ENST00000395194 AKNAQ7Z591 1439 aa31.85■■■□□ 2.69
COL11A2-204ENST00000395194 ADAMTSL3P82987 1691 aa31.85■■■□□ 2.69
COL11A2-204ENST00000395194 DENND4BO75064 1496 aaPredicted RBP31.84■■■□□ 2.69
COL11A2-204ENST00000395194 HECW1Q76N89 1606 aa31.83■■■□□ 2.69
COL11A2-204ENST00000395194 ARHGEF40Q8TER5 1519 aa31.81■■■□□ 2.68
COL11A2-204ENST00000395194 BCORL1Q5H9F3 1711 aa31.81■■■□□ 2.68
COL11A2-204ENST00000395194 FMN1Q68DA7 1419 aa31.81■■■□□ 2.68
COL11A2-204ENST00000395194 ARID4BQ4LE39 1312 aaPredicted RBP31.8■■■□□ 2.68
COL11A2-204ENST00000395194 MADDQ8WXG6 1647 aa31.77■■■□□ 2.68
COL11A2-204ENST00000395194 PTPRMP28827 1452 aa31.76■■■□□ 2.67
COL11A2-204ENST00000395194 LRRIQ1Q96JM4 1722 aa31.73■■■□□ 2.67
COL11A2-204ENST00000395194 MYO5CQ9NQX4 1742 aa31.72■■■□□ 2.67
COL11A2-204ENST00000395194 KIF14Q15058 1648 aa31.71■■■□□ 2.67
COL11A2-204ENST00000395194 ZMYM4Q5VZL5 1548 aa31.7■■■□□ 2.66
COL11A2-204ENST00000395194 ILDR1Q86SU0 546 aaPredicted RBP31.69■■■□□ 2.66
COL11A2-204ENST00000395194 RIMS1Q86UR5 1692 aaKnown RBP31.68■■■□□ 2.66
COL11A2-204ENST00000395194 PLCH2O75038 1416 aa31.67■■■□□ 2.66
COL11A2-204ENST00000395194 YEATS2Q9ULM3 1422 aa31.67■■■□□ 2.66
COL11A2-204ENST00000395194 ZFYVE16Q7Z3T8 1539 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms