RNA–Protein interactions for RNA: ENST00000395047.6

VDAC1-203, Transcript of voltage dependent anion channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDAC1, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-203ENST00000395047 GOLGA3Q08378 1498 aa35.2■■■■□ 3.23
VDAC1-203ENST00000395047 KIAA0586Q9BVV6 1533 aa35.2■■■■□ 3.23
VDAC1-203ENST00000395047 UBTFP17480 764 aaKnown RBP35.2■■■■□ 3.22
VDAC1-203ENST00000395047 DNAJC5Q9H3Z4 198 aa35.17■■■■□ 3.22
VDAC1-203ENST00000395047 IQGAP2Q13576 1575 aa35.14■■■■□ 3.22
VDAC1-203ENST00000395047 JPH4Q96JJ6 628 aa35.12■■■■□ 3.21
VDAC1-203ENST00000395047 RANGAP1P46060 587 aaPredicted RBP35.09■■■■□ 3.21
VDAC1-203ENST00000395047 LOC105371045A0A1W2PR82 267 aa35.07■■■■□ 3.21
VDAC1-203ENST00000395047 SHROOM2Q13796 1616 aa35.06■■■■□ 3.2
VDAC1-203ENST00000395047 ERCC6L2Q5T890 1561 aa35.02■■■■□ 3.2
VDAC1-203ENST00000395047 ARHGEF11O15085 1522 aa35■■■■□ 3.19
VDAC1-203ENST00000395047 PRG4Q92954 1404 aaPredicted RBP35■■■■□ 3.19
VDAC1-203ENST00000395047 RIMBP3CA6NJZ7 1639 aa34.98■■■■□ 3.19
VDAC1-203ENST00000395047 RIMBP3BA6NNM3 1639 aa34.98■■■■□ 3.19
VDAC1-203ENST00000395047 RIMBP3Q9UFD9 1639 aa34.98■■■■□ 3.19
VDAC1-203ENST00000395047 UGGT2Q9NYU1 1516 aa34.9■■■■□ 3.18
VDAC1-203ENST00000395047 TTBK1Q5TCY1 1321 aaPredicted RBP34.88■■■■□ 3.17
VDAC1-203ENST00000395047 P3H3Q8IVL6 736 aa34.84■■■■□ 3.17
VDAC1-203ENST00000395047 DISP1Q96F81 1524 aa34.84■■■■□ 3.17
VDAC1-203ENST00000395047 TNIKQ9UKE5 1360 aa34.83■■■■□ 3.17
VDAC1-203ENST00000395047 CARMIL2Q6F5E8 1435 aa34.83■■■■□ 3.17
VDAC1-203ENST00000395047 KIAA0556O60303 1618 aa34.8■■■■□ 3.16
VDAC1-203ENST00000395047 ARAP1Q96P48 1450 aa34.76■■■■□ 3.16
VDAC1-203ENST00000395047 CYB5RLQ6IPT4 315 aa34.75■■■■□ 3.15
VDAC1-203ENST00000395047 SAMD9Q5K651 1589 aa34.72■■■■□ 3.15
VDAC1-203ENST00000395047 FHOD3Q2V2M9 1422 aa34.64■■■■□ 3.14
VDAC1-203ENST00000395047 EFCAB5A4FU69 1503 aa34.64■■■■□ 3.14
VDAC1-203ENST00000395047 PTPRGP23470 1445 aa34.64■■■■□ 3.14
VDAC1-203ENST00000395047 ARHGAP35Q9NRY4 1499 aa34.63■■■■□ 3.13
VDAC1-203ENST00000395047 CLIP1P30622 1438 aa34.62■■■■□ 3.13
VDAC1-203ENST00000395047 CEP162Q5TB80 1403 aa34.61■■■■□ 3.13
VDAC1-203ENST00000395047 PLB1Q6P1J6 1458 aa34.46■■■■□ 3.11
VDAC1-203ENST00000395047 ADCY10Q96PN6 1610 aa34.41■■■■□ 3.1
VDAC1-203ENST00000395047 UACAQ9BZF9 1416 aa34.41■■■■□ 3.1
VDAC1-203ENST00000395047 ARID3CA6NKF2 412 aa34.35■■■■□ 3.09
VDAC1-203ENST00000395047 ABCA8O94911 1581 aa34.35■■■■□ 3.09
VDAC1-203ENST00000395047 FMN1Q68DA7 1419 aa34.33■■■■□ 3.09
VDAC1-203ENST00000395047 RAPGEF6Q8TEU7 1601 aa34.33■■■■□ 3.09
VDAC1-203ENST00000395047 ATP1B4Q9UN42 357 aaPredicted RBP34.33■■■■□ 3.09
VDAC1-203ENST00000395047 ABCC2Q92887 1545 aa34.33■■■■□ 3.09
VDAC1-203ENST00000395047 UHRF1BP1LA0JNW5 1464 aa34.26■■■■□ 3.07
VDAC1-203ENST00000395047 NPM1P06748 294 aaKnown RBP eCLIP34.24■■■■□ 3.07
VDAC1-203ENST00000395047 PCF11O94913 1555 aaKnown RBP34.23■■■■□ 3.07
VDAC1-203ENST00000395047 NUP153P49790 1475 aaKnown RBP34.19■■■■□ 3.06
VDAC1-203ENST00000395047 ZCCHC11Q5TAX3 1644 aaKnown RBP34.18■■■■□ 3.06
VDAC1-203ENST00000395047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.17■■■■□ 3.06
VDAC1-203ENST00000395047 HNRNPUL2Q1KMD3 747 aaKnown RBP34.17■■■■□ 3.06
VDAC1-203ENST00000395047 HECW1Q76N89 1606 aa34.15■■■■□ 3.06
VDAC1-203ENST00000395047 KDM5BQ9UGL1 1544 aa34.13■■■■□ 3.05
VDAC1-203ENST00000395047 LRRIQ1Q96JM4 1722 aa34.13■■■■□ 3.05
VDAC1-203ENST00000395047 CASKIN1Q8WXD9 1431 aa34.13■■■■□ 3.05
VDAC1-203ENST00000395047 VPS8Q8N3P4 1428 aa34.11■■■■□ 3.05
VDAC1-203ENST00000395047 ATP10BO94823 1461 aa34.1■■■■□ 3.05
VDAC1-203ENST00000395047 CDK13Q14004 1512 aaKnown RBP34.09■■■■□ 3.05
VDAC1-203ENST00000395047 FYCO1Q9BQS8 1478 aa34.08■■■■□ 3.05
VDAC1-203ENST00000395047 EPRSP07814 1512 aaKnown RBP34.05■■■■□ 3.04
VDAC1-203ENST00000395047 ASXL2Q76L83 1435 aa33.99■■■■□ 3.03
VDAC1-203ENST00000395047 MAPKBP1O60336 1514 aa33.98■■■■□ 3.03
VDAC1-203ENST00000395047 CCDC18Q5T9S5 1454 aa33.92■■■■□ 3.02
VDAC1-203ENST00000395047 KCNH8Q96L42 1107 aa33.91■■■■□ 3.02
VDAC1-203ENST00000395047 TRHP20396 242 aaPredicted RBP33.9■■■■□ 3.02
VDAC1-203ENST00000395047 WDR7Q9Y4E6 1490 aa33.89■■■■□ 3.02
VDAC1-203ENST00000395047 PLEKHD1A6NEE1 506 aa33.88■■■■□ 3.01
VDAC1-203ENST00000395047 CDK11AQ9UQ88 783 aaPredicted RBP33.83■■■■□ 3.01
VDAC1-203ENST00000395047 APLP2Q06481 763 aa33.8■■■■□ 3
VDAC1-203ENST00000395047 KIF13AQ9H1H9 1805 aa33.8■■■■□ 3
VDAC1-203ENST00000395047 CFAP43Q8NDM7 1665 aa33.8■■■■□ 3
VDAC1-203ENST00000395047 FAM69CQ0P6D2 419 aa33.8■■■■□ 3
VDAC1-203ENST00000395047 MAGI3Q5TCQ9 1506 aa33.79■■■■□ 3
VDAC1-203ENST00000395047 TIAM1Q13009 1591 aa33.79■■■■□ 3
VDAC1-203ENST00000395047 DIP2BQ9P265 1576 aa33.79■■■■□ 3
VDAC1-203ENST00000395047 ABCC10Q5T3U5 1492 aa33.78■■■■□ 3
VDAC1-203ENST00000395047 MTUS2Q5JR59 1369 aa33.72■■■□□ 2.99
VDAC1-203ENST00000395047 TROQ12816 1431 aaPredicted RBP33.72■■■□□ 2.99
VDAC1-203ENST00000395047 KIF14Q15058 1648 aa33.69■■■□□ 2.98
VDAC1-203ENST00000395047 KANK4Q5T7N3 995 aaPredicted RBP33.69■■■□□ 2.98
VDAC1-203ENST00000395047 TSPOAP1O95153 1857 aa33.69■■■□□ 2.98
VDAC1-203ENST00000395047 MAP3K1Q13233 1512 aa33.64■■■□□ 2.98
VDAC1-203ENST00000395047 PPARGC1BQ86YN6 1023 aaKnown RBP33.63■■■□□ 2.97
VDAC1-203ENST00000395047 GLI2P10070 1586 aa33.62■■■□□ 2.97
VDAC1-203ENST00000395047 LRRC9Q6ZRR7 1453 aa33.62■■■□□ 2.97
VDAC1-203ENST00000395047 EHBP1L1Q8N3D4 1523 aa33.62■■■□□ 2.97
VDAC1-203ENST00000395047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.61■■■□□ 2.972e-22■□□□□ 9.3
VDAC1-203ENST00000395047 TTC37Q6PGP7 1564 aa33.6■■■□□ 2.97
VDAC1-203ENST00000395047 ABCA9Q8IUA7 1624 aa33.59■■■□□ 2.97
VDAC1-203ENST00000395047 MAP3K4Q9Y6R4 1608 aa33.58■■■□□ 2.97
VDAC1-203ENST00000395047 CD109Q6YHK3 1445 aa33.54■■■□□ 2.96
VDAC1-203ENST00000395047 SUPT6HQ7KZ85 1726 aaKnown RBP33.52■■■□□ 2.96
VDAC1-203ENST00000395047 MYO5CQ9NQX4 1742 aa33.47■■■□□ 2.95
VDAC1-203ENST00000395047 PPRC1Q5VV67 1664 aaKnown RBP33.47■■■□□ 2.95
VDAC1-203ENST00000395047 NCOA2Q15596 1464 aa33.46■■■□□ 2.95
VDAC1-203ENST00000395047 CDC42BPAQ5VT25 1732 aa33.43■■■□□ 2.94
VDAC1-203ENST00000395047 CCNB3Q8WWL7 1395 aa33.41■■■□□ 2.94
VDAC1-203ENST00000395047 CDC42BPBQ9Y5S2 1711 aa33.39■■■□□ 2.94
VDAC1-203ENST00000395047 PLCH2O75038 1416 aa33.36■■■□□ 2.93
VDAC1-203ENST00000395047 PREX2Q70Z35 1606 aa33.36■■■□□ 2.93
VDAC1-203ENST00000395047 ARHGAP5Q13017 1502 aa33.36■■■□□ 2.93
VDAC1-203ENST00000395047 GPATCH8Q9UKJ3 1502 aaKnown RBP33.35■■■□□ 2.93
VDAC1-203ENST00000395047 TEX14Q8IWB6 1497 aa33.33■■■□□ 2.93
VDAC1-203ENST00000395047 FANCAO15360 1455 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms