RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 GLI2P10070 1586 aa11.23□□□□□ -0.61
SMARCAD1-203ENST00000394961 UHRF1BP1LA0JNW5 1464 aa11.22□□□□□ -0.61
SMARCAD1-203ENST00000394961 KIF27Q86VH2 1401 aa11.21□□□□□ -0.61
SMARCAD1-203ENST00000394961 FBLN2P98095 1184 aa11.21□□□□□ -0.61
SMARCAD1-203ENST00000394961 ABCC10Q5T3U5 1492 aa11.2□□□□□ -0.62
SMARCAD1-203ENST00000394961 CTTNBP2Q8WZ74 1663 aa11.2□□□□□ -0.62
SMARCAD1-203ENST00000394961 PRG4Q92954 1404 aaPredicted RBP11.19□□□□□ -0.62
SMARCAD1-203ENST00000394961 UGGT2Q9NYU1 1516 aa11.18□□□□□ -0.62
SMARCAD1-203ENST00000394961 IQGAP2Q13576 1575 aa11.18□□□□□ -0.62
SMARCAD1-203ENST00000394961 IGF1RP08069 1367 aa11.18□□□□□ -0.62
SMARCAD1-203ENST00000394961 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
SMARCAD1-203ENST00000394961 MAP3K4Q9Y6R4 1608 aa11.13□□□□□ -0.63
SMARCAD1-203ENST00000394961 KIAA0556O60303 1618 aa11.11□□□□□ -0.63
SMARCAD1-203ENST00000394961 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
SMARCAD1-203ENST00000394961 ABCC2Q92887 1545 aa11.1□□□□□ -0.63
SMARCAD1-203ENST00000394961 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
SMARCAD1-203ENST00000394961 KDM5BQ9UGL1 1544 aa11.09□□□□□ -0.63
SMARCAD1-203ENST00000394961 CARMIL2Q6F5E8 1435 aa11.07□□□□□ -0.64
SMARCAD1-203ENST00000394961 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
SMARCAD1-203ENST00000394961 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
SMARCAD1-203ENST00000394961 TNIKQ9UKE5 1360 aa11.07□□□□□ -0.64
SMARCAD1-203ENST00000394961 PLB1Q6P1J6 1458 aa11.07□□□□□ -0.64
SMARCAD1-203ENST00000394961 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
SMARCAD1-203ENST00000394961 ZCCHC11Q5TAX3 1644 aaKnown RBP11.07□□□□□ -0.64
SMARCAD1-203ENST00000394961 CFAP43Q8NDM7 1665 aa11.07□□□□□ -0.64
SMARCAD1-203ENST00000394961 CARMIL1Q5VZK9 1371 aa11.06□□□□□ -0.64
SMARCAD1-203ENST00000394961 KDM6BO15054 1643 aa11.06□□□□□ -0.64
SMARCAD1-203ENST00000394961 ABCA8O94911 1581 aa11.04□□□□□ -0.64
SMARCAD1-203ENST00000394961 GOLGA3Q08378 1498 aa11.02□□□□□ -0.65
SMARCAD1-203ENST00000394961 SAMD9Q5K651 1589 aa11.01□□□□□ -0.65
SMARCAD1-203ENST00000394961 PRXQ9BXM0 1461 aa11.01□□□□□ -0.65
SMARCAD1-203ENST00000394961 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
SMARCAD1-203ENST00000394961 PTPRGP23470 1445 aa11□□□□□ -0.65
SMARCAD1-203ENST00000394961 EPRSP07814 1512 aaKnown RBP10.98□□□□□ -0.65
SMARCAD1-203ENST00000394961 TEX14Q8IWB6 1497 aa10.98□□□□□ -0.65
SMARCAD1-203ENST00000394961 TSPOAP1O95153 1857 aa10.97□□□□□ -0.65
SMARCAD1-203ENST00000394961 MAGI3Q5TCQ9 1506 aa10.97□□□□□ -0.65
SMARCAD1-203ENST00000394961 ASXL2Q76L83 1435 aa10.96□□□□□ -0.66
SMARCAD1-203ENST00000394961 ABCA9Q8IUA7 1624 aa10.93□□□□□ -0.66
SMARCAD1-203ENST00000394961 EEA1Q15075 1411 aa10.93□□□□□ -0.66
SMARCAD1-203ENST00000394961 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMARCAD1-203ENST00000394961 WDR7Q9Y4E6 1490 aa10.93□□□□□ -0.66
SMARCAD1-203ENST00000394961 KIF21BO75037 1637 aa10.9□□□□□ -0.66
SMARCAD1-203ENST00000394961 ARAP3Q8WWN8 1544 aa10.89□□□□□ -0.67
SMARCAD1-203ENST00000394961 RAPGEF6Q8TEU7 1601 aa10.88□□□□□ -0.67
SMARCAD1-203ENST00000394961 PHLDB1Q86UU1 1377 aa10.88□□□□□ -0.67
SMARCAD1-203ENST00000394961 CFAP74Q9C0B2 1584 aa10.88□□□□□ -0.67
SMARCAD1-203ENST00000394961 FAM69CQ0P6D2 419 aa10.88□□□□□ -0.67
SMARCAD1-203ENST00000394961 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
SMARCAD1-203ENST00000394961 NEO1Q92859 1461 aa10.82□□□□□ -0.68
SMARCAD1-203ENST00000394961 ADAMTSL3P82987 1691 aa10.81□□□□□ -0.68
SMARCAD1-203ENST00000394961 COL17A1Q9UMD9 1497 aaPredicted RBP10.8□□□□□ -0.68
SMARCAD1-203ENST00000394961 FRMPD1Q5SYB0 1578 aa10.8□□□□□ -0.68
SMARCAD1-203ENST00000394961 RICTORQ6R327 1708 aa10.8□□□□□ -0.68
SMARCAD1-203ENST00000394961 ZMYM4Q5VZL5 1548 aa10.8□□□□□ -0.68
SMARCAD1-203ENST00000394961 AEBP2Q6ZN18 517 aaPredicted RBP10.79□□□□□ -0.68
SMARCAD1-203ENST00000394961 ADGRL1O94910 1474 aa10.79□□□□□ -0.68
SMARCAD1-203ENST00000394961 ATP10BO94823 1461 aa10.78□□□□□ -0.68
SMARCAD1-203ENST00000394961 BCORL1Q5H9F3 1711 aa10.76□□□□□ -0.69
SMARCAD1-203ENST00000394961 CD109Q6YHK3 1445 aa10.75□□□□□ -0.69
SMARCAD1-203ENST00000394961 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
SMARCAD1-203ENST00000394961 ARHGEF40Q8TER5 1519 aa10.75□□□□□ -0.69
SMARCAD1-203ENST00000394961 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
SMARCAD1-203ENST00000394961 HECW1Q76N89 1606 aa10.71□□□□□ -0.69
SMARCAD1-203ENST00000394961 REREQ9P2R6 1566 aa10.71□□□□□ -0.69
SMARCAD1-203ENST00000394961 MYO5CQ9NQX4 1742 aa10.7□□□□□ -0.7
SMARCAD1-203ENST00000394961 MAGI2Q86UL8 1455 aa10.7□□□□□ -0.7
SMARCAD1-203ENST00000394961 HECW2Q9P2P5 1572 aa10.69□□□□□ -0.7
SMARCAD1-203ENST00000394961 FHOD3Q2V2M9 1422 aa10.69□□□□□ -0.7
SMARCAD1-203ENST00000394961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMARCAD1-203ENST00000394961 LRRIQ1Q96JM4 1722 aa10.68□□□□□ -0.7
SMARCAD1-203ENST00000394961 CSRNP3Q8WYN3 585 aa10.67□□□□□ -0.7
SMARCAD1-203ENST00000394961 TTC37Q6PGP7 1564 aa10.67□□□□□ -0.7
SMARCAD1-203ENST00000394961 KDM5CP41229 1560 aa10.65□□□□□ -0.71
SMARCAD1-203ENST00000394961 FAM9AQ8IZU1 332 aaPredicted RBP10.64□□□□□ -0.71
SMARCAD1-203ENST00000394961 PREX2Q70Z35 1606 aa10.62□□□□□ -0.71
SMARCAD1-203ENST00000394961 KIF14Q15058 1648 aa10.62□□□□□ -0.71
SMARCAD1-203ENST00000394961 SIGLEC1Q9BZZ2 1709 aa10.62□□□□□ -0.71
SMARCAD1-203ENST00000394961 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
SMARCAD1-203ENST00000394961 MADDQ8WXG6 1647 aa10.61□□□□□ -0.71
SMARCAD1-203ENST00000394961 ITSN2Q9NZM3 1697 aa10.61□□□□□ -0.71
SMARCAD1-203ENST00000394961 FER1L4A9Z1Z3 1794 aa10.6□□□□□ -0.71
SMARCAD1-203ENST00000394961 ZFYVE16Q7Z3T8 1539 aa10.6□□□□□ -0.71
SMARCAD1-203ENST00000394961 CDC42BPBQ9Y5S2 1711 aa10.6□□□□□ -0.71
SMARCAD1-203ENST00000394961 DENND4BO75064 1496 aaPredicted RBP10.6□□□□□ -0.71
SMARCAD1-203ENST00000394961 ARHGEF12Q9NZN5 1544 aa10.59□□□□□ -0.71
SMARCAD1-203ENST00000394961 CCDC18Q5T9S5 1454 aa10.59□□□□□ -0.71
SMARCAD1-203ENST00000394961 PLCH2O75038 1416 aa10.59□□□□□ -0.71
SMARCAD1-203ENST00000394961 FANCAO15360 1455 aa10.58□□□□□ -0.72
SMARCAD1-203ENST00000394961 ARHGAP35Q9NRY4 1499 aa10.58□□□□□ -0.72
SMARCAD1-203ENST00000394961 AKNAQ7Z591 1439 aa10.58□□□□□ -0.72
SMARCAD1-203ENST00000394961 MROH2AA6NES4 1674 aa10.58□□□□□ -0.72
SMARCAD1-203ENST00000394961 PTPRMP28827 1452 aa10.58□□□□□ -0.72
SMARCAD1-203ENST00000394961 PREX1Q8TCU6 1659 aa10.58□□□□□ -0.72
SMARCAD1-203ENST00000394961 RIMS1Q86UR5 1692 aaKnown RBP10.57□□□□□ -0.72
SMARCAD1-203ENST00000394961 POGZQ7Z3K3 1410 aa10.57□□□□□ -0.72
SMARCAD1-203ENST00000394961 PCF11O94913 1555 aaKnown RBP10.57□□□□□ -0.72
SMARCAD1-203ENST00000394961 AGLP35573 1532 aa10.57□□□□□ -0.72
SMARCAD1-203ENST00000394961 CDC42BPAQ5VT25 1732 aa10.56□□□□□ -0.72
SMARCAD1-203ENST00000394961 ABCC1P33527 1531 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms