RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
SMARCAD1-203ENST00000394961 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
SMARCAD1-203ENST00000394961 ABCC9O60706 1549 aa14.28□□□□□ -0.12
SMARCAD1-203ENST00000394961 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
SMARCAD1-203ENST00000394961 NACADO15069 1562 aa13.93□□□□□ -0.18
SMARCAD1-203ENST00000394961 MYO15BQ96JP2 1530 aa13.92□□□□□ -0.18
SMARCAD1-203ENST00000394961 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
SMARCAD1-203ENST00000394961 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
SMARCAD1-203ENST00000394961 SHROOM4Q9ULL8 1493 aa13.64□□□□□ -0.23
SMARCAD1-203ENST00000394961 BICRAQ9NZM4 1560 aa13.55□□□□□ -0.24
SMARCAD1-203ENST00000394961 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
SMARCAD1-203ENST00000394961 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
SMARCAD1-203ENST00000394961 EIF4G1Q04637 1599 aaKnown RBP13.14□□□□□ -0.31
SMARCAD1-203ENST00000394961 CC2D2AQ9P2K1 1620 aa13.14□□□□□ -0.31
SMARCAD1-203ENST00000394961 SCRIBQ14160 1630 aa13.13□□□□□ -0.31
SMARCAD1-203ENST00000394961 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMARCAD1-203ENST00000394961 CECR2Q9BXF3 1484 aa12.98□□□□□ -0.33
SMARCAD1-203ENST00000394961 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
SMARCAD1-203ENST00000394961 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
SMARCAD1-203ENST00000394961 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
SMARCAD1-203ENST00000394961 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
SMARCAD1-203ENST00000394961 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
SMARCAD1-203ENST00000394961 SMARCA2P51531 1590 aa12.71□□□□□ -0.37
SMARCAD1-203ENST00000394961 CUX2O14529 1486 aa12.66□□□□□ -0.38
SMARCAD1-203ENST00000394961 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
SMARCAD1-203ENST00000394961 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
SMARCAD1-203ENST00000394961 LAMC3Q9Y6N6 1575 aa12.55□□□□□ -0.4
SMARCAD1-203ENST00000394961 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
SMARCAD1-203ENST00000394961 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.42
SMARCAD1-203ENST00000394961 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
SMARCAD1-203ENST00000394961 PRDM2Q13029 1718 aa12.4□□□□□ -0.42
SMARCAD1-203ENST00000394961 KIF21AQ7Z4S6 1674 aa12.39□□□□□ -0.43
SMARCAD1-203ENST00000394961 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
SMARCAD1-203ENST00000394961 ERCC6Q03468 1493 aa12.36□□□□□ -0.43
SMARCAD1-203ENST00000394961 WDR62O43379 1518 aa12.32□□□□□ -0.44
SMARCAD1-203ENST00000394961 NESP48681 1621 aa12.3□□□□□ -0.44
SMARCAD1-203ENST00000394961 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
SMARCAD1-203ENST00000394961 WIZO95785 1651 aa12.28□□□□□ -0.44
SMARCAD1-203ENST00000394961 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
SMARCAD1-203ENST00000394961 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
SMARCAD1-203ENST00000394961 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
SMARCAD1-203ENST00000394961 CFTRP13569 1480 aa12.19□□□□□ -0.46
SMARCAD1-203ENST00000394961 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
SMARCAD1-203ENST00000394961 RSF1Q96T23 1441 aaPredicted RBP12.13□□□□□ -0.47
SMARCAD1-203ENST00000394961 FANCD2Q9BXW9 1451 aa12.09□□□□□ -0.47
SMARCAD1-203ENST00000394961 WDR97A6NE52 1622 aa12.06□□□□□ -0.48
SMARCAD1-203ENST00000394961 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
SMARCAD1-203ENST00000394961 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
SMARCAD1-203ENST00000394961 DNMBPQ6XZF7 1577 aa11.97□□□□□ -0.49
SMARCAD1-203ENST00000394961 IFT140Q96RY7 1462 aa11.96□□□□□ -0.49
SMARCAD1-203ENST00000394961 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
SMARCAD1-203ENST00000394961 TARBP1Q13395 1621 aaKnown RBP11.94□□□□□ -0.5
SMARCAD1-203ENST00000394961 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
SMARCAD1-203ENST00000394961 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
SMARCAD1-203ENST00000394961 CHD1O14646 1710 aa11.83□□□□□ -0.52
SMARCAD1-203ENST00000394961 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
SMARCAD1-203ENST00000394961 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
SMARCAD1-203ENST00000394961 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
SMARCAD1-203ENST00000394961 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
SMARCAD1-203ENST00000394961 CLASP1Q7Z460 1538 aa11.75□□□□□ -0.53
SMARCAD1-203ENST00000394961 POLA1P09884 1462 aaPredicted RBP11.75□□□□□ -0.53
SMARCAD1-203ENST00000394961 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
SMARCAD1-203ENST00000394961 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
SMARCAD1-203ENST00000394961 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
SMARCAD1-203ENST00000394961 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
SMARCAD1-203ENST00000394961 ARHGEF11O15085 1522 aa11.72□□□□□ -0.53
SMARCAD1-203ENST00000394961 MAGI1Q96QZ7 1491 aaPredicted RBP11.72□□□□□ -0.53
SMARCAD1-203ENST00000394961 CUX1P39880 1505 aa11.7□□□□□ -0.54
SMARCAD1-203ENST00000394961 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
SMARCAD1-203ENST00000394961 FGD5Q6ZNL6 1462 aa11.65□□□□□ -0.54
SMARCAD1-203ENST00000394961 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
SMARCAD1-203ENST00000394961 GRIN2BQ13224 1484 aa11.63□□□□□ -0.55
SMARCAD1-203ENST00000394961 TOP2BQ02880 1626 aa11.63□□□□□ -0.55
SMARCAD1-203ENST00000394961 SHROOM2Q13796 1616 aa11.62□□□□□ -0.55
SMARCAD1-203ENST00000394961 SYNJ2O15056 1496 aa11.61□□□□□ -0.55
SMARCAD1-203ENST00000394961 SOGA1O94964 1423 aa11.61□□□□□ -0.55
SMARCAD1-203ENST00000394961 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
SMARCAD1-203ENST00000394961 SNAPC4Q5SXM2 1469 aa11.58□□□□□ -0.55
SMARCAD1-203ENST00000394961 ADAMTS12P58397 1594 aa11.58□□□□□ -0.56
SMARCAD1-203ENST00000394961 AQRO60306 1485 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■■■■■ 62.5
SMARCAD1-203ENST00000394961 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
SMARCAD1-203ENST00000394961 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
SMARCAD1-203ENST00000394961 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
SMARCAD1-203ENST00000394961 NUP160Q12769 1436 aa11.51□□□□□ -0.57
SMARCAD1-203ENST00000394961 GRIN2AQ12879 1464 aa11.48□□□□□ -0.57
SMARCAD1-203ENST00000394961 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
SMARCAD1-203ENST00000394961 TRIM41Q8WV44 630 aa11.46□□□□□ -0.57
SMARCAD1-203ENST00000394961 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
SMARCAD1-203ENST00000394961 CUL7Q14999 1698 aa11.45□□□□□ -0.58
SMARCAD1-203ENST00000394961 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
SMARCAD1-203ENST00000394961 FHAD1B1AJZ9 1412 aa11.44□□□□□ -0.58
SMARCAD1-203ENST00000394961 RUSC2Q8N2Y8 1516 aa11.43□□□□□ -0.58
SMARCAD1-203ENST00000394961 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
SMARCAD1-203ENST00000394961 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
SMARCAD1-203ENST00000394961 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.6
SMARCAD1-203ENST00000394961 ERCC6L2Q5T890 1561 aa11.32□□□□□ -0.6
SMARCAD1-203ENST00000394961 KIAA0586Q9BVV6 1533 aa11.27□□□□□ -0.61
SMARCAD1-203ENST00000394961 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
SMARCAD1-203ENST00000394961 ADCY10Q96PN6 1610 aa11.25□□□□□ -0.61
SMARCAD1-203ENST00000394961 DIP2BQ9P265 1576 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms