RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
CCDC57-203ENST00000392343 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
CCDC57-203ENST00000392343 SETD5Q9C0A6 1442 aa19.88■□□□□ 0.77
CCDC57-203ENST00000392343 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
CCDC57-203ENST00000392343 PPP1R15AO75807 674 aaPredicted RBP19.83■□□□□ 0.77
CCDC57-203ENST00000392343 NEFLP07196 543 aa19.8■□□□□ 0.76
CCDC57-203ENST00000392343 IGF1RP08069 1367 aa19.8■□□□□ 0.76
CCDC57-203ENST00000392343 TIAM1Q13009 1591 aa19.79■□□□□ 0.76
CCDC57-203ENST00000392343 ANP32CO43423 234 aa19.77■□□□□ 0.75
CCDC57-203ENST00000392343 LRRC9Q6ZRR7 1453 aa19.77■□□□□ 0.75
CCDC57-203ENST00000392343 RBM19Q9Y4C8 960 aaKnown RBP19.76■□□□□ 0.75
CCDC57-203ENST00000392343 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
CCDC57-203ENST00000392343 CFTRP13569 1480 aa19.71■□□□□ 0.75
CCDC57-203ENST00000392343 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
CCDC57-203ENST00000392343 IRX6P78412 446 aaPredicted RBP19.68■□□□□ 0.74
CCDC57-203ENST00000392343 CCER2I3L3R5 266 aa19.65■□□□□ 0.74
CCDC57-203ENST00000392343 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
CCDC57-203ENST00000392343 FHOD3Q2V2M9 1422 aa19.63■□□□□ 0.73
CCDC57-203ENST00000392343 TONSLQ96HA7 1378 aa19.62■□□□□ 0.73
CCDC57-203ENST00000392343 MAP3K1Q13233 1512 aa19.62■□□□□ 0.73
CCDC57-203ENST00000392343 BCL11AQ9H165 835 aa19.62■□□□□ 0.73
CCDC57-203ENST00000392343 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
CCDC57-203ENST00000392343 TIMELESSQ9UNS1 1208 aa19.6■□□□□ 0.73
CCDC57-203ENST00000392343 HNRNPUQ00839 825 aaKnown RBP eCLIP19.59■□□□□ 0.73
CCDC57-203ENST00000392343 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
CCDC57-203ENST00000392343 FGD5Q6ZNL6 1462 aa19.59■□□□□ 0.73
CCDC57-203ENST00000392343 MSH5O43196 834 aa19.56■□□□□ 0.72
CCDC57-203ENST00000392343 CFAP43Q8NDM7 1665 aa19.51■□□□□ 0.71
CCDC57-203ENST00000392343 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
CCDC57-203ENST00000392343 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
CCDC57-203ENST00000392343 CADPSQ9ULU8 1353 aa19.48■□□□□ 0.71
CCDC57-203ENST00000392343 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
CCDC57-203ENST00000392343 FGD6Q6ZV73 1430 aa19.45■□□□□ 0.7
CCDC57-203ENST00000392343 CHIC2Q9UKJ5 165 aa19.45■□□□□ 0.7
CCDC57-203ENST00000392343 MTUS2Q5JR59 1369 aa19.45■□□□□ 0.7
CCDC57-203ENST00000392343 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
CCDC57-203ENST00000392343 RRP7BPQ9NSQ0 103 aa19.44■□□□□ 0.7
CCDC57-203ENST00000392343 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
CCDC57-203ENST00000392343 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■■□□ 18.3
CCDC57-203ENST00000392343 HSPA5P11021 654 aaKnown RBP19.42■□□□□ 0.7
CCDC57-203ENST00000392343 CASKIN1Q8WXD9 1431 aa19.42■□□□□ 0.7
CCDC57-203ENST00000392343 FYCO1Q9BQS8 1478 aa19.41■□□□□ 0.7
CCDC57-203ENST00000392343 WASHC2AQ641Q2 1341 aa19.41■□□□□ 0.7
CCDC57-203ENST00000392343 UACAQ9BZF9 1416 aa19.4■□□□□ 0.7
CCDC57-203ENST00000392343 FAM9BQ8IZU0 186 aa19.38■□□□□ 0.69
CCDC57-203ENST00000392343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.37■□□□□ 0.699e-7■□□□□ 9.5
CCDC57-203ENST00000392343 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
CCDC57-203ENST00000392343 HFM1A2PYH4 1435 aa19.36■□□□□ 0.69
CCDC57-203ENST00000392343 ERICH6Q7L0X2 663 aa19.36■□□□□ 0.69
CCDC57-203ENST00000392343 NAIPQ13075 1403 aa19.36■□□□□ 0.69
CCDC57-203ENST00000392343 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
CCDC57-203ENST00000392343 FOXD1Q16676 465 aa19.35■□□□□ 0.69
CCDC57-203ENST00000392343 PTPN23Q9H3S7 1636 aa19.35■□□□□ 0.69
CCDC57-203ENST00000392343 B4GALNT3Q6L9W6 998 aa19.32■□□□□ 0.68
CCDC57-203ENST00000392343 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
CCDC57-203ENST00000392343 C11orf95C9JLR9 678 aaPredicted RBP19.32■□□□□ 0.68
CCDC57-203ENST00000392343 ARID3CA6NKF2 412 aa19.31■□□□□ 0.68
CCDC57-203ENST00000392343 FMN1Q68DA7 1419 aa19.3■□□□□ 0.68
CCDC57-203ENST00000392343 KDM5BQ9UGL1 1544 aa19.3■□□□□ 0.68
CCDC57-203ENST00000392343 EIF4G2P78344 907 aaKnown RBP eCLIP19.3■□□□□ 0.684e-7■■■□□ 19
CCDC57-203ENST00000392343 NCOA2Q15596 1464 aa19.29■□□□□ 0.68
CCDC57-203ENST00000392343 FANCIQ9NVI1 1328 aa19.29■□□□□ 0.68
CCDC57-203ENST00000392343 EFCAB5A4FU69 1503 aa19.28■□□□□ 0.68
CCDC57-203ENST00000392343 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
CCDC57-203ENST00000392343 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
CCDC57-203ENST00000392343 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.68
CCDC57-203ENST00000392343 MRS2Q9HD23 443 aa19.26■□□□□ 0.67
CCDC57-203ENST00000392343 MYOM3Q5VTT5 1437 aa19.26■□□□□ 0.67
CCDC57-203ENST00000392343 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
CCDC57-203ENST00000392343 PPP4R2Q9NY27 417 aa19.26■□□□□ 0.67
CCDC57-203ENST00000392343 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
CCDC57-203ENST00000392343 ABCA10Q8WWZ4 1543 aa19.23■□□□□ 0.67
CCDC57-203ENST00000392343 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
CCDC57-203ENST00000392343 LRRIQ1Q96JM4 1722 aa19.22■□□□□ 0.67
CCDC57-203ENST00000392343 CTTNBP2Q8WZ74 1663 aa19.21■□□□□ 0.67
CCDC57-203ENST00000392343 NESP48681 1621 aa19.21■□□□□ 0.67
CCDC57-203ENST00000392343 MPHOSPH9Q99550 1183 aa19.21■□□□□ 0.67
CCDC57-203ENST00000392343 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
CCDC57-203ENST00000392343 DENND4BO75064 1496 aaPredicted RBP19.2■□□□□ 0.66
CCDC57-203ENST00000392343 CNTLNQ9NXG0 1405 aa19.19■□□□□ 0.66
CCDC57-203ENST00000392343 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
CCDC57-203ENST00000392343 POLR3GLQ9BT43 218 aa19.18■□□□□ 0.66
CCDC57-203ENST00000392343 KDM6BO15054 1643 aa19.17■□□□□ 0.66
CCDC57-203ENST00000392343 NBPF8Q3BBV2 869 aa19.17■□□□□ 0.66
CCDC57-203ENST00000392343 DNMBPQ6XZF7 1577 aa19.17■□□□□ 0.66
CCDC57-203ENST00000392343 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
CCDC57-203ENST00000392343 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
CCDC57-203ENST00000392343 SUPT6HQ7KZ85 1726 aaKnown RBP19.14■□□□□ 0.65
CCDC57-203ENST00000392343 MAGI3Q5TCQ9 1506 aa19.14■□□□□ 0.65
CCDC57-203ENST00000392343 CUL7Q14999 1698 aa19.13■□□□□ 0.65
CCDC57-203ENST00000392343 ERICH6BQ5W0A0 696 aa19.11■□□□□ 0.65
CCDC57-203ENST00000392343 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
CCDC57-203ENST00000392343 NBR1Q14596 966 aa19.1■□□□□ 0.65
CCDC57-203ENST00000392343 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
CCDC57-203ENST00000392343 NCOA1Q15788 1441 aa19.09■□□□□ 0.65
CCDC57-203ENST00000392343 UGGT2Q9NYU1 1516 aa19.08■□□□□ 0.65
CCDC57-203ENST00000392343 EHBP1L1Q8N3D4 1523 aa19.08■□□□□ 0.64
CCDC57-203ENST00000392343 ZNF326Q5BKZ1 582 aaKnown RBP19.07■□□□□ 0.64
CCDC57-203ENST00000392343 SAMD9Q5K651 1589 aa19.07■□□□□ 0.64
CCDC57-203ENST00000392343 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms