RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
CCDC57-203ENST00000392343 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
CCDC57-203ENST00000392343 SUPT5HO00267 1087 aaKnown RBP24.05■■□□□ 1.44
CCDC57-203ENST00000392343 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
CCDC57-203ENST00000392343 HRCP23327 699 aa23.37■■□□□ 1.33
CCDC57-203ENST00000392343 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
CCDC57-203ENST00000392343 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.32
CCDC57-203ENST00000392343 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
CCDC57-203ENST00000392343 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
CCDC57-203ENST00000392343 PPARGC1BQ86YN6 1023 aaKnown RBP23.12■■□□□ 1.29
CCDC57-203ENST00000392343 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
CCDC57-203ENST00000392343 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
CCDC57-203ENST00000392343 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
CCDC57-203ENST00000392343 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
CCDC57-203ENST00000392343 EHMT2Q96KQ7 1210 aa22.31■■□□□ 1.16
CCDC57-203ENST00000392343 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
CCDC57-203ENST00000392343 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
CCDC57-203ENST00000392343 ZEB1P37275 1124 aaPredicted RBP22.06■■□□□ 1.12
CCDC57-203ENST00000392343 ABCC9O60706 1549 aa22.05■■□□□ 1.12
CCDC57-203ENST00000392343 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
CCDC57-203ENST00000392343 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
CCDC57-203ENST00000392343 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
CCDC57-203ENST00000392343 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
CCDC57-203ENST00000392343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.75■■□□□ 1.07
CCDC57-203ENST00000392343 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
CCDC57-203ENST00000392343 TTBK1Q5TCY1 1321 aaPredicted RBP21.65■■□□□ 1.06
CCDC57-203ENST00000392343 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
CCDC57-203ENST00000392343 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.05
CCDC57-203ENST00000392343 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
CCDC57-203ENST00000392343 NEUROD1Q13562 356 aa21.52■■□□□ 1.04
CCDC57-203ENST00000392343 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
CCDC57-203ENST00000392343 WIZO95785 1651 aa21.47■■□□□ 1.03
CCDC57-203ENST00000392343 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
CCDC57-203ENST00000392343 GTF3C3Q9Y5Q9 886 aa21.36■■□□□ 1.01
CCDC57-203ENST00000392343 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
CCDC57-203ENST00000392343 CENPBP07199 599 aaPredicted RBP21.24■□□□□ 0.99
CCDC57-203ENST00000392343 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
CCDC57-203ENST00000392343 NACADO15069 1562 aa21.2■□□□□ 0.98
CCDC57-203ENST00000392343 YTHDC1Q96MU7 727 aaKnown RBP21.17■□□□□ 0.98
CCDC57-203ENST00000392343 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
CCDC57-203ENST00000392343 CEP162Q5TB80 1403 aa21.16■□□□□ 0.98
CCDC57-203ENST00000392343 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
CCDC57-203ENST00000392343 SOGA1O94964 1423 aa21.14■□□□□ 0.97
CCDC57-203ENST00000392343 EIF4G1Q04637 1599 aaKnown RBP21.13■□□□□ 0.97
CCDC57-203ENST00000392343 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
CCDC57-203ENST00000392343 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
CCDC57-203ENST00000392343 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
CCDC57-203ENST00000392343 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
CCDC57-203ENST00000392343 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
CCDC57-203ENST00000392343 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
CCDC57-203ENST00000392343 MIER1Q8N108 512 aa20.95■□□□□ 0.94
CCDC57-203ENST00000392343 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
CCDC57-203ENST00000392343 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
CCDC57-203ENST00000392343 RANGAP1P46060 587 aaPredicted RBP20.9■□□□□ 0.94
CCDC57-203ENST00000392343 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
CCDC57-203ENST00000392343 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
CCDC57-203ENST00000392343 EEA1Q15075 1411 aa20.76■□□□□ 0.91
CCDC57-203ENST00000392343 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
CCDC57-203ENST00000392343 APLP2Q06481 763 aa20.69■□□□□ 0.9
CCDC57-203ENST00000392343 CLIP1P30622 1438 aa20.67■□□□□ 0.9
CCDC57-203ENST00000392343 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
CCDC57-203ENST00000392343 UNC13AQ9UPW8 1703 aa20.6■□□□□ 0.89
CCDC57-203ENST00000392343 MYT1Q01538 1121 aa20.6■□□□□ 0.89
CCDC57-203ENST00000392343 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
CCDC57-203ENST00000392343 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
CCDC57-203ENST00000392343 RAPGEF2Q9Y4G8 1499 aa20.54■□□□□ 0.88
CCDC57-203ENST00000392343 KIF21BO75037 1637 aa20.48■□□□□ 0.87
CCDC57-203ENST00000392343 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
CCDC57-203ENST00000392343 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
CCDC57-203ENST00000392343 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.85
CCDC57-203ENST00000392343 ITGAEP38570 1179 aa20.38■□□□□ 0.85
CCDC57-203ENST00000392343 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
CCDC57-203ENST00000392343 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.85
CCDC57-203ENST00000392343 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
CCDC57-203ENST00000392343 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.84
CCDC57-203ENST00000392343 CLSPNQ9HAW4 1339 aa20.25■□□□□ 0.83
CCDC57-203ENST00000392343 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
CCDC57-203ENST00000392343 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
CCDC57-203ENST00000392343 BCANQ96GW7 911 aa20.19■□□□□ 0.82
CCDC57-203ENST00000392343 TSHZ2Q9NRE2 1034 aa20.18■□□□□ 0.82
CCDC57-203ENST00000392343 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
CCDC57-203ENST00000392343 PRXQ9BXM0 1461 aa20.13■□□□□ 0.81
CCDC57-203ENST00000392343 CCNB3Q8WWL7 1395 aa20.1■□□□□ 0.81
CCDC57-203ENST00000392343 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
CCDC57-203ENST00000392343 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.8
CCDC57-203ENST00000392343 HIRIP3Q9BW71 556 aaPredicted RBP20.06■□□□□ 0.8
CCDC57-203ENST00000392343 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
CCDC57-203ENST00000392343 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
CCDC57-203ENST00000392343 RAB3GAP2Q9H2M9 1393 aa20.05■□□□□ 0.8
CCDC57-203ENST00000392343 FKBP8Q14318 412 aa20.02■□□□□ 0.8
CCDC57-203ENST00000392343 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
CCDC57-203ENST00000392343 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
CCDC57-203ENST00000392343 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
CCDC57-203ENST00000392343 CUX1P39880 1505 aa19.98■□□□□ 0.79
CCDC57-203ENST00000392343 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
CCDC57-203ENST00000392343 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
CCDC57-203ENST00000392343 CUX2O14529 1486 aa19.95■□□□□ 0.78
CCDC57-203ENST00000392343 MAPKBP1O60336 1514 aa19.95■□□□□ 0.78
CCDC57-203ENST00000392343 ANP32EQ9BTT0 268 aa19.95■□□□□ 0.78
CCDC57-203ENST00000392343 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms