RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 FHOD3Q2V2M9 1422 aa25.84■■□□□ 1.73
PDX1-201ENST00000381033 ABCA5Q8WWZ7 1642 aa25.83■■□□□ 1.73
PDX1-201ENST00000381033 CUL7Q14999 1698 aa25.81■■□□□ 1.72
PDX1-201ENST00000381033 TARBP1Q13395 1621 aaKnown RBP25.78■■□□□ 1.72
PDX1-201ENST00000381033 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.72
PDX1-201ENST00000381033 ITGAEP38570 1179 aa25.75■■□□□ 1.71
PDX1-201ENST00000381033 ERICH6Q7L0X2 663 aa25.72■■□□□ 1.71
PDX1-201ENST00000381033 TIAM1Q13009 1591 aa25.72■■□□□ 1.71
PDX1-201ENST00000381033 PCF11O94913 1555 aaKnown RBP25.71■■□□□ 1.71
PDX1-201ENST00000381033 CTTNBP2Q8WZ74 1663 aa25.71■■□□□ 1.71
PDX1-201ENST00000381033 MRC2Q9UBG0 1479 aa25.71■■□□□ 1.71
PDX1-201ENST00000381033 RRBP1Q9P2E9 1410 aaKnown RBP25.68■■□□□ 1.7
PDX1-201ENST00000381033 FHAD1B1AJZ9 1412 aa25.66■■□□□ 1.7
PDX1-201ENST00000381033 CCNB3Q8WWL7 1395 aa25.65■■□□□ 1.7
PDX1-201ENST00000381033 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.7
PDX1-201ENST00000381033 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.69
PDX1-201ENST00000381033 PHLDB1Q86UU1 1377 aa25.61■■□□□ 1.69
PDX1-201ENST00000381033 EFCAB5A4FU69 1503 aa25.59■■□□□ 1.69
PDX1-201ENST00000381033 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
PDX1-201ENST00000381033 MAP3K1Q13233 1512 aa25.57■■□□□ 1.68
PDX1-201ENST00000381033 CASKIN1Q8WXD9 1431 aa25.54■■□□□ 1.68
PDX1-201ENST00000381033 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
PDX1-201ENST00000381033 FAM50AQ14320 339 aaKnown RBP25.52■■□□□ 1.68
PDX1-201ENST00000381033 FYCO1Q9BQS8 1478 aa25.51■■□□□ 1.67
PDX1-201ENST00000381033 WDR62O43379 1518 aa25.51■■□□□ 1.67
PDX1-201ENST00000381033 CFAP43Q8NDM7 1665 aa25.51■■□□□ 1.67
PDX1-201ENST00000381033 DHX57Q6P158 1386 aaKnown RBP25.5■■□□□ 1.67
PDX1-201ENST00000381033 SNAPC4Q5SXM2 1469 aa25.5■■□□□ 1.67
PDX1-201ENST00000381033 SAMD9Q5K651 1589 aa25.49■■□□□ 1.67
PDX1-201ENST00000381033 FMN1Q68DA7 1419 aa25.48■■□□□ 1.67
PDX1-201ENST00000381033 GRIN2BQ13224 1484 aa25.47■■□□□ 1.67
PDX1-201ENST00000381033 ADAMTS12P58397 1594 aa25.46■■□□□ 1.67
PDX1-201ENST00000381033 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
PDX1-201ENST00000381033 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
PDX1-201ENST00000381033 ARID3CA6NKF2 412 aa25.42■■□□□ 1.66
PDX1-201ENST00000381033 DIEXFQ68CQ4 756 aaKnown RBP25.4■■□□□ 1.66
PDX1-201ENST00000381033 BCL11AQ9H165 835 aa25.37■■□□□ 1.65
PDX1-201ENST00000381033 RAB3GAP2Q9H2M9 1393 aa25.37■■□□□ 1.65
PDX1-201ENST00000381033 MTUS2Q5JR59 1369 aa25.36■■□□□ 1.65
PDX1-201ENST00000381033 IQGAP2Q13576 1575 aa25.36■■□□□ 1.65
PDX1-201ENST00000381033 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
PDX1-201ENST00000381033 ZNF316A6NFI3 1004 aaPredicted RBP25.35■■□□□ 1.65
PDX1-201ENST00000381033 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
PDX1-201ENST00000381033 FBLN2P98095 1184 aa25.32■■□□□ 1.64
PDX1-201ENST00000381033 MAGI3Q5TCQ9 1506 aa25.26■■□□□ 1.63
PDX1-201ENST00000381033 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
PDX1-201ENST00000381033 GRIN2AQ12879 1464 aa25.23■■□□□ 1.63
PDX1-201ENST00000381033 FGD6Q6ZV73 1430 aa25.23■■□□□ 1.63
PDX1-201ENST00000381033 CHMP7Q8WUX9 453 aaPredicted RBP25.23■■□□□ 1.63
PDX1-201ENST00000381033 NCOA2Q15596 1464 aa25.22■■□□□ 1.63
PDX1-201ENST00000381033 CLSPNQ9HAW4 1339 aa25.22■■□□□ 1.63
PDX1-201ENST00000381033 CDK13Q14004 1512 aaKnown RBP25.2■■□□□ 1.62
PDX1-201ENST00000381033 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
PDX1-201ENST00000381033 SCAF1Q9H7N4 1312 aaKnown RBP25.17■■□□□ 1.62
PDX1-201ENST00000381033 DISP1Q96F81 1524 aa25.17■■□□□ 1.62
PDX1-201ENST00000381033 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
PDX1-201ENST00000381033 PTPRKQ15262 1439 aa25.17■■□□□ 1.62
PDX1-201ENST00000381033 EPRSP07814 1512 aaKnown RBP25.15■■□□□ 1.62
PDX1-201ENST00000381033 MAPKBP1O60336 1514 aa25.15■■□□□ 1.62
PDX1-201ENST00000381033 SIN3AQ96ST3 1273 aa25.12■■□□□ 1.61
PDX1-201ENST00000381033 MYOM3Q5VTT5 1437 aa25.12■■□□□ 1.61
PDX1-201ENST00000381033 CEP170Q5SW79 1584 aa25.11■■□□□ 1.61
PDX1-201ENST00000381033 SUPT6HQ7KZ85 1726 aaKnown RBP25.1■■□□□ 1.61
PDX1-201ENST00000381033 HECW1Q76N89 1606 aa25.1■■□□□ 1.61
PDX1-201ENST00000381033 EHBP1L1Q8N3D4 1523 aa25.1■■□□□ 1.61
PDX1-201ENST00000381033 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
PDX1-201ENST00000381033 KIAA0556O60303 1618 aa25.1■■□□□ 1.61
PDX1-201ENST00000381033 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
PDX1-201ENST00000381033 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.08■■□□□ 1.61
PDX1-201ENST00000381033 CCDC18Q5T9S5 1454 aa25.08■■□□□ 1.61
PDX1-201ENST00000381033 NEUROD1Q13562 356 aa25.07■■□□□ 1.6
PDX1-201ENST00000381033 CHIC2Q9UKJ5 165 aa25.05■■□□□ 1.6
PDX1-201ENST00000381033 ARHGEF11O15085 1522 aa25.03■■□□□ 1.6
PDX1-201ENST00000381033 JPH4Q96JJ6 628 aa25.02■■□□□ 1.6
PDX1-201ENST00000381033 NUP153P49790 1475 aaKnown RBP25.01■■□□□ 1.59
PDX1-201ENST00000381033 MIER1Q8N108 512 aa25■■□□□ 1.59
PDX1-201ENST00000381033 PTPN23Q9H3S7 1636 aa25■■□□□ 1.59
PDX1-201ENST00000381033 RRP7BPQ9NSQ0 103 aa24.99■■□□□ 1.59
PDX1-201ENST00000381033 PLB1Q6P1J6 1458 aa24.98■■□□□ 1.59
PDX1-201ENST00000381033 NUP160Q12769 1436 aa24.94■■□□□ 1.58
PDX1-201ENST00000381033 NAIPQ13075 1403 aa24.93■■□□□ 1.58
PDX1-201ENST00000381033 RAPGEF6Q8TEU7 1601 aa24.93■■□□□ 1.58
PDX1-201ENST00000381033 ZNF644Q9H582 1327 aaPredicted RBP24.93■■□□□ 1.58
PDX1-201ENST00000381033 HFM1A2PYH4 1435 aa24.93■■□□□ 1.58
PDX1-201ENST00000381033 PRG4Q92954 1404 aaPredicted RBP24.89■■□□□ 1.57
PDX1-201ENST00000381033 YTHDC1Q96MU7 727 aaKnown RBP24.85■■□□□ 1.57
PDX1-201ENST00000381033 TCOF1Q13428 1488 aaKnown RBP24.85■■□□□ 1.57
PDX1-201ENST00000381033 CARMIL2Q6F5E8 1435 aa24.83■■□□□ 1.56
PDX1-201ENST00000381033 KDM6BO15054 1643 aa24.81■■□□□ 1.56
PDX1-201ENST00000381033 CDK11AQ9UQ88 783 aaPredicted RBP24.8■■□□□ 1.56
PDX1-201ENST00000381033 UACAQ9BZF9 1416 aa24.8■■□□□ 1.56
PDX1-201ENST00000381033 MIA2Q96PC5 1412 aa24.79■■□□□ 1.56
PDX1-201ENST00000381033 DAXXQ9UER7 740 aaPredicted RBP24.78■■□□□ 1.56
PDX1-201ENST00000381033 HIRIP3Q9BW71 556 aaPredicted RBP24.77■■□□□ 1.56
PDX1-201ENST00000381033 TRIM52Q96A61 297 aa24.76■■□□□ 1.55
PDX1-201ENST00000381033 ZNF777Q9ULD5 760 aaPredicted RBP24.76■■□□□ 1.55
PDX1-201ENST00000381033 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
PDX1-201ENST00000381033 TROQ12816 1431 aaPredicted RBP24.74■■□□□ 1.55
PDX1-201ENST00000381033 KIF14Q15058 1648 aa24.74■■□□□ 1.55
PDX1-201ENST00000381033 PPP1R15AO75807 674 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms