RNA–Protein interactions for RNA: ENST00000380956.8

IRF4-201, Transcript of interferon regulatory factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF4, Length 5,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF4-201ENST00000380956 PKNOX2Q96KN3 472 aa19.36■□□□□ 0.69
IRF4-201ENST00000380956 CDK11BP21127 795 aaKnown RBP19.35■□□□□ 0.69
IRF4-201ENST00000380956 BECN1Q14457 450 aa19.33■□□□□ 0.69
IRF4-201ENST00000380956 TMC1Q8TDI8 760 aa19.32■□□□□ 0.68
IRF4-201ENST00000380956 RSPH6AQ9H0K4 717 aa19.3■□□□□ 0.68
IRF4-201ENST00000380956 PNNQ9H307 717 aaKnown RBP19.29■□□□□ 0.68
IRF4-201ENST00000380956 HSP90AA2PQ14568 343 aaPredicted RBP19.29■□□□□ 0.68
IRF4-201ENST00000380956 IPO9Q96P70 1041 aaKnown RBP19.27■□□□□ 0.68
IRF4-201ENST00000380956 ARID3AQ99856 593 aa19.25■□□□□ 0.67
IRF4-201ENST00000380956 FANCIQ9NVI1 1328 aa19.25■□□□□ 0.67
IRF4-201ENST00000380956 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
IRF4-201ENST00000380956 DNTTIP2Q5QJE6 756 aaKnown RBP19.21■□□□□ 0.67
IRF4-201ENST00000380956 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.21■□□□□ 0.66
IRF4-201ENST00000380956 PODXL2Q9NZ53 605 aa19.19■□□□□ 0.66
IRF4-201ENST00000380956 IL27Q8NEV9 243 aa19.18■□□□□ 0.66
IRF4-201ENST00000380956 A0A0U1RQG5 324 aaPredicted RBP19.17■□□□□ 0.66
IRF4-201ENST00000380956 NCLP19338 710 aaKnown RBP19.14■□□□□ 0.66
IRF4-201ENST00000380956 PTMAP06454 111 aaKnown RBP19.13■□□□□ 0.65
IRF4-201ENST00000380956 KCNH8Q96L42 1107 aa19.13■□□□□ 0.65
IRF4-201ENST00000380956 RGS3P49796 1198 aa19.11■□□□□ 0.65
IRF4-201ENST00000380956 CCER2I3L3R5 266 aa19.09■□□□□ 0.65
IRF4-201ENST00000380956 GOLGA6L22H0YM25 854 aa19.08■□□□□ 0.64
IRF4-201ENST00000380956 GSE1Q14687 1217 aa19.07■□□□□ 0.64
IRF4-201ENST00000380956 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
IRF4-201ENST00000380956 MSNP26038 577 aaKnown RBP19.06■□□□□ 0.64
IRF4-201ENST00000380956 GZF1Q9H116 711 aaPredicted RBP19.04■□□□□ 0.64
IRF4-201ENST00000380956 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
IRF4-201ENST00000380956 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
IRF4-201ENST00000380956 P3H3Q8IVL6 736 aa19.03■□□□□ 0.64
IRF4-201ENST00000380956 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
IRF4-201ENST00000380956 SPRYD3Q8NCJ5 442 aa18.99■□□□□ 0.63
IRF4-201ENST00000380956 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
IRF4-201ENST00000380956 SLKQ9H2G2 1235 aaPredicted RBP18.95■□□□□ 0.62
IRF4-201ENST00000380956 UBE2Q2Q8WVN8 375 aa18.95■□□□□ 0.62
IRF4-201ENST00000380956 BRPF3Q9ULD4 1205 aa18.95■□□□□ 0.62
IRF4-201ENST00000380956 GOLGA6L3A6NEY3 463 aa18.94■□□□□ 0.62
IRF4-201ENST00000380956 TCERG1O14776 1098 aaKnown RBP18.93■□□□□ 0.62
IRF4-201ENST00000380956 WDR43Q15061 677 aaKnown RBP eCLIP18.92■□□□□ 0.62
IRF4-201ENST00000380956 SLC4A3P48751 1232 aa18.89■□□□□ 0.62
IRF4-201ENST00000380956 CLIP1P30622 1438 aa18.89■□□□□ 0.61
IRF4-201ENST00000380956 TPRNQ4KMQ1 711 aa18.87■□□□□ 0.61
IRF4-201ENST00000380956 MSH5O43196 834 aa18.87■□□□□ 0.61
IRF4-201ENST00000380956 PLCB2Q00722 1185 aa18.85■□□□□ 0.61
IRF4-201ENST00000380956 PAK3O75914 559 aaPredicted RBP18.83■□□□□ 0.61
IRF4-201ENST00000380956 CHIC2Q9UKJ5 165 aa18.82■□□□□ 0.6
IRF4-201ENST00000380956 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
IRF4-201ENST00000380956 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
IRF4-201ENST00000380956 PDE4AP27815 886 aa18.77■□□□□ 0.6
IRF4-201ENST00000380956 CHAF1AQ13111 956 aaPredicted RBP18.77■□□□□ 0.6
IRF4-201ENST00000380956 ARID3CA6NKF2 412 aa18.77■□□□□ 0.59
IRF4-201ENST00000380956 TNNT3P45378 269 aaPredicted RBP18.76■□□□□ 0.59
IRF4-201ENST00000380956 HSCBQ8IWL3 235 aa18.75■□□□□ 0.59
IRF4-201ENST00000380956 FRAT1Q92837 279 aaPredicted RBP18.75■□□□□ 0.59
IRF4-201ENST00000380956 FAM13BQ9NYF5 915 aa18.73■□□□□ 0.59
IRF4-201ENST00000380956 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
IRF4-201ENST00000380956 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
IRF4-201ENST00000380956 NFKBIBQ15653 356 aa18.7■□□□□ 0.58
IRF4-201ENST00000380956 SLC24A1O60721 1099 aa18.69■□□□□ 0.58
IRF4-201ENST00000380956 NUDCQ9Y266 331 aa18.67■□□□□ 0.58
IRF4-201ENST00000380956 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
IRF4-201ENST00000380956 FAM43AQ8N2R8 423 aa18.66■□□□□ 0.58
IRF4-201ENST00000380956 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
IRF4-201ENST00000380956 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.58
IRF4-201ENST00000380956 GBP4Q96PP9 640 aa18.64■□□□□ 0.57
IRF4-201ENST00000380956 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
IRF4-201ENST00000380956 KIAA2012Q0VF49 1180 aa18.62■□□□□ 0.57
IRF4-201ENST00000380956 ZMYND15Q9H091 742 aa18.62■□□□□ 0.57
IRF4-201ENST00000380956 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
IRF4-201ENST00000380956 RRP7BPQ9NSQ0 103 aa18.62■□□□□ 0.57
IRF4-201ENST00000380956 EEA1Q15075 1411 aa18.61■□□□□ 0.57
IRF4-201ENST00000380956 HSPA5P11021 654 aaKnown RBP18.6■□□□□ 0.57
IRF4-201ENST00000380956 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
IRF4-201ENST00000380956 ZNF771Q7L3S4 317 aaPredicted RBP18.55■□□□□ 0.56
IRF4-201ENST00000380956 RRP9O43818 475 aaKnown RBP18.55■□□□□ 0.56
IRF4-201ENST00000380956 EXOC6Q8TAG9 804 aa18.53■□□□□ 0.56
IRF4-201ENST00000380956 PTMSP20962 102 aa18.51■□□□□ 0.55
IRF4-201ENST00000380956 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
IRF4-201ENST00000380956 RBM10P98175 930 aaKnown RBP18.5■□□□□ 0.55
IRF4-201ENST00000380956 CCNB3Q8WWL7 1395 aa18.5■□□□□ 0.55
IRF4-201ENST00000380956 FRAT2O75474 233 aaPredicted RBP18.49■□□□□ 0.55
IRF4-201ENST00000380956 FAM161AQ3B820 660 aa18.49■□□□□ 0.55
IRF4-201ENST00000380956 DRC7Q8IY82 874 aa18.49■□□□□ 0.55
IRF4-201ENST00000380956 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
IRF4-201ENST00000380956 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
IRF4-201ENST00000380956 MFAP1P55081 439 aaKnown RBP18.47■□□□□ 0.55
IRF4-201ENST00000380956 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
IRF4-201ENST00000380956 DDX11L8A8MPP1 907 aa18.46■□□□□ 0.55
IRF4-201ENST00000380956 MS4A1P11836 297 aa18.46■□□□□ 0.55
IRF4-201ENST00000380956 TPM2P07951 284 aa18.46■□□□□ 0.55
IRF4-201ENST00000380956 R3HCC1Q9Y3T6 440 aaKnown RBP18.45■□□□□ 0.54
IRF4-201ENST00000380956 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
IRF4-201ENST00000380956 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
IRF4-201ENST00000380956 DHX57Q6P158 1386 aaKnown RBP18.45■□□□□ 0.54
IRF4-201ENST00000380956 CARD11Q9BXL7 1154 aa18.44■□□□□ 0.54
IRF4-201ENST00000380956 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
IRF4-201ENST00000380956 ZBED9Q6R2W3 1325 aa18.44■□□□□ 0.54
IRF4-201ENST00000380956 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
IRF4-201ENST00000380956 ZRSR1Q15695 479 aaKnown RBP18.42■□□□□ 0.54
IRF4-201ENST00000380956 MAP7D2Q96T17 732 aa18.42■□□□□ 0.54
IRF4-201ENST00000380956 PLIN1O60240 522 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms