RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 JPH4Q96JJ6 628 aa30.03■■■□□ 2.4
HMGN1-204ENST00000380749 IGF1RP08069 1367 aa30.01■■■□□ 2.39
HMGN1-204ENST00000380749 KIAA0586Q9BVV6 1533 aa29.96■■■□□ 2.39
HMGN1-204ENST00000380749 KIF13AQ9H1H9 1805 aa29.94■■■□□ 2.38
HMGN1-204ENST00000380749 CARMIL1Q5VZK9 1371 aa29.84■■■□□ 2.37
HMGN1-204ENST00000380749 ADCY10Q96PN6 1610 aa29.84■■■□□ 2.37
HMGN1-204ENST00000380749 IQGAP2Q13576 1575 aa29.78■■■□□ 2.36
HMGN1-204ENST00000380749 MAPKBP1O60336 1514 aa29.78■■■□□ 2.36
HMGN1-204ENST00000380749 NPM1P06748 294 aaKnown RBP eCLIP29.72■■■□□ 2.35
HMGN1-204ENST00000380749 CARMIL2Q6F5E8 1435 aa29.69■■■□□ 2.34
HMGN1-204ENST00000380749 DIP2BQ9P265 1576 aa29.69■■■□□ 2.34
HMGN1-204ENST00000380749 ABCC10Q5T3U5 1492 aa29.68■■■□□ 2.34
HMGN1-204ENST00000380749 RAPGEF2Q9Y4G8 1499 aa29.65■■■□□ 2.34
HMGN1-204ENST00000380749 PTPRGP23470 1445 aa29.63■■■□□ 2.33
HMGN1-204ENST00000380749 TNIKQ9UKE5 1360 aa29.6■■■□□ 2.33
HMGN1-204ENST00000380749 CTTNBP2Q8WZ74 1663 aa29.6■■■□□ 2.33
HMGN1-204ENST00000380749 FAM69CQ0P6D2 419 aa29.57■■■□□ 2.32
HMGN1-204ENST00000380749 TSPOAP1O95153 1857 aa29.56■■■□□ 2.32
HMGN1-204ENST00000380749 UGGT2Q9NYU1 1516 aa29.55■■■□□ 2.32
HMGN1-204ENST00000380749 DISP1Q96F81 1524 aa29.54■■■□□ 2.32
HMGN1-204ENST00000380749 ABCC2Q92887 1545 aa29.52■■■□□ 2.32
HMGN1-204ENST00000380749 TTBK1Q5TCY1 1321 aaPredicted RBP29.52■■■□□ 2.32
HMGN1-204ENST00000380749 KIAA0556O60303 1618 aa29.51■■■□□ 2.31
HMGN1-204ENST00000380749 UHRF1BP1LA0JNW5 1464 aa29.47■■■□□ 2.31
HMGN1-204ENST00000380749 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
HMGN1-204ENST00000380749 UACAQ9BZF9 1416 aa29.44■■■□□ 2.3
HMGN1-204ENST00000380749 KDM6BO15054 1643 aa29.42■■■□□ 2.3
HMGN1-204ENST00000380749 PLB1Q6P1J6 1458 aa29.39■■■□□ 2.3
HMGN1-204ENST00000380749 ASXL2Q76L83 1435 aa29.38■■■□□ 2.29
HMGN1-204ENST00000380749 ZCCHC11Q5TAX3 1644 aaKnown RBP29.36■■■□□ 2.29
HMGN1-204ENST00000380749 GLI2P10070 1586 aa29.35■■■□□ 2.29
HMGN1-204ENST00000380749 PRXQ9BXM0 1461 aa29.34■■■□□ 2.29
HMGN1-204ENST00000380749 GOLGA3Q08378 1498 aa29.34■■■□□ 2.29
HMGN1-204ENST00000380749 KDM5BQ9UGL1 1544 aa29.33■■■□□ 2.29
HMGN1-204ENST00000380749 PPRC1Q5VV67 1664 aaKnown RBP29.31■■■□□ 2.28
HMGN1-204ENST00000380749 MAP3K4Q9Y6R4 1608 aa29.23■■■□□ 2.27
HMGN1-204ENST00000380749 EPRSP07814 1512 aaKnown RBP29.22■■■□□ 2.27
HMGN1-204ENST00000380749 ABCA8O94911 1581 aa29.19■■■□□ 2.26
HMGN1-204ENST00000380749 WDR7Q9Y4E6 1490 aa29.15■■■□□ 2.26
HMGN1-204ENST00000380749 TEX14Q8IWB6 1497 aa29.12■■■□□ 2.25
HMGN1-204ENST00000380749 EEA1Q15075 1411 aa29.1■■■□□ 2.25
HMGN1-204ENST00000380749 CFAP43Q8NDM7 1665 aa29.08■■■□□ 2.25
HMGN1-204ENST00000380749 SAMD9Q5K651 1589 aa29.07■■■□□ 2.24
HMGN1-204ENST00000380749 CSRNP3Q8WYN3 585 aa29.07■■■□□ 2.24
HMGN1-204ENST00000380749 FAM9AQ8IZU1 332 aaPredicted RBP29.01■■■□□ 2.24
HMGN1-204ENST00000380749 RAPGEF6Q8TEU7 1601 aa28.95■■■□□ 2.22
HMGN1-204ENST00000380749 KIF21BO75037 1637 aa28.93■■■□□ 2.22
HMGN1-204ENST00000380749 MAGI3Q5TCQ9 1506 aa28.93■■■□□ 2.22
HMGN1-204ENST00000380749 COL17A1Q9UMD9 1497 aaPredicted RBP28.92■■■□□ 2.22
HMGN1-204ENST00000380749 CD109Q6YHK3 1445 aa28.91■■■□□ 2.22
HMGN1-204ENST00000380749 P3H3Q8IVL6 736 aa28.91■■■□□ 2.22
HMGN1-204ENST00000380749 KCNH8Q96L42 1107 aa28.88■■■□□ 2.21
HMGN1-204ENST00000380749 KDM4FA0A1W2PPD8 638 aa28.87■■■□□ 2.21
HMGN1-204ENST00000380749 ATP10BO94823 1461 aa28.86■■■□□ 2.21
HMGN1-204ENST00000380749 ABCA9Q8IUA7 1624 aa28.83■■■□□ 2.21
HMGN1-204ENST00000380749 ARID3CA6NKF2 412 aa28.82■■■□□ 2.2
HMGN1-204ENST00000380749 EFCAB5A4FU69 1503 aa28.82■■■□□ 2.2
HMGN1-204ENST00000380749 ADGRL1O94910 1474 aa28.81■■■□□ 2.2
HMGN1-204ENST00000380749 FHOD3Q2V2M9 1422 aa28.78■■■□□ 2.2
HMGN1-204ENST00000380749 NUP153P49790 1475 aaKnown RBP28.75■■■□□ 2.19
HMGN1-204ENST00000380749 RANGAP1P46060 587 aaPredicted RBP28.75■■■□□ 2.19
HMGN1-204ENST00000380749 ARAP3Q8WWN8 1544 aa28.69■■■□□ 2.18
HMGN1-204ENST00000380749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.69■■■□□ 2.18
HMGN1-204ENST00000380749 HNRNPUL2Q1KMD3 747 aaKnown RBP28.69■■■□□ 2.18
HMGN1-204ENST00000380749 PHLDB1Q86UU1 1377 aa28.63■■■□□ 2.17
HMGN1-204ENST00000380749 NEO1Q92859 1461 aa28.62■■■□□ 2.17
HMGN1-204ENST00000380749 CHIC1Q5VXU3 224 aa28.59■■■□□ 2.17
HMGN1-204ENST00000380749 CFAP74Q9C0B2 1584 aa28.57■■■□□ 2.16
HMGN1-204ENST00000380749 UBTFP17480 764 aaKnown RBP28.54■■■□□ 2.16
HMGN1-204ENST00000380749 HECW1Q76N89 1606 aa28.53■■■□□ 2.16
HMGN1-204ENST00000380749 PLEKHD1A6NEE1 506 aa28.52■■■□□ 2.16
HMGN1-204ENST00000380749 FRMPD1Q5SYB0 1578 aa28.51■■■□□ 2.15
HMGN1-204ENST00000380749 TTC37Q6PGP7 1564 aa28.51■■■□□ 2.15
HMGN1-204ENST00000380749 CDK13Q14004 1512 aaKnown RBP28.5■■■□□ 2.15
HMGN1-204ENST00000380749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.5■■■□□ 2.151e-6■■■■□ 20.1
HMGN1-204ENST00000380749 FMN1Q68DA7 1419 aa28.49■■■□□ 2.15
HMGN1-204ENST00000380749 EHMT2Q96KQ7 1210 aa28.49■■■□□ 2.15
HMGN1-204ENST00000380749 RICTORQ6R327 1708 aa28.48■■■□□ 2.15
HMGN1-204ENST00000380749 ARHGAP35Q9NRY4 1499 aa28.46■■■□□ 2.15
HMGN1-204ENST00000380749 FANCAO15360 1455 aa28.43■■■□□ 2.14
HMGN1-204ENST00000380749 HECW2Q9P2P5 1572 aa28.42■■■□□ 2.14
HMGN1-204ENST00000380749 RAPGEF3O95398 923 aa28.41■■■□□ 2.14
HMGN1-204ENST00000380749 MYO5CQ9NQX4 1742 aa28.41■■■□□ 2.14
HMGN1-204ENST00000380749 ARHGEF40Q8TER5 1519 aa28.41■■■□□ 2.14
HMGN1-204ENST00000380749 DENND4BO75064 1496 aaPredicted RBP28.38■■■□□ 2.13
HMGN1-204ENST00000380749 ADAMTSL3P82987 1691 aa28.37■■■□□ 2.13
HMGN1-204ENST00000380749 AKNAQ7Z591 1439 aa28.37■■■□□ 2.13
HMGN1-204ENST00000380749 BCORL1Q5H9F3 1711 aa28.36■■■□□ 2.13
HMGN1-204ENST00000380749 LRRIQ1Q96JM4 1722 aa28.36■■■□□ 2.13
HMGN1-204ENST00000380749 KIF14Q15058 1648 aa28.34■■■□□ 2.13
HMGN1-204ENST00000380749 ZMYM4Q5VZL5 1548 aa28.34■■■□□ 2.13
HMGN1-204ENST00000380749 ATP1B4Q9UN42 357 aaPredicted RBP28.33■■■□□ 2.13
HMGN1-204ENST00000380749 CDK11AQ9UQ88 783 aaPredicted RBP28.28■■■□□ 2.12
HMGN1-204ENST00000380749 MADDQ8WXG6 1647 aa28.27■■■□□ 2.12
HMGN1-204ENST00000380749 PLCH2O75038 1416 aa28.27■■■□□ 2.12
HMGN1-204ENST00000380749 PCF11O94913 1555 aaKnown RBP28.26■■■□□ 2.11
HMGN1-204ENST00000380749 ZFYVE16Q7Z3T8 1539 aa28.26■■■□□ 2.11
HMGN1-204ENST00000380749 CLIP1P30622 1438 aa28.24■■■□□ 2.11
HMGN1-204ENST00000380749 TROQ12816 1431 aaPredicted RBP28.23■■■□□ 2.11
HMGN1-204ENST00000380749 ARID4BQ4LE39 1312 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms