RNA–Protein interactions for RNA: ENST00000380665.3

CDCA2-202, Transcript of cell division cycle associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCA2, Length 3,565 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-202ENST00000380665 RAB3GAP2Q9H2M9 1393 aa18.43■□□□□ 0.54
CDCA2-202ENST00000380665 FOXD1Q16676 465 aa18.41■□□□□ 0.54
CDCA2-202ENST00000380665 CADPSQ9ULU8 1353 aa18.4■□□□□ 0.54
CDCA2-202ENST00000380665 IGF1RP08069 1367 aa18.4■□□□□ 0.54
CDCA2-202ENST00000380665 ANP32CO43423 234 aa18.4■□□□□ 0.54
CDCA2-202ENST00000380665 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
CDCA2-202ENST00000380665 IRX6P78412 446 aaPredicted RBP18.39■□□□□ 0.53
CDCA2-202ENST00000380665 FKBP8Q14318 412 aa18.39■□□□□ 0.53
CDCA2-202ENST00000380665 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
CDCA2-202ENST00000380665 CUX1P39880 1505 aa18.36■□□□□ 0.53
CDCA2-202ENST00000380665 NESP48681 1621 aa18.33■□□□□ 0.53
CDCA2-202ENST00000380665 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
CDCA2-202ENST00000380665 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
CDCA2-202ENST00000380665 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
CDCA2-202ENST00000380665 PHLDB1Q86UU1 1377 aa18.27■□□□□ 0.52
CDCA2-202ENST00000380665 PRXQ9BXM0 1461 aa18.27■□□□□ 0.51
CDCA2-202ENST00000380665 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDCA2-202ENST00000380665 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
CDCA2-202ENST00000380665 MYT1LQ9UL68 1186 aa18.24■□□□□ 0.51
CDCA2-202ENST00000380665 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
CDCA2-202ENST00000380665 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
CDCA2-202ENST00000380665 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
CDCA2-202ENST00000380665 CFTRP13569 1480 aa18.21■□□□□ 0.51
CDCA2-202ENST00000380665 SUPT16HQ9Y5B9 1047 aaKnown RBP18.21■□□□□ 0.51
CDCA2-202ENST00000380665 KDM2AQ9Y2K7 1162 aa18.19■□□□□ 0.5
CDCA2-202ENST00000380665 SALL2Q9Y467 1007 aaPredicted RBP18.17■□□□□ 0.5
CDCA2-202ENST00000380665 CHMP7Q8WUX9 453 aaPredicted RBP18.17■□□□□ 0.5
CDCA2-202ENST00000380665 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
CDCA2-202ENST00000380665 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
CDCA2-202ENST00000380665 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
CDCA2-202ENST00000380665 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
CDCA2-202ENST00000380665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
CDCA2-202ENST00000380665 PPP1R15AO75807 674 aaPredicted RBP18.1■□□□□ 0.49
CDCA2-202ENST00000380665 ZNF644Q9H582 1327 aaPredicted RBP18.06■□□□□ 0.48
CDCA2-202ENST00000380665 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
CDCA2-202ENST00000380665 ERICH6Q7L0X2 663 aa18.04■□□□□ 0.48
CDCA2-202ENST00000380665 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
CDCA2-202ENST00000380665 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
CDCA2-202ENST00000380665 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
CDCA2-202ENST00000380665 HSPA5P11021 654 aaKnown RBP18.02■□□□□ 0.48
CDCA2-202ENST00000380665 RGL3Q3MIN7 710 aa18.02■□□□□ 0.48
CDCA2-202ENST00000380665 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.48
CDCA2-202ENST00000380665 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.48
CDCA2-202ENST00000380665 ERICH3Q5RHP9 1530 aa18.02■□□□□ 0.48
CDCA2-202ENST00000380665 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.479e-8■■■■■ 33.5
CDCA2-202ENST00000380665 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDCA2-202ENST00000380665 RRBP1Q9P2E9 1410 aaKnown RBP18.01■□□□□ 0.47
CDCA2-202ENST00000380665 POLA1P09884 1462 aaPredicted RBP17.98■□□□□ 0.47
CDCA2-202ENST00000380665 L3MBTL2Q969R5 705 aa17.98■□□□□ 0.47
CDCA2-202ENST00000380665 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
CDCA2-202ENST00000380665 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
CDCA2-202ENST00000380665 MPHOSPH9Q99550 1183 aa17.96■□□□□ 0.47
CDCA2-202ENST00000380665 FMN1Q68DA7 1419 aa17.93■□□□□ 0.46
CDCA2-202ENST00000380665 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
CDCA2-202ENST00000380665 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
CDCA2-202ENST00000380665 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
CDCA2-202ENST00000380665 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
CDCA2-202ENST00000380665 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
CDCA2-202ENST00000380665 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
CDCA2-202ENST00000380665 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
CDCA2-202ENST00000380665 CCDC18Q5T9S5 1454 aa17.87■□□□□ 0.45
CDCA2-202ENST00000380665 TIAM1Q13009 1591 aa17.87■□□□□ 0.45
CDCA2-202ENST00000380665 PLEKHD1A6NEE1 506 aa17.86■□□□□ 0.45
CDCA2-202ENST00000380665 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
CDCA2-202ENST00000380665 PKD2Q13563 968 aa17.85■□□□□ 0.45
CDCA2-202ENST00000380665 TSHZ2Q9NRE2 1034 aa17.85■□□□□ 0.45
CDCA2-202ENST00000380665 PCF11O94913 1555 aaKnown RBP17.84■□□□□ 0.45
CDCA2-202ENST00000380665 CCDC184Q52MB2 194 aa17.84■□□□□ 0.45
CDCA2-202ENST00000380665 HNRNPMP52272 730 aaKnown RBP eCLIP17.81■□□□□ 0.441e-6■■■■■ 43.8
CDCA2-202ENST00000380665 B4GALNT3Q6L9W6 998 aa17.81■□□□□ 0.44
CDCA2-202ENST00000380665 NCOA2Q15596 1464 aa17.8■□□□□ 0.44
CDCA2-202ENST00000380665 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
CDCA2-202ENST00000380665 DCAF11Q8TEB1 546 aa17.79■□□□□ 0.44
CDCA2-202ENST00000380665 CASKIN1Q8WXD9 1431 aa17.79■□□□□ 0.44
CDCA2-202ENST00000380665 CARD11Q9BXL7 1154 aa17.78■□□□□ 0.44
CDCA2-202ENST00000380665 PTPRKQ15262 1439 aa17.77■□□□□ 0.44
CDCA2-202ENST00000380665 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
CDCA2-202ENST00000380665 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
CDCA2-202ENST00000380665 WASHC2AQ641Q2 1341 aa17.74■□□□□ 0.43
CDCA2-202ENST00000380665 CHGAP10645 457 aaKnown RBP17.74■□□□□ 0.43
CDCA2-202ENST00000380665 MYOM3Q5VTT5 1437 aa17.74■□□□□ 0.43
CDCA2-202ENST00000380665 MAPKBP1O60336 1514 aa17.73■□□□□ 0.43
CDCA2-202ENST00000380665 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
CDCA2-202ENST00000380665 C11orf95C9JLR9 678 aaPredicted RBP17.73■□□□□ 0.43
CDCA2-202ENST00000380665 TIMELESSQ9UNS1 1208 aa17.73■□□□□ 0.43
CDCA2-202ENST00000380665 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
CDCA2-202ENST00000380665 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
CDCA2-202ENST00000380665 CCER2I3L3R5 266 aa17.69■□□□□ 0.42
CDCA2-202ENST00000380665 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
CDCA2-202ENST00000380665 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
CDCA2-202ENST00000380665 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
CDCA2-202ENST00000380665 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
CDCA2-202ENST00000380665 NUP155O75694 1391 aa17.68■□□□□ 0.42
CDCA2-202ENST00000380665 RBM19Q9Y4C8 960 aaKnown RBP17.66■□□□□ 0.42
CDCA2-202ENST00000380665 UACAQ9BZF9 1416 aa17.66■□□□□ 0.42
CDCA2-202ENST00000380665 NAIPQ13075 1403 aa17.66■□□□□ 0.42
CDCA2-202ENST00000380665 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
CDCA2-202ENST00000380665 PRG4Q92954 1404 aaPredicted RBP17.63■□□□□ 0.41
CDCA2-202ENST00000380665 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
CDCA2-202ENST00000380665 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms