RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 RIMBP3CA6NJZ7 1639 aa22.83■■□□□ 1.24
HERPUD1-203ENST00000379792 RIMBP3BA6NNM3 1639 aa22.83■■□□□ 1.24
HERPUD1-203ENST00000379792 RIMBP3Q9UFD9 1639 aa22.83■■□□□ 1.24
HERPUD1-203ENST00000379792 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
HERPUD1-203ENST00000379792 CLASP1Q7Z460 1538 aa22.81■■□□□ 1.24
HERPUD1-203ENST00000379792 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
HERPUD1-203ENST00000379792 RANGAP1P46060 587 aaPredicted RBP22.78■■□□□ 1.24
HERPUD1-203ENST00000379792 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
HERPUD1-203ENST00000379792 NUP160Q12769 1436 aa22.69■■□□□ 1.22
HERPUD1-203ENST00000379792 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
HERPUD1-203ENST00000379792 KIAA0586Q9BVV6 1533 aa22.65■■□□□ 1.22
HERPUD1-203ENST00000379792 CEP162Q5TB80 1403 aa22.64■■□□□ 1.22
HERPUD1-203ENST00000379792 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
HERPUD1-203ENST00000379792 CYB5RLQ6IPT4 315 aa22.6■■□□□ 1.21
HERPUD1-203ENST00000379792 IQGAP2Q13576 1575 aa22.6■■□□□ 1.21
HERPUD1-203ENST00000379792 CLIP1P30622 1438 aa22.59■■□□□ 1.21
HERPUD1-203ENST00000379792 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
HERPUD1-203ENST00000379792 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
HERPUD1-203ENST00000379792 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
HERPUD1-203ENST00000379792 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
HERPUD1-203ENST00000379792 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
HERPUD1-203ENST00000379792 PRG4Q92954 1404 aaPredicted RBP22.45■■□□□ 1.18
HERPUD1-203ENST00000379792 ERCC6L2Q5T890 1561 aa22.44■■□□□ 1.18
HERPUD1-203ENST00000379792 DISP1Q96F81 1524 aa22.43■■□□□ 1.18
HERPUD1-203ENST00000379792 FHOD3Q2V2M9 1422 aa22.43■■□□□ 1.18
HERPUD1-203ENST00000379792 TTBK1Q5TCY1 1321 aaPredicted RBP22.43■■□□□ 1.18
HERPUD1-203ENST00000379792 EFCAB5A4FU69 1503 aa22.42■■□□□ 1.18
HERPUD1-203ENST00000379792 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
HERPUD1-203ENST00000379792 CARMIL2Q6F5E8 1435 aa22.39■■□□□ 1.17
HERPUD1-203ENST00000379792 KIAA0556O60303 1618 aa22.37■■□□□ 1.17
HERPUD1-203ENST00000379792 VPS8Q8N3P4 1428 aa22.29■■□□□ 1.16
HERPUD1-203ENST00000379792 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
HERPUD1-203ENST00000379792 PTPRGP23470 1445 aa22.26■■□□□ 1.15
HERPUD1-203ENST00000379792 FMN1Q68DA7 1419 aa22.24■■□□□ 1.15
HERPUD1-203ENST00000379792 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
HERPUD1-203ENST00000379792 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
HERPUD1-203ENST00000379792 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
HERPUD1-203ENST00000379792 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
HERPUD1-203ENST00000379792 CASKIN1Q8WXD9 1431 aa22.16■■□□□ 1.14
HERPUD1-203ENST00000379792 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
HERPUD1-203ENST00000379792 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
HERPUD1-203ENST00000379792 APLP2Q06481 763 aa22.1■■□□□ 1.13
HERPUD1-203ENST00000379792 RAPGEF6Q8TEU7 1601 aa22.1■■□□□ 1.13
HERPUD1-203ENST00000379792 ABCA8O94911 1581 aa22.1■■□□□ 1.13
HERPUD1-203ENST00000379792 UACAQ9BZF9 1416 aa22.1■■□□□ 1.13
HERPUD1-203ENST00000379792 ADCY10Q96PN6 1610 aa22.08■■□□□ 1.13
HERPUD1-203ENST00000379792 NUP153P49790 1475 aaKnown RBP22.07■■□□□ 1.12
HERPUD1-203ENST00000379792 NPM1P06748 294 aaKnown RBP eCLIP22.05■■□□□ 1.12
HERPUD1-203ENST00000379792 HECW1Q76N89 1606 aa22.05■■□□□ 1.12
HERPUD1-203ENST00000379792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.03■■□□□ 1.12
HERPUD1-203ENST00000379792 HNRNPUL2Q1KMD3 747 aaKnown RBP22.03■■□□□ 1.12
HERPUD1-203ENST00000379792 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
HERPUD1-203ENST00000379792 MAPKBP1O60336 1514 aa22.02■■□□□ 1.11
HERPUD1-203ENST00000379792 CDK13Q14004 1512 aaKnown RBP22.02■■□□□ 1.11
HERPUD1-203ENST00000379792 ABCC2Q92887 1545 aa22.01■■□□□ 1.11
HERPUD1-203ENST00000379792 KANK4Q5T7N3 995 aaPredicted RBP22.01■■□□□ 1.11
HERPUD1-203ENST00000379792 LRRIQ1Q96JM4 1722 aa22.01■■□□□ 1.11
HERPUD1-203ENST00000379792 UHRF1BP1LA0JNW5 1464 aa22■■□□□ 1.11
HERPUD1-203ENST00000379792 ATP10BO94823 1461 aa21.98■■□□□ 1.11
HERPUD1-203ENST00000379792 TIAM1Q13009 1591 aa21.97■■□□□ 1.11
HERPUD1-203ENST00000379792 CCDC18Q5T9S5 1454 aa21.96■■□□□ 1.11
HERPUD1-203ENST00000379792 MAP3K1Q13233 1512 aa21.93■■□□□ 1.1
HERPUD1-203ENST00000379792 CFAP43Q8NDM7 1665 aa21.92■■□□□ 1.1
HERPUD1-203ENST00000379792 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
HERPUD1-203ENST00000379792 KIF13AQ9H1H9 1805 aa21.91■■□□□ 1.1
HERPUD1-203ENST00000379792 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
HERPUD1-203ENST00000379792 MTUS2Q5JR59 1369 aa21.89■■□□□ 1.1
HERPUD1-203ENST00000379792 LRRC9Q6ZRR7 1453 aa21.89■■□□□ 1.1
HERPUD1-203ENST00000379792 MAGI3Q5TCQ9 1506 aa21.88■■□□□ 1.09
HERPUD1-203ENST00000379792 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
HERPUD1-203ENST00000379792 ZCCHC11Q5TAX3 1644 aaKnown RBP21.87■■□□□ 1.09
HERPUD1-203ENST00000379792 PLEKHD1A6NEE1 506 aa21.87■■□□□ 1.09
HERPUD1-203ENST00000379792 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
HERPUD1-203ENST00000379792 FAM69CQ0P6D2 419 aa21.84■■□□□ 1.09
HERPUD1-203ENST00000379792 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
HERPUD1-203ENST00000379792 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
HERPUD1-203ENST00000379792 KCNH8Q96L42 1107 aa21.79■■□□□ 1.08
HERPUD1-203ENST00000379792 EHBP1L1Q8N3D4 1523 aa21.79■■□□□ 1.08
HERPUD1-203ENST00000379792 GLI2P10070 1586 aa21.75■■□□□ 1.07
HERPUD1-203ENST00000379792 NCOA2Q15596 1464 aa21.73■■□□□ 1.07
HERPUD1-203ENST00000379792 WDR7Q9Y4E6 1490 aa21.72■■□□□ 1.07
HERPUD1-203ENST00000379792 KIF14Q15058 1648 aa21.72■■□□□ 1.07
HERPUD1-203ENST00000379792 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
HERPUD1-203ENST00000379792 SUPT6HQ7KZ85 1726 aaKnown RBP21.7■■□□□ 1.06
HERPUD1-203ENST00000379792 CCNB3Q8WWL7 1395 aa21.65■■□□□ 1.06
HERPUD1-203ENST00000379792 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
HERPUD1-203ENST00000379792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.62■■□□□ 1.056e-6■■■■□ 21.5
HERPUD1-203ENST00000379792 MAP3K4Q9Y6R4 1608 aa21.62■■□□□ 1.05
HERPUD1-203ENST00000379792 MYOM3Q5VTT5 1437 aa21.6■■□□□ 1.05
HERPUD1-203ENST00000379792 TTC37Q6PGP7 1564 aa21.6■■□□□ 1.05
HERPUD1-203ENST00000379792 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
HERPUD1-203ENST00000379792 GPATCH8Q9UKJ3 1502 aaKnown RBP21.59■■□□□ 1.05
HERPUD1-203ENST00000379792 PPRC1Q5VV67 1664 aaKnown RBP21.59■■□□□ 1.05
HERPUD1-203ENST00000379792 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
HERPUD1-203ENST00000379792 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
HERPUD1-203ENST00000379792 FAM50AQ14320 339 aaKnown RBP21.55■■□□□ 1.04
HERPUD1-203ENST00000379792 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
HERPUD1-203ENST00000379792 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
HERPUD1-203ENST00000379792 KDM6BO15054 1643 aa21.54■■□□□ 1.04
HERPUD1-203ENST00000379792 ZNF644Q9H582 1327 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms