RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 JPH4Q96JJ6 628 aa25.17■■□□□ 1.62
SMS-201ENST00000379404 KIAA0586Q9BVV6 1533 aa25.11■■□□□ 1.61
SMS-201ENST00000379404 PRG4Q92954 1404 aaPredicted RBP25.1■■□□□ 1.61
SMS-201ENST00000379404 RAPGEF2Q9Y4G8 1499 aa25■■□□□ 1.59
SMS-201ENST00000379404 PRXQ9BXM0 1461 aa24.91■■□□□ 1.58
SMS-201ENST00000379404 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
SMS-201ENST00000379404 IQGAP2Q13576 1575 aa24.88■■□□□ 1.57
SMS-201ENST00000379404 CSRNP3Q8WYN3 585 aa24.83■■□□□ 1.57
SMS-201ENST00000379404 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
SMS-201ENST00000379404 DISP1Q96F81 1524 aa24.8■■□□□ 1.56
SMS-201ENST00000379404 CARMIL2Q6F5E8 1435 aa24.79■■□□□ 1.56
SMS-201ENST00000379404 UGGT2Q9NYU1 1516 aa24.79■■□□□ 1.56
SMS-201ENST00000379404 PTPRGP23470 1445 aa24.78■■□□□ 1.56
SMS-201ENST00000379404 TNIKQ9UKE5 1360 aa24.77■■□□□ 1.56
SMS-201ENST00000379404 EEA1Q15075 1411 aa24.76■■□□□ 1.55
SMS-201ENST00000379404 ADCY10Q96PN6 1610 aa24.74■■□□□ 1.55
SMS-201ENST00000379404 CTTNBP2Q8WZ74 1663 aa24.71■■□□□ 1.55
SMS-201ENST00000379404 KIAA0556O60303 1618 aa24.66■■□□□ 1.54
SMS-201ENST00000379404 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
SMS-201ENST00000379404 TTBK1Q5TCY1 1321 aaPredicted RBP24.64■■□□□ 1.54
SMS-201ENST00000379404 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.54
SMS-201ENST00000379404 MAPKBP1O60336 1514 aa24.63■■□□□ 1.53
SMS-201ENST00000379404 UHRF1BP1LA0JNW5 1464 aa24.62■■□□□ 1.53
SMS-201ENST00000379404 UACAQ9BZF9 1416 aa24.6■■□□□ 1.53
SMS-201ENST00000379404 GOLGA3Q08378 1498 aa24.58■■□□□ 1.52
SMS-201ENST00000379404 ABCC2Q92887 1545 aa24.57■■□□□ 1.52
SMS-201ENST00000379404 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
SMS-201ENST00000379404 ABCC10Q5T3U5 1492 aa24.56■■□□□ 1.52
SMS-201ENST00000379404 KIF21BO75037 1637 aa24.52■■□□□ 1.52
SMS-201ENST00000379404 FAM69CQ0P6D2 419 aa24.5■■□□□ 1.51
SMS-201ENST00000379404 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
SMS-201ENST00000379404 DIP2BQ9P265 1576 aa24.48■■□□□ 1.51
SMS-201ENST00000379404 PLB1Q6P1J6 1458 aa24.47■■□□□ 1.51
SMS-201ENST00000379404 ABCA8O94911 1581 aa24.45■■□□□ 1.5
SMS-201ENST00000379404 SAMD9Q5K651 1589 aa24.45■■□□□ 1.5
SMS-201ENST00000379404 P3H3Q8IVL6 736 aa24.44■■□□□ 1.5
SMS-201ENST00000379404 ASXL2Q76L83 1435 aa24.44■■□□□ 1.5
SMS-201ENST00000379404 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.49
SMS-201ENST00000379404 GLI2P10070 1586 aa24.33■■□□□ 1.49
SMS-201ENST00000379404 RANGAP1P46060 587 aaPredicted RBP24.32■■□□□ 1.48
SMS-201ENST00000379404 EPRSP07814 1512 aaKnown RBP24.3■■□□□ 1.48
SMS-201ENST00000379404 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
SMS-201ENST00000379404 EHMT2Q96KQ7 1210 aa24.3■■□□□ 1.48
SMS-201ENST00000379404 FHOD3Q2V2M9 1422 aa24.28■■□□□ 1.48
SMS-201ENST00000379404 ATP10BO94823 1461 aa24.26■■□□□ 1.47
SMS-201ENST00000379404 WDR7Q9Y4E6 1490 aa24.26■■□□□ 1.47
SMS-201ENST00000379404 EFCAB5A4FU69 1503 aa24.26■■□□□ 1.47
SMS-201ENST00000379404 TSPOAP1O95153 1857 aa24.24■■□□□ 1.47
SMS-201ENST00000379404 RAPGEF6Q8TEU7 1601 aa24.22■■□□□ 1.47
SMS-201ENST00000379404 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
SMS-201ENST00000379404 ARID3CA6NKF2 412 aa24.19■■□□□ 1.46
SMS-201ENST00000379404 MAP3K4Q9Y6R4 1608 aa24.19■■□□□ 1.46
SMS-201ENST00000379404 NUP153P49790 1475 aaKnown RBP24.19■■□□□ 1.46
SMS-201ENST00000379404 ARHGAP35Q9NRY4 1499 aa24.17■■□□□ 1.46
SMS-201ENST00000379404 KCNH8Q96L42 1107 aa24.15■■□□□ 1.46
SMS-201ENST00000379404 KDM6BO15054 1643 aa24.1■■□□□ 1.45
SMS-201ENST00000379404 CD109Q6YHK3 1445 aa24.08■■□□□ 1.44
SMS-201ENST00000379404 COL17A1Q9UMD9 1497 aaPredicted RBP24.07■■□□□ 1.44
SMS-201ENST00000379404 MAGI3Q5TCQ9 1506 aa24.06■■□□□ 1.44
SMS-201ENST00000379404 CFAP43Q8NDM7 1665 aa24.06■■□□□ 1.44
SMS-201ENST00000379404 TEX14Q8IWB6 1497 aa24.06■■□□□ 1.44
SMS-201ENST00000379404 FMN1Q68DA7 1419 aa24.05■■□□□ 1.44
SMS-201ENST00000379404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
SMS-201ENST00000379404 HNRNPUL2Q1KMD3 747 aaKnown RBP24.04■■□□□ 1.44
SMS-201ENST00000379404 ABCA9Q8IUA7 1624 aa24■■□□□ 1.43
SMS-201ENST00000379404 PLEKHD1A6NEE1 506 aa24■■□□□ 1.43
SMS-201ENST00000379404 CDK13Q14004 1512 aaKnown RBP23.96■■□□□ 1.43
SMS-201ENST00000379404 HECW1Q76N89 1606 aa23.92■■□□□ 1.42
SMS-201ENST00000379404 CLIP1P30622 1438 aa23.92■■□□□ 1.42
SMS-201ENST00000379404 ATP1B4Q9UN42 357 aaPredicted RBP23.9■■□□□ 1.42
SMS-201ENST00000379404 CASKIN1Q8WXD9 1431 aa23.88■■□□□ 1.41
SMS-201ENST00000379404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.87■■□□□ 1.41
SMS-201ENST00000379404 ARAP3Q8WWN8 1544 aa23.87■■□□□ 1.41
SMS-201ENST00000379404 LRRIQ1Q96JM4 1722 aa23.86■■□□□ 1.41
SMS-201ENST00000379404 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
SMS-201ENST00000379404 NEO1Q92859 1461 aa23.83■■□□□ 1.41
SMS-201ENST00000379404 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
SMS-201ENST00000379404 CDK11AQ9UQ88 783 aaPredicted RBP23.81■■□□□ 1.4
SMS-201ENST00000379404 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
SMS-201ENST00000379404 TTC37Q6PGP7 1564 aa23.8■■□□□ 1.4
SMS-201ENST00000379404 TROQ12816 1431 aaPredicted RBP23.78■■□□□ 1.4
SMS-201ENST00000379404 KDM4FA0A1W2PPD8 638 aa23.78■■□□□ 1.4
SMS-201ENST00000379404 FYCO1Q9BQS8 1478 aa23.76■■□□□ 1.39
SMS-201ENST00000379404 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
SMS-201ENST00000379404 PLCH2O75038 1416 aa23.75■■□□□ 1.39
SMS-201ENST00000379404 CCDC18Q5T9S5 1454 aa23.75■■□□□ 1.39
SMS-201ENST00000379404 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
SMS-201ENST00000379404 RAPGEF3O95398 923 aa23.73■■□□□ 1.39
SMS-201ENST00000379404 AKNAQ7Z591 1439 aa23.73■■□□□ 1.39
SMS-201ENST00000379404 FANCAO15360 1455 aa23.73■■□□□ 1.39
SMS-201ENST00000379404 KIF14Q15058 1648 aa23.73■■□□□ 1.39
SMS-201ENST00000379404 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
SMS-201ENST00000379404 CFAP74Q9C0B2 1584 aa23.65■■□□□ 1.38
SMS-201ENST00000379404 DENND4BO75064 1496 aaPredicted RBP23.64■■□□□ 1.38
SMS-201ENST00000379404 RICTORQ6R327 1708 aa23.62■■□□□ 1.37
SMS-201ENST00000379404 MYO5CQ9NQX4 1742 aa23.62■■□□□ 1.37
SMS-201ENST00000379404 EFCAB2Q5VUJ9 269 aa23.62■■□□□ 1.37
SMS-201ENST00000379404 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
SMS-201ENST00000379404 SCAPERQ9BY12 1400 aa23.59■■□□□ 1.37
SMS-201ENST00000379404 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms