RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 ARAP1Q96P48 1450 aa36.75■■■■□ 3.47
GFRA3-202ENST00000378362 JPH4Q96JJ6 628 aa36.72■■■■□ 3.47
GFRA3-202ENST00000378362 RAPGEF2Q9Y4G8 1499 aa36.7■■■■□ 3.47
GFRA3-202ENST00000378362 CSRNP3Q8WYN3 585 aa36.66■■■■□ 3.46
GFRA3-202ENST00000378362 SHROOM2Q13796 1616 aa36.63■■■■□ 3.45
GFRA3-202ENST00000378362 KIAA0586Q9BVV6 1533 aa36.62■■■■□ 3.45
GFRA3-202ENST00000378362 PRG4Q92954 1404 aaPredicted RBP36.62■■■■□ 3.45
GFRA3-202ENST00000378362 PRXQ9BXM0 1461 aa36.58■■■■□ 3.45
GFRA3-202ENST00000378362 EHMT2Q96KQ7 1210 aa36.52■■■■□ 3.44
GFRA3-202ENST00000378362 EEA1Q15075 1411 aa36.47■■■■□ 3.43
GFRA3-202ENST00000378362 TTBK1Q5TCY1 1321 aaPredicted RBP36.45■■■■□ 3.43
GFRA3-202ENST00000378362 IQGAP2Q13576 1575 aa36.43■■■■□ 3.42
GFRA3-202ENST00000378362 CTTNBP2Q8WZ74 1663 aa36.31■■■■□ 3.4
GFRA3-202ENST00000378362 RANGAP1P46060 587 aaPredicted RBP36.27■■■■□ 3.4
GFRA3-202ENST00000378362 DISP1Q96F81 1524 aa36.24■■■■□ 3.39
GFRA3-202ENST00000378362 CARMIL2Q6F5E8 1435 aa36.22■■■■□ 3.39
GFRA3-202ENST00000378362 UGGT2Q9NYU1 1516 aa36.2■■■■□ 3.39
GFRA3-202ENST00000378362 PTPRGP23470 1445 aa36.17■■■■□ 3.38
GFRA3-202ENST00000378362 KIF21BO75037 1637 aa36.16■■■■□ 3.38
GFRA3-202ENST00000378362 P3H3Q8IVL6 736 aa36.15■■■■□ 3.38
GFRA3-202ENST00000378362 TNIKQ9UKE5 1360 aa36.14■■■■□ 3.38
GFRA3-202ENST00000378362 UBTFP17480 764 aaKnown RBP36.12■■■■□ 3.37
GFRA3-202ENST00000378362 KIAA0556O60303 1618 aa36.1■■■■□ 3.37
GFRA3-202ENST00000378362 TRHP20396 242 aaPredicted RBP36.1■■■■□ 3.37
GFRA3-202ENST00000378362 ADCY10Q96PN6 1610 aa36.02■■■■□ 3.36
GFRA3-202ENST00000378362 GOLGA3Q08378 1498 aa36■■■■□ 3.35
GFRA3-202ENST00000378362 NPM1P06748 294 aaKnown RBP eCLIP35.92■■■■□ 3.34
GFRA3-202ENST00000378362 UACAQ9BZF9 1416 aa35.88■■■■□ 3.33
GFRA3-202ENST00000378362 PLB1Q6P1J6 1458 aa35.87■■■■□ 3.33
GFRA3-202ENST00000378362 SAMD9Q5K651 1589 aa35.84■■■■□ 3.33
GFRA3-202ENST00000378362 FHOD3Q2V2M9 1422 aa35.81■■■■□ 3.32
GFRA3-202ENST00000378362 ARID3CA6NKF2 412 aa35.8■■■■□ 3.32
GFRA3-202ENST00000378362 ABCC2Q92887 1545 aa35.78■■■■□ 3.32
GFRA3-202ENST00000378362 UHRF1BP1LA0JNW5 1464 aa35.74■■■■□ 3.31
GFRA3-202ENST00000378362 ABCA8O94911 1581 aa35.69■■■■□ 3.3
GFRA3-202ENST00000378362 LOC105371045A0A1W2PR82 267 aa35.69■■■■□ 3.3
GFRA3-202ENST00000378362 MAPKBP1O60336 1514 aa35.65■■■■□ 3.3
GFRA3-202ENST00000378362 FAM69CQ0P6D2 419 aa35.65■■■■□ 3.3
GFRA3-202ENST00000378362 ARHGAP35Q9NRY4 1499 aa35.64■■■■□ 3.3
GFRA3-202ENST00000378362 KDM5BQ9UGL1 1544 aa35.63■■■■□ 3.29
GFRA3-202ENST00000378362 EFCAB5A4FU69 1503 aa35.62■■■■□ 3.29
GFRA3-202ENST00000378362 ZCCHC11Q5TAX3 1644 aaKnown RBP35.62■■■■□ 3.29
GFRA3-202ENST00000378362 ASXL2Q76L83 1435 aa35.61■■■■□ 3.29
GFRA3-202ENST00000378362 KIF13AQ9H1H9 1805 aa35.6■■■■□ 3.29
GFRA3-202ENST00000378362 ABCC10Q5T3U5 1492 aa35.56■■■■□ 3.28
GFRA3-202ENST00000378362 RAPGEF6Q8TEU7 1601 aa35.53■■■■□ 3.28
GFRA3-202ENST00000378362 DIP2BQ9P265 1576 aa35.51■■■■□ 3.28
GFRA3-202ENST00000378362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.5■■■■□ 3.27
GFRA3-202ENST00000378362 HNRNPUL2Q1KMD3 747 aaKnown RBP35.5■■■■□ 3.27
GFRA3-202ENST00000378362 ATP1B4Q9UN42 357 aaPredicted RBP35.5■■■■□ 3.27
GFRA3-202ENST00000378362 ATP10BO94823 1461 aa35.49■■■■□ 3.27
GFRA3-202ENST00000378362 KCNH8Q96L42 1107 aa35.46■■■■□ 3.27
GFRA3-202ENST00000378362 NUP153P49790 1475 aaKnown RBP35.46■■■■□ 3.27
GFRA3-202ENST00000378362 CLIP1P30622 1438 aa35.44■■■■□ 3.26
GFRA3-202ENST00000378362 TSPOAP1O95153 1857 aa35.41■■■■□ 3.26
GFRA3-202ENST00000378362 WDR7Q9Y4E6 1490 aa35.38■■■■□ 3.25
GFRA3-202ENST00000378362 EPRSP07814 1512 aaKnown RBP35.36■■■■□ 3.25
GFRA3-202ENST00000378362 FMN1Q68DA7 1419 aa35.36■■■■□ 3.25
GFRA3-202ENST00000378362 CEP162Q5TB80 1403 aa35.31■■■■□ 3.24
GFRA3-202ENST00000378362 CDK13Q14004 1512 aaKnown RBP35.29■■■■□ 3.24
GFRA3-202ENST00000378362 GLI2P10070 1586 aa35.23■■■■□ 3.23
GFRA3-202ENST00000378362 PLEKHD1A6NEE1 506 aa35.19■■■■□ 3.22
GFRA3-202ENST00000378362 PCF11O94913 1555 aaKnown RBP35.18■■■■□ 3.22
GFRA3-202ENST00000378362 HECW1Q76N89 1606 aa35.18■■■■□ 3.22
GFRA3-202ENST00000378362 LRRIQ1Q96JM4 1722 aa35.16■■■■□ 3.22
GFRA3-202ENST00000378362 MAP3K4Q9Y6R4 1608 aa35.14■■■■□ 3.22
GFRA3-202ENST00000378362 PPRC1Q5VV67 1664 aaKnown RBP35.14■■■■□ 3.22
GFRA3-202ENST00000378362 CASKIN1Q8WXD9 1431 aa35.12■■■■□ 3.21
GFRA3-202ENST00000378362 CD109Q6YHK3 1445 aa35.11■■■■□ 3.21
GFRA3-202ENST00000378362 CFAP43Q8NDM7 1665 aa35.01■■■■□ 3.19
GFRA3-202ENST00000378362 FYCO1Q9BQS8 1478 aa35■■■■□ 3.19
GFRA3-202ENST00000378362 CDK11AQ9UQ88 783 aaPredicted RBP34.97■■■■□ 3.19
GFRA3-202ENST00000378362 ABCA9Q8IUA7 1624 aa34.97■■■■□ 3.19
GFRA3-202ENST00000378362 KDM6BO15054 1643 aa34.94■■■■□ 3.18
GFRA3-202ENST00000378362 COL17A1Q9UMD9 1497 aaPredicted RBP34.93■■■■□ 3.18
GFRA3-202ENST00000378362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.92■■■■□ 3.18
GFRA3-202ENST00000378362 TEX14Q8IWB6 1497 aa34.92■■■■□ 3.18
GFRA3-202ENST00000378362 MAGI3Q5TCQ9 1506 aa34.91■■■■□ 3.18
GFRA3-202ENST00000378362 CCDC18Q5T9S5 1454 aa34.91■■■■□ 3.18
GFRA3-202ENST00000378362 TTC37Q6PGP7 1564 aa34.9■■■■□ 3.18
GFRA3-202ENST00000378362 KIF14Q15058 1648 aa34.88■■■■□ 3.17
GFRA3-202ENST00000378362 TROQ12816 1431 aaPredicted RBP34.88■■■■□ 3.17
GFRA3-202ENST00000378362 VPS8Q8N3P4 1428 aa34.81■■■■□ 3.16
GFRA3-202ENST00000378362 RAPGEF3O95398 923 aa34.71■■■■□ 3.15
GFRA3-202ENST00000378362 MTUS2Q5JR59 1369 aa34.7■■■■□ 3.15
GFRA3-202ENST00000378362 FANCAO15360 1455 aa34.7■■■■□ 3.15
GFRA3-202ENST00000378362 PLCH2O75038 1416 aa34.69■■■■□ 3.14
GFRA3-202ENST00000378362 MYO5CQ9NQX4 1742 aa34.65■■■■□ 3.14
GFRA3-202ENST00000378362 NEO1Q92859 1461 aa34.65■■■■□ 3.14
GFRA3-202ENST00000378362 AKNAQ7Z591 1439 aa34.64■■■■□ 3.14
GFRA3-202ENST00000378362 ARAP3Q8WWN8 1544 aa34.61■■■■□ 3.13
GFRA3-202ENST00000378362 KANK4Q5T7N3 995 aaPredicted RBP34.6■■■■□ 3.13
GFRA3-202ENST00000378362 EFCAB2Q5VUJ9 269 aa34.59■■■■□ 3.13
GFRA3-202ENST00000378362 ARHGAP5Q13017 1502 aa34.58■■■■□ 3.13
GFRA3-202ENST00000378362 TIAM1Q13009 1591 aa34.58■■■■□ 3.13
GFRA3-202ENST00000378362 CDC42BPBQ9Y5S2 1711 aa34.56■■■■□ 3.12
GFRA3-202ENST00000378362 PHLDB1Q86UU1 1377 aa34.55■■■■□ 3.12
GFRA3-202ENST00000378362 ZNF777Q9ULD5 760 aaPredicted RBP34.54■■■■□ 3.12
GFRA3-202ENST00000378362 CDC42BPAQ5VT25 1732 aa34.53■■■■□ 3.12
GFRA3-202ENST00000378362 ADGRL1O94910 1474 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms