RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 UBTFP17480 764 aaKnown RBP36.8■■■■□ 3.48
CBWD1-203ENST00000377400 KIAA0586Q9BVV6 1533 aa36.79■■■■□ 3.48
CBWD1-203ENST00000377400 DNAJC5Q9H3Z4 198 aa36.73■■■■□ 3.47
CBWD1-203ENST00000377400 CTTNBP2Q8WZ74 1663 aa36.7■■■■□ 3.47
CBWD1-203ENST00000377400 IQGAP2Q13576 1575 aa36.7■■■■□ 3.47
CBWD1-203ENST00000377400 JPH4Q96JJ6 628 aa36.69■■■■□ 3.46
CBWD1-203ENST00000377400 RANGAP1P46060 587 aaPredicted RBP36.61■■■■□ 3.45
CBWD1-203ENST00000377400 SHROOM2Q13796 1616 aa36.57■■■■□ 3.45
CBWD1-203ENST00000377400 PRG4Q92954 1404 aaPredicted RBP36.57■■■■□ 3.44
CBWD1-203ENST00000377400 LOC105371045A0A1W2PR82 267 aa36.54■■■■□ 3.44
CBWD1-203ENST00000377400 ARHGEF11O15085 1522 aa36.54■■■■□ 3.44
CBWD1-203ENST00000377400 RIMBP3CA6NJZ7 1639 aa36.46■■■■□ 3.43
CBWD1-203ENST00000377400 RIMBP3BA6NNM3 1639 aa36.46■■■■□ 3.43
CBWD1-203ENST00000377400 RIMBP3Q9UFD9 1639 aa36.46■■■■□ 3.43
CBWD1-203ENST00000377400 CARMIL2Q6F5E8 1435 aa36.46■■■■□ 3.43
CBWD1-203ENST00000377400 UGGT2Q9NYU1 1516 aa36.46■■■■□ 3.43
CBWD1-203ENST00000377400 ERCC6L2Q5T890 1561 aa36.44■■■■□ 3.42
CBWD1-203ENST00000377400 TNIKQ9UKE5 1360 aa36.41■■■■□ 3.42
CBWD1-203ENST00000377400 TTBK1Q5TCY1 1321 aaPredicted RBP36.39■■■■□ 3.42
CBWD1-203ENST00000377400 DISP1Q96F81 1524 aa36.35■■■■□ 3.41
CBWD1-203ENST00000377400 P3H3Q8IVL6 736 aa36.35■■■■□ 3.41
CBWD1-203ENST00000377400 KIAA0556O60303 1618 aa36.32■■■■□ 3.4
CBWD1-203ENST00000377400 CYB5RLQ6IPT4 315 aa36.29■■■■□ 3.4
CBWD1-203ENST00000377400 ARAP1Q96P48 1450 aa36.27■■■■□ 3.4
CBWD1-203ENST00000377400 SAMD9Q5K651 1589 aa36.23■■■■□ 3.39
CBWD1-203ENST00000377400 EFCAB5A4FU69 1503 aa36.23■■■■□ 3.39
CBWD1-203ENST00000377400 PTPRGP23470 1445 aa36.22■■■■□ 3.39
CBWD1-203ENST00000377400 CLIP1P30622 1438 aa36.18■■■■□ 3.38
CBWD1-203ENST00000377400 FHOD3Q2V2M9 1422 aa36.16■■■■□ 3.38
CBWD1-203ENST00000377400 CEP162Q5TB80 1403 aa36.16■■■■□ 3.38
CBWD1-203ENST00000377400 ARHGAP35Q9NRY4 1499 aa36.14■■■■□ 3.38
CBWD1-203ENST00000377400 UACAQ9BZF9 1416 aa35.97■■■■□ 3.35
CBWD1-203ENST00000377400 PLB1Q6P1J6 1458 aa35.95■■■■□ 3.35
CBWD1-203ENST00000377400 FMN1Q68DA7 1419 aa35.93■■■■□ 3.34
CBWD1-203ENST00000377400 ATP1B4Q9UN42 357 aaPredicted RBP35.89■■■■□ 3.34
CBWD1-203ENST00000377400 NPM1P06748 294 aaKnown RBP eCLIP35.87■■■■□ 3.33
CBWD1-203ENST00000377400 ADCY10Q96PN6 1610 aa35.87■■■■□ 3.33
CBWD1-203ENST00000377400 ABCC2Q92887 1545 aa35.86■■■■□ 3.33
CBWD1-203ENST00000377400 ABCA8O94911 1581 aa35.85■■■■□ 3.33
CBWD1-203ENST00000377400 RAPGEF6Q8TEU7 1601 aa35.83■■■■□ 3.33
CBWD1-203ENST00000377400 ARID3CA6NKF2 412 aa35.82■■■■□ 3.33
CBWD1-203ENST00000377400 UHRF1BP1LA0JNW5 1464 aa35.82■■■■□ 3.32
CBWD1-203ENST00000377400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.74■■■■□ 3.31
CBWD1-203ENST00000377400 HNRNPUL2Q1KMD3 747 aaKnown RBP35.74■■■■□ 3.31
CBWD1-203ENST00000377400 PCF11O94913 1555 aaKnown RBP35.69■■■■□ 3.3
CBWD1-203ENST00000377400 NUP153P49790 1475 aaKnown RBP35.68■■■■□ 3.3
CBWD1-203ENST00000377400 HECW1Q76N89 1606 aa35.68■■■■□ 3.3
CBWD1-203ENST00000377400 CASKIN1Q8WXD9 1431 aa35.68■■■■□ 3.3
CBWD1-203ENST00000377400 KDM5BQ9UGL1 1544 aa35.66■■■■□ 3.3
CBWD1-203ENST00000377400 VPS8Q8N3P4 1428 aa35.66■■■■□ 3.3
CBWD1-203ENST00000377400 FYCO1Q9BQS8 1478 aa35.63■■■■□ 3.29
CBWD1-203ENST00000377400 ZCCHC11Q5TAX3 1644 aaKnown RBP35.63■■■■□ 3.29
CBWD1-203ENST00000377400 ATP10BO94823 1461 aa35.6■■■■□ 3.29
CBWD1-203ENST00000377400 EPRSP07814 1512 aaKnown RBP35.55■■■■□ 3.28
CBWD1-203ENST00000377400 CDK13Q14004 1512 aaKnown RBP35.54■■■■□ 3.28
CBWD1-203ENST00000377400 ASXL2Q76L83 1435 aa35.52■■■■□ 3.28
CBWD1-203ENST00000377400 MAPKBP1O60336 1514 aa35.51■■■■□ 3.28
CBWD1-203ENST00000377400 CCDC18Q5T9S5 1454 aa35.5■■■■□ 3.27
CBWD1-203ENST00000377400 PLEKHD1A6NEE1 506 aa35.46■■■■□ 3.27
CBWD1-203ENST00000377400 CDK11AQ9UQ88 783 aaPredicted RBP35.46■■■■□ 3.27
CBWD1-203ENST00000377400 LRRIQ1Q96JM4 1722 aa35.44■■■■□ 3.26
CBWD1-203ENST00000377400 TRHP20396 242 aaPredicted RBP35.43■■■■□ 3.26
CBWD1-203ENST00000377400 APLP2Q06481 763 aa35.43■■■■□ 3.26
CBWD1-203ENST00000377400 WDR7Q9Y4E6 1490 aa35.42■■■■□ 3.26
CBWD1-203ENST00000377400 KCNH8Q96L42 1107 aa35.41■■■■□ 3.26
CBWD1-203ENST00000377400 FAM69CQ0P6D2 419 aa35.33■■■■□ 3.25
CBWD1-203ENST00000377400 ABCC10Q5T3U5 1492 aa35.3■■■■□ 3.24
CBWD1-203ENST00000377400 MTUS2Q5JR59 1369 aa35.28■■■■□ 3.24
CBWD1-203ENST00000377400 TIAM1Q13009 1591 aa35.27■■■■□ 3.24
CBWD1-203ENST00000377400 CFAP43Q8NDM7 1665 aa35.25■■■■□ 3.23
CBWD1-203ENST00000377400 DIP2BQ9P265 1576 aa35.25■■■■□ 3.23
CBWD1-203ENST00000377400 TROQ12816 1431 aaPredicted RBP35.25■■■■□ 3.23
CBWD1-203ENST00000377400 MAGI3Q5TCQ9 1506 aa35.2■■■■□ 3.23
CBWD1-203ENST00000377400 MAP3K1Q13233 1512 aa35.19■■■■□ 3.22
CBWD1-203ENST00000377400 KIF13AQ9H1H9 1805 aa35.16■■■■□ 3.22
CBWD1-203ENST00000377400 KIF14Q15058 1648 aa35.15■■■■□ 3.22
CBWD1-203ENST00000377400 EHBP1L1Q8N3D4 1523 aa35.14■■■■□ 3.22
CBWD1-203ENST00000377400 GLI2P10070 1586 aa35.13■■■■□ 3.21
CBWD1-203ENST00000377400 KANK4Q5T7N3 995 aaPredicted RBP35.13■■■■□ 3.21
CBWD1-203ENST00000377400 LRRC9Q6ZRR7 1453 aa35.13■■■■□ 3.21
CBWD1-203ENST00000377400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.07■■■■□ 3.2
CBWD1-203ENST00000377400 CD109Q6YHK3 1445 aa35.07■■■■□ 3.2
CBWD1-203ENST00000377400 ABCA9Q8IUA7 1624 aa35.05■■■■□ 3.2
CBWD1-203ENST00000377400 TTC37Q6PGP7 1564 aa35.03■■■■□ 3.2
CBWD1-203ENST00000377400 TSPOAP1O95153 1857 aa35.02■■■■□ 3.2
CBWD1-203ENST00000377400 PPARGC1BQ86YN6 1023 aaKnown RBP35.02■■■■□ 3.2
CBWD1-203ENST00000377400 MAP3K4Q9Y6R4 1608 aa35.01■■■■□ 3.2
CBWD1-203ENST00000377400 SUPT6HQ7KZ85 1726 aaKnown RBP35■■■■□ 3.19
CBWD1-203ENST00000377400 CCNB3Q8WWL7 1395 aa34.95■■■■□ 3.19
CBWD1-203ENST00000377400 NCOA2Q15596 1464 aa34.94■■■■□ 3.18
CBWD1-203ENST00000377400 MYO5CQ9NQX4 1742 aa34.9■■■■□ 3.18
CBWD1-203ENST00000377400 TEX14Q8IWB6 1497 aa34.89■■■■□ 3.18
CBWD1-203ENST00000377400 PLCH2O75038 1416 aa34.87■■■■□ 3.17
CBWD1-203ENST00000377400 ARHGAP5Q13017 1502 aa34.85■■■■□ 3.17
CBWD1-203ENST00000377400 PPRC1Q5VV67 1664 aaKnown RBP34.83■■■■□ 3.17
CBWD1-203ENST00000377400 GPATCH8Q9UKJ3 1502 aaKnown RBP34.83■■■■□ 3.17
CBWD1-203ENST00000377400 CFDP1Q9UEE9 299 aaPredicted RBP34.82■■■■□ 3.17
CBWD1-203ENST00000377400 EFCAB2Q5VUJ9 269 aa34.82■■■■□ 3.16
CBWD1-203ENST00000377400 FANCAO15360 1455 aa34.81■■■■□ 3.16
CBWD1-203ENST00000377400 ZNF777Q9ULD5 760 aaPredicted RBP34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms