RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
UBE4B-203ENST00000377153 CTTNBP2Q8WZ74 1663 aa24.15■■□□□ 1.46
UBE4B-203ENST00000377153 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
UBE4B-203ENST00000377153 KIAA0586Q9BVV6 1533 aa24.12■■□□□ 1.45
UBE4B-203ENST00000377153 CSRNP3Q8WYN3 585 aa24.1■■□□□ 1.45
UBE4B-203ENST00000377153 IQGAP2Q13576 1575 aa24.1■■□□□ 1.45
UBE4B-203ENST00000377153 KIF21BO75037 1637 aa24.06■■□□□ 1.44
UBE4B-203ENST00000377153 FAM9AQ8IZU1 332 aaPredicted RBP24.06■■□□□ 1.44
UBE4B-203ENST00000377153 ARAP1Q96P48 1450 aa24.01■■□□□ 1.43
UBE4B-203ENST00000377153 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
UBE4B-203ENST00000377153 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
UBE4B-203ENST00000377153 JPH4Q96JJ6 628 aa23.98■■□□□ 1.43
UBE4B-203ENST00000377153 CARMIL2Q6F5E8 1435 aa23.91■■□□□ 1.42
UBE4B-203ENST00000377153 UGGT2Q9NYU1 1516 aa23.9■■□□□ 1.42
UBE4B-203ENST00000377153 GOLGA3Q08378 1498 aa23.89■■□□□ 1.42
UBE4B-203ENST00000377153 CYB5RLQ6IPT4 315 aa23.89■■□□□ 1.41
UBE4B-203ENST00000377153 KIAA0556O60303 1618 aa23.86■■□□□ 1.41
UBE4B-203ENST00000377153 DISP1Q96F81 1524 aa23.81■■□□□ 1.4
UBE4B-203ENST00000377153 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
UBE4B-203ENST00000377153 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
UBE4B-203ENST00000377153 UBTFP17480 764 aaKnown RBP23.74■■□□□ 1.39
UBE4B-203ENST00000377153 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
UBE4B-203ENST00000377153 PTPRGP23470 1445 aa23.72■■□□□ 1.39
UBE4B-203ENST00000377153 EFCAB5A4FU69 1503 aa23.7■■□□□ 1.38
UBE4B-203ENST00000377153 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
UBE4B-203ENST00000377153 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
UBE4B-203ENST00000377153 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
UBE4B-203ENST00000377153 ABCC2Q92887 1545 aa23.6■■□□□ 1.37
UBE4B-203ENST00000377153 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
UBE4B-203ENST00000377153 UHRF1BP1LA0JNW5 1464 aa23.57■■□□□ 1.36
UBE4B-203ENST00000377153 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
UBE4B-203ENST00000377153 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
UBE4B-203ENST00000377153 ABCA8O94911 1581 aa23.53■■□□□ 1.36
UBE4B-203ENST00000377153 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
UBE4B-203ENST00000377153 RAPGEF6Q8TEU7 1601 aa23.51■■□□□ 1.35
UBE4B-203ENST00000377153 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
UBE4B-203ENST00000377153 MAPKBP1O60336 1514 aa23.51■■□□□ 1.35
UBE4B-203ENST00000377153 ZCCHC11Q5TAX3 1644 aaKnown RBP23.49■■□□□ 1.35
UBE4B-203ENST00000377153 ARHGAP35Q9NRY4 1499 aa23.48■■□□□ 1.35
UBE4B-203ENST00000377153 KDM5BQ9UGL1 1544 aa23.45■■□□□ 1.34
UBE4B-203ENST00000377153 CLIP1P30622 1438 aa23.43■■□□□ 1.34
UBE4B-203ENST00000377153 FMN1Q68DA7 1419 aa23.43■■□□□ 1.34
UBE4B-203ENST00000377153 TRHP20396 242 aaPredicted RBP23.42■■□□□ 1.34
UBE4B-203ENST00000377153 KIF13AQ9H1H9 1805 aa23.39■■□□□ 1.33
UBE4B-203ENST00000377153 HECW1Q76N89 1606 aa23.38■■□□□ 1.33
UBE4B-203ENST00000377153 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
UBE4B-203ENST00000377153 DIP2BQ9P265 1576 aa23.35■■□□□ 1.33
UBE4B-203ENST00000377153 ASXL2Q76L83 1435 aa23.34■■□□□ 1.33
UBE4B-203ENST00000377153 NUP153P49790 1475 aaKnown RBP23.33■■□□□ 1.33
UBE4B-203ENST00000377153 ABCC10Q5T3U5 1492 aa23.32■■□□□ 1.32
UBE4B-203ENST00000377153 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
UBE4B-203ENST00000377153 LOC105371045A0A1W2PR82 267 aa23.3■■□□□ 1.32
UBE4B-203ENST00000377153 WDR7Q9Y4E6 1490 aa23.3■■□□□ 1.32
UBE4B-203ENST00000377153 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
UBE4B-203ENST00000377153 ATP10BO94823 1461 aa23.27■■□□□ 1.32
UBE4B-203ENST00000377153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
UBE4B-203ENST00000377153 HNRNPUL2Q1KMD3 747 aaKnown RBP23.25■■□□□ 1.31
UBE4B-203ENST00000377153 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
UBE4B-203ENST00000377153 GLI2P10070 1586 aa23.23■■□□□ 1.31
UBE4B-203ENST00000377153 ATP1B4Q9UN42 357 aaPredicted RBP23.22■■□□□ 1.31
UBE4B-203ENST00000377153 CASKIN1Q8WXD9 1431 aa23.22■■□□□ 1.31
UBE4B-203ENST00000377153 LRRIQ1Q96JM4 1722 aa23.22■■□□□ 1.31
UBE4B-203ENST00000377153 FAM69CQ0P6D2 419 aa23.21■■□□□ 1.31
UBE4B-203ENST00000377153 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
UBE4B-203ENST00000377153 TSPOAP1O95153 1857 aa23.2■■□□□ 1.3
UBE4B-203ENST00000377153 CDK13Q14004 1512 aaKnown RBP23.2■■□□□ 1.3
UBE4B-203ENST00000377153 CCDC18Q5T9S5 1454 aa23.2■■□□□ 1.3
UBE4B-203ENST00000377153 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
UBE4B-203ENST00000377153 MAP3K4Q9Y6R4 1608 aa23.18■■□□□ 1.3
UBE4B-203ENST00000377153 ABCA9Q8IUA7 1624 aa23.11■■□□□ 1.29
UBE4B-203ENST00000377153 PLEKHD1A6NEE1 506 aa23.1■■□□□ 1.29
UBE4B-203ENST00000377153 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
UBE4B-203ENST00000377153 CDK11AQ9UQ88 783 aaPredicted RBP23.1■■□□□ 1.29
UBE4B-203ENST00000377153 VPS8Q8N3P4 1428 aa23.08■■□□□ 1.29
UBE4B-203ENST00000377153 KIF14Q15058 1648 aa23.08■■□□□ 1.29
UBE4B-203ENST00000377153 PPRC1Q5VV67 1664 aaKnown RBP23.08■■□□□ 1.29
UBE4B-203ENST00000377153 TEX14Q8IWB6 1497 aa23.07■■□□□ 1.28
UBE4B-203ENST00000377153 CD109Q6YHK3 1445 aa23.02■■□□□ 1.28
UBE4B-203ENST00000377153 TROQ12816 1431 aaPredicted RBP23.01■■□□□ 1.27
UBE4B-203ENST00000377153 TTC37Q6PGP7 1564 aa23.01■■□□□ 1.27
UBE4B-203ENST00000377153 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
UBE4B-203ENST00000377153 KDM6BO15054 1643 aa22.99■■□□□ 1.27
UBE4B-203ENST00000377153 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
UBE4B-203ENST00000377153 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.271e-7■■■□□ 15.5
UBE4B-203ENST00000377153 CFAP74Q9C0B2 1584 aa22.97■■□□□ 1.27
UBE4B-203ENST00000377153 TIAM1Q13009 1591 aa22.95■■□□□ 1.26
UBE4B-203ENST00000377153 EHBP1L1Q8N3D4 1523 aa22.95■■□□□ 1.26
UBE4B-203ENST00000377153 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
UBE4B-203ENST00000377153 MAP3K1Q13233 1512 aa22.87■■□□□ 1.25
UBE4B-203ENST00000377153 PREX2Q70Z35 1606 aa22.87■■□□□ 1.25
UBE4B-203ENST00000377153 SUPT6HQ7KZ85 1726 aaKnown RBP22.87■■□□□ 1.25
UBE4B-203ENST00000377153 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
UBE4B-203ENST00000377153 NEO1Q92859 1461 aa22.86■■□□□ 1.25
UBE4B-203ENST00000377153 CDC42BPAQ5VT25 1732 aa22.85■■□□□ 1.25
UBE4B-203ENST00000377153 FANCAO15360 1455 aa22.85■■□□□ 1.25
UBE4B-203ENST00000377153 ITSN2Q9NZM3 1697 aa22.84■■□□□ 1.25
UBE4B-203ENST00000377153 APLP2Q06481 763 aa22.84■■□□□ 1.25
UBE4B-203ENST00000377153 ARHGAP5Q13017 1502 aa22.83■■□□□ 1.25
UBE4B-203ENST00000377153 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
UBE4B-203ENST00000377153 PLCH2O75038 1416 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms