RNA–Protein interactions for RNA: ENST00000376279.7

PCCA-201, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2 BASIC

Gene PCCA, Length 2,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-201ENST00000376279 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
PCCA-201ENST00000376279 FHAD1B1AJZ9 1412 aa28.32■■■□□ 2.12
PCCA-201ENST00000376279 TDRD9Q8NDG6 1382 aaKnown RBP28.3■■■□□ 2.12
PCCA-201ENST00000376279 DHX57Q6P158 1386 aaKnown RBP28.29■■■□□ 2.12
PCCA-201ENST00000376279 LRRC9Q6ZRR7 1453 aa28.27■■■□□ 2.12
PCCA-201ENST00000376279 FHOD3Q2V2M9 1422 aa28.27■■■□□ 2.12
PCCA-201ENST00000376279 PCF11O94913 1555 aaKnown RBP28.25■■■□□ 2.11
PCCA-201ENST00000376279 KIF21AQ7Z4S6 1674 aa28.24■■■□□ 2.11
PCCA-201ENST00000376279 ITGAEP38570 1179 aa28.23■■■□□ 2.11
PCCA-201ENST00000376279 ABCA5Q8WWZ7 1642 aa28.23■■■□□ 2.11
PCCA-201ENST00000376279 CLSPNQ9HAW4 1339 aa28.23■■■□□ 2.11
PCCA-201ENST00000376279 EFCAB5A4FU69 1503 aa28.23■■■□□ 2.11
PCCA-201ENST00000376279 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
PCCA-201ENST00000376279 CTTNBP2Q8WZ74 1663 aa28.22■■■□□ 2.11
PCCA-201ENST00000376279 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
PCCA-201ENST00000376279 CFAP43Q8NDM7 1665 aa28.18■■■□□ 2.1
PCCA-201ENST00000376279 PHLDB1Q86UU1 1377 aa28.16■■■□□ 2.1
PCCA-201ENST00000376279 FYCO1Q9BQS8 1478 aa28.14■■■□□ 2.09
PCCA-201ENST00000376279 CASKIN1Q8WXD9 1431 aa28.13■■■□□ 2.09
PCCA-201ENST00000376279 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.09
PCCA-201ENST00000376279 TARBP1Q13395 1621 aaKnown RBP28.08■■■□□ 2.09
PCCA-201ENST00000376279 ACIN1Q9UKV3 1341 aaKnown RBP28.07■■■□□ 2.08
PCCA-201ENST00000376279 FMN1Q68DA7 1419 aa28.06■■■□□ 2.08
PCCA-201ENST00000376279 NEUROD1Q13562 356 aa28.05■■■□□ 2.08
PCCA-201ENST00000376279 FAM50AQ14320 339 aaKnown RBP28.04■■■□□ 2.08
PCCA-201ENST00000376279 RAB3GAP2Q9H2M9 1393 aa28.03■■■□□ 2.08
PCCA-201ENST00000376279 SAMD9Q5K651 1589 aa28■■■□□ 2.07
PCCA-201ENST00000376279 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
PCCA-201ENST00000376279 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
PCCA-201ENST00000376279 MRC2Q9UBG0 1479 aa27.95■■■□□ 2.06
PCCA-201ENST00000376279 PBRM1Q86U86 1689 aa27.9■■■□□ 2.06
PCCA-201ENST00000376279 MIER1Q8N108 512 aa27.88■■■□□ 2.05
PCCA-201ENST00000376279 CENPBP07199 599 aaPredicted RBP27.87■■■□□ 2.05
PCCA-201ENST00000376279 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
PCCA-201ENST00000376279 GTF3C3Q9Y5Q9 886 aa27.86■■■□□ 2.05
PCCA-201ENST00000376279 GRIN2BQ13224 1484 aa27.86■■■□□ 2.05
PCCA-201ENST00000376279 MAPKBP1O60336 1514 aa27.85■■■□□ 2.05
PCCA-201ENST00000376279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.84■■■□□ 2.05
PCCA-201ENST00000376279 LRRIQ1Q96JM4 1722 aa27.84■■■□□ 2.05
PCCA-201ENST00000376279 FGD6Q6ZV73 1430 aa27.81■■■□□ 2.04
PCCA-201ENST00000376279 ADAMTS12P58397 1594 aa27.81■■■□□ 2.04
PCCA-201ENST00000376279 THOC2Q8NI27 1593 aaKnown RBP27.77■■■□□ 2.04
PCCA-201ENST00000376279 IQGAP2Q13576 1575 aa27.75■■■□□ 2.03
PCCA-201ENST00000376279 ZNF608Q9ULD9 1512 aaPredicted RBP27.75■■■□□ 2.03
PCCA-201ENST00000376279 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
PCCA-201ENST00000376279 NCOA2Q15596 1464 aa27.73■■■□□ 2.03
PCCA-201ENST00000376279 WDR62O43379 1518 aa27.72■■■□□ 2.03
PCCA-201ENST00000376279 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.03
PCCA-201ENST00000376279 EHBP1L1Q8N3D4 1523 aa27.68■■■□□ 2.02
PCCA-201ENST00000376279 MYOM3Q5VTT5 1437 aa27.68■■■□□ 2.02
PCCA-201ENST00000376279 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
PCCA-201ENST00000376279 SIN3AQ96ST3 1273 aa27.66■■■□□ 2.02
PCCA-201ENST00000376279 CCDC18Q5T9S5 1454 aa27.65■■■□□ 2.02
PCCA-201ENST00000376279 MAGI3Q5TCQ9 1506 aa27.65■■■□□ 2.02
PCCA-201ENST00000376279 PTPRKQ15262 1439 aa27.64■■■□□ 2.02
PCCA-201ENST00000376279 HECW1Q76N89 1606 aa27.62■■■□□ 2.01
PCCA-201ENST00000376279 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
PCCA-201ENST00000376279 ARHGEF11O15085 1522 aa27.58■■■□□ 2.01
PCCA-201ENST00000376279 EPRSP07814 1512 aaKnown RBP27.57■■■□□ 2
PCCA-201ENST00000376279 ERCC6Q03468 1493 aa27.56■■■□□ 2
PCCA-201ENST00000376279 HFM1A2PYH4 1435 aa27.56■■■□□ 2
PCCA-201ENST00000376279 PTPN23Q9H3S7 1636 aa27.54■■■□□ 2
PCCA-201ENST00000376279 EIF4G3O43432 1585 aaKnown RBP27.54■■■□□ 2
PCCA-201ENST00000376279 CDK13Q14004 1512 aaKnown RBP27.53■■■□□ 2
PCCA-201ENST00000376279 KIAA0586Q9BVV6 1533 aa27.53■■■□□ 2
PCCA-201ENST00000376279 ARID3CA6NKF2 412 aa27.52■■■□□ 2
PCCA-201ENST00000376279 NAIPQ13075 1403 aa27.5■■□□□ 1.99
PCCA-201ENST00000376279 GRIN2AQ12879 1464 aa27.5■■□□□ 1.99
PCCA-201ENST00000376279 TIMELESSQ9UNS1 1208 aa27.49■■□□□ 1.99
PCCA-201ENST00000376279 DISP1Q96F81 1524 aa27.47■■□□□ 1.99
PCCA-201ENST00000376279 UACAQ9BZF9 1416 aa27.46■■□□□ 1.99
PCCA-201ENST00000376279 KIAA0556O60303 1618 aa27.45■■□□□ 1.99
PCCA-201ENST00000376279 TCOF1Q13428 1488 aaKnown RBP27.45■■□□□ 1.98
PCCA-201ENST00000376279 CHIC2Q9UKJ5 165 aa27.4■■□□□ 1.98
PCCA-201ENST00000376279 PPP1R15AO75807 674 aaPredicted RBP27.39■■□□□ 1.98
PCCA-201ENST00000376279 RRP7BPQ9NSQ0 103 aa27.39■■□□□ 1.97
PCCA-201ENST00000376279 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
PCCA-201ENST00000376279 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
PCCA-201ENST00000376279 MIA2Q96PC5 1412 aa27.37■■□□□ 1.97
PCCA-201ENST00000376279 NUP153P49790 1475 aaKnown RBP27.35■■□□□ 1.97
PCCA-201ENST00000376279 SYNJ2O15056 1496 aa27.33■■□□□ 1.97
PCCA-201ENST00000376279 FBLN2P98095 1184 aa27.32■■□□□ 1.96
PCCA-201ENST00000376279 RAPGEF6Q8TEU7 1601 aa27.32■■□□□ 1.96
PCCA-201ENST00000376279 TONSLQ96HA7 1378 aa27.32■■□□□ 1.96
PCCA-201ENST00000376279 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
PCCA-201ENST00000376279 GCC2Q8IWJ2 1684 aa27.27■■□□□ 1.96
PCCA-201ENST00000376279 AKNAQ7Z591 1439 aa27.26■■□□□ 1.95
PCCA-201ENST00000376279 CDK11AQ9UQ88 783 aaPredicted RBP27.24■■□□□ 1.95
PCCA-201ENST00000376279 KDM6BO15054 1643 aa27.23■■□□□ 1.95
PCCA-201ENST00000376279 TRIM52Q96A61 297 aa27.22■■□□□ 1.95
PCCA-201ENST00000376279 HIRIP3Q9BW71 556 aaPredicted RBP27.22■■□□□ 1.95
PCCA-201ENST00000376279 DDX10Q13206 875 aaKnown RBP27.22■■□□□ 1.95
PCCA-201ENST00000376279 PLB1Q6P1J6 1458 aa27.2■■□□□ 1.94
PCCA-201ENST00000376279 NUP160Q12769 1436 aa27.2■■□□□ 1.94
PCCA-201ENST00000376279 JPH4Q96JJ6 628 aa27.19■■□□□ 1.94
PCCA-201ENST00000376279 ZNF644Q9H582 1327 aaPredicted RBP27.18■■□□□ 1.94
PCCA-201ENST00000376279 DAPK1P53355 1430 aa27.18■■□□□ 1.94
PCCA-201ENST00000376279 DENND4BO75064 1496 aaPredicted RBP27.17■■□□□ 1.94
PCCA-201ENST00000376279 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
PCCA-201ENST00000376279 CARMIL2Q6F5E8 1435 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms