RNA–Protein interactions for RNA: ENST00000375859.3

SPIN1-201, Transcript of spindlin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN1, Length 4,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-201ENST00000375859 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
SPIN1-201ENST00000375859 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
SPIN1-201ENST00000375859 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
SPIN1-201ENST00000375859 CHMP7Q8WUX9 453 aaPredicted RBP18.62■□□□□ 0.57
SPIN1-201ENST00000375859 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
SPIN1-201ENST00000375859 ZNF608Q9ULD9 1512 aaPredicted RBP18.6■□□□□ 0.57
SPIN1-201ENST00000375859 CUL7Q14999 1698 aa18.56■□□□□ 0.56
SPIN1-201ENST00000375859 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
SPIN1-201ENST00000375859 MTUS2Q5JR59 1369 aa18.53■□□□□ 0.56
SPIN1-201ENST00000375859 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
SPIN1-201ENST00000375859 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
SPIN1-201ENST00000375859 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
SPIN1-201ENST00000375859 TARBP1Q13395 1621 aaKnown RBP18.5■□□□□ 0.55
SPIN1-201ENST00000375859 FMN1Q68DA7 1419 aa18.48■□□□□ 0.55
SPIN1-201ENST00000375859 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
SPIN1-201ENST00000375859 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
SPIN1-201ENST00000375859 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
SPIN1-201ENST00000375859 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
SPIN1-201ENST00000375859 TIAM1Q13009 1591 aa18.44■□□□□ 0.54
SPIN1-201ENST00000375859 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
SPIN1-201ENST00000375859 EFCAB5A4FU69 1503 aa18.42■□□□□ 0.54
SPIN1-201ENST00000375859 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
SPIN1-201ENST00000375859 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
SPIN1-201ENST00000375859 WDR62O43379 1518 aa18.4■□□□□ 0.54
SPIN1-201ENST00000375859 RRBP1Q9P2E9 1410 aaKnown RBP18.39■□□□□ 0.53
SPIN1-201ENST00000375859 FYCO1Q9BQS8 1478 aa18.37■□□□□ 0.53
SPIN1-201ENST00000375859 PBRM1Q86U86 1689 aa18.37■□□□□ 0.53
SPIN1-201ENST00000375859 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
SPIN1-201ENST00000375859 NEUROD1Q13562 356 aa18.35■□□□□ 0.53
SPIN1-201ENST00000375859 DIEXFQ68CQ4 756 aaKnown RBP18.35■□□□□ 0.53
SPIN1-201ENST00000375859 ADAMTS12P58397 1594 aa18.33■□□□□ 0.53
SPIN1-201ENST00000375859 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
SPIN1-201ENST00000375859 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
SPIN1-201ENST00000375859 EIF4G3O43432 1585 aaKnown RBP18.31■□□□□ 0.52
SPIN1-201ENST00000375859 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
SPIN1-201ENST00000375859 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
SPIN1-201ENST00000375859 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
SPIN1-201ENST00000375859 GRIN2AQ12879 1464 aa18.28■□□□□ 0.52
SPIN1-201ENST00000375859 MAP3K1Q13233 1512 aa18.27■□□□□ 0.52
SPIN1-201ENST00000375859 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.52
SPIN1-201ENST00000375859 ZNF777Q9ULD5 760 aaPredicted RBP18.27■□□□□ 0.52
SPIN1-201ENST00000375859 CDK11AQ9UQ88 783 aaPredicted RBP18.25■□□□□ 0.51
SPIN1-201ENST00000375859 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
SPIN1-201ENST00000375859 THOC2Q8NI27 1593 aaKnown RBP18.24■□□□□ 0.51
SPIN1-201ENST00000375859 SETD5Q9C0A6 1442 aa18.24■□□□□ 0.51
SPIN1-201ENST00000375859 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
SPIN1-201ENST00000375859 SAMD9Q5K651 1589 aa18.22■□□□□ 0.51
SPIN1-201ENST00000375859 CDK13Q14004 1512 aaKnown RBP18.22■□□□□ 0.51
SPIN1-201ENST00000375859 SIN3AQ96ST3 1273 aa18.22■□□□□ 0.51
SPIN1-201ENST00000375859 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
SPIN1-201ENST00000375859 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
SPIN1-201ENST00000375859 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
SPIN1-201ENST00000375859 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
SPIN1-201ENST00000375859 CFAP43Q8NDM7 1665 aa18.19■□□□□ 0.5
SPIN1-201ENST00000375859 CARMIL2Q6F5E8 1435 aa18.17■□□□□ 0.5
SPIN1-201ENST00000375859 EPRSP07814 1512 aaKnown RBP18.16■□□□□ 0.5
SPIN1-201ENST00000375859 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
SPIN1-201ENST00000375859 CCDC18Q5T9S5 1454 aa18.13■□□□□ 0.49
SPIN1-201ENST00000375859 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
SPIN1-201ENST00000375859 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
SPIN1-201ENST00000375859 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
SPIN1-201ENST00000375859 DISP1Q96F81 1524 aa18.12■□□□□ 0.49
SPIN1-201ENST00000375859 PLEKHD1A6NEE1 506 aa18.12■□□□□ 0.49
SPIN1-201ENST00000375859 PLB1Q6P1J6 1458 aa18.11■□□□□ 0.49
SPIN1-201ENST00000375859 HECW1Q76N89 1606 aa18.11■□□□□ 0.49
SPIN1-201ENST00000375859 UGGT2Q9NYU1 1516 aa18.11■□□□□ 0.49
SPIN1-201ENST00000375859 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
SPIN1-201ENST00000375859 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
SPIN1-201ENST00000375859 EHBP1L1Q8N3D4 1523 aa18.09■□□□□ 0.49
SPIN1-201ENST00000375859 MAGI3Q5TCQ9 1506 aa18.08■□□□□ 0.48
SPIN1-201ENST00000375859 KIAA0556O60303 1618 aa18.07■□□□□ 0.48
SPIN1-201ENST00000375859 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
SPIN1-201ENST00000375859 SUPT6HQ7KZ85 1726 aaKnown RBP18.06■□□□□ 0.48
SPIN1-201ENST00000375859 PTPRKQ15262 1439 aa18.05■□□□□ 0.48
SPIN1-201ENST00000375859 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
SPIN1-201ENST00000375859 LRRIQ1Q96JM4 1722 aa18.04■□□□□ 0.48
SPIN1-201ENST00000375859 NUP153P49790 1475 aaKnown RBP18.03■□□□□ 0.48
SPIN1-201ENST00000375859 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
SPIN1-201ENST00000375859 PTPRGP23470 1445 aa18.03■□□□□ 0.48
SPIN1-201ENST00000375859 NUP160Q12769 1436 aa18.01■□□□□ 0.47
SPIN1-201ENST00000375859 FOXD1Q16676 465 aa18■□□□□ 0.47
SPIN1-201ENST00000375859 MIER1Q8N108 512 aa18■□□□□ 0.47
SPIN1-201ENST00000375859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.47
SPIN1-201ENST00000375859 RAPGEF6Q8TEU7 1601 aa17.97■□□□□ 0.47
SPIN1-201ENST00000375859 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
SPIN1-201ENST00000375859 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
SPIN1-201ENST00000375859 NAIPQ13075 1403 aa17.93■□□□□ 0.46
SPIN1-201ENST00000375859 TROQ12816 1431 aaPredicted RBP17.93■□□□□ 0.46
SPIN1-201ENST00000375859 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
SPIN1-201ENST00000375859 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
SPIN1-201ENST00000375859 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
SPIN1-201ENST00000375859 HNRNPMP52272 730 aaKnown RBP eCLIP17.9■□□□□ 0.462e-7■■□□□ 14.1
SPIN1-201ENST00000375859 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
SPIN1-201ENST00000375859 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
SPIN1-201ENST00000375859 MIA2Q96PC5 1412 aa17.89■□□□□ 0.45
SPIN1-201ENST00000375859 MPHOSPH9Q99550 1183 aa17.88■□□□□ 0.45
SPIN1-201ENST00000375859 CENPBP07199 599 aaPredicted RBP17.87■□□□□ 0.45
SPIN1-201ENST00000375859 UACAQ9BZF9 1416 aa17.86■□□□□ 0.45
SPIN1-201ENST00000375859 ATP10BO94823 1461 aa17.85■□□□□ 0.45
SPIN1-201ENST00000375859 MYT1LQ9UL68 1186 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms