RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 UBTFP17480 764 aaKnown RBP19.93■□□□□ 0.78
SDHD-201ENST00000375549 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
SDHD-201ENST00000375549 ADAMTS12P58397 1594 aa19.92■□□□□ 0.78
SDHD-201ENST00000375549 FBLN2P98095 1184 aa19.88■□□□□ 0.77
SDHD-201ENST00000375549 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
SDHD-201ENST00000375549 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
SDHD-201ENST00000375549 TNIKQ9UKE5 1360 aa19.82■□□□□ 0.76
SDHD-201ENST00000375549 GRIN2AQ12879 1464 aa19.81■□□□□ 0.76
SDHD-201ENST00000375549 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
SDHD-201ENST00000375549 CHD1O14646 1710 aa19.71■□□□□ 0.75
SDHD-201ENST00000375549 CEP162Q5TB80 1403 aa19.69■□□□□ 0.74
SDHD-201ENST00000375549 CEP170Q5SW79 1584 aa19.68■□□□□ 0.74
SDHD-201ENST00000375549 NUP160Q12769 1436 aa19.68■□□□□ 0.74
SDHD-201ENST00000375549 CTTNBP2Q8WZ74 1663 aa19.67■□□□□ 0.74
SDHD-201ENST00000375549 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
SDHD-201ENST00000375549 CLIP1P30622 1438 aa19.64■□□□□ 0.73
SDHD-201ENST00000375549 IQGAP2Q13576 1575 aa19.62■□□□□ 0.73
SDHD-201ENST00000375549 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
SDHD-201ENST00000375549 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
SDHD-201ENST00000375549 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
SDHD-201ENST00000375549 ARHGAP35Q9NRY4 1499 aa19.54■□□□□ 0.72
SDHD-201ENST00000375549 UGGT2Q9NYU1 1516 aa19.52■□□□□ 0.71
SDHD-201ENST00000375549 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
SDHD-201ENST00000375549 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
SDHD-201ENST00000375549 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
SDHD-201ENST00000375549 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
SDHD-201ENST00000375549 FHOD3Q2V2M9 1422 aa19.47■□□□□ 0.71
SDHD-201ENST00000375549 SAMD9Q5K651 1589 aa19.47■□□□□ 0.71
SDHD-201ENST00000375549 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
SDHD-201ENST00000375549 DISP1Q96F81 1524 aa19.45■□□□□ 0.7
SDHD-201ENST00000375549 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
SDHD-201ENST00000375549 KIAA0556O60303 1618 aa19.43■□□□□ 0.7
SDHD-201ENST00000375549 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
SDHD-201ENST00000375549 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
SDHD-201ENST00000375549 VPS8Q8N3P4 1428 aa19.39■□□□□ 0.69
SDHD-201ENST00000375549 ERCC6L2Q5T890 1561 aa19.35■□□□□ 0.69
SDHD-201ENST00000375549 FMN1Q68DA7 1419 aa19.35■□□□□ 0.69
SDHD-201ENST00000375549 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
SDHD-201ENST00000375549 PTPRGP23470 1445 aa19.3■□□□□ 0.68
SDHD-201ENST00000375549 CASKIN1Q8WXD9 1431 aa19.26■□□□□ 0.67
SDHD-201ENST00000375549 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
SDHD-201ENST00000375549 APLP2Q06481 763 aa19.25■□□□□ 0.67
SDHD-201ENST00000375549 FYCO1Q9BQS8 1478 aa19.23■□□□□ 0.67
SDHD-201ENST00000375549 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
SDHD-201ENST00000375549 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
SDHD-201ENST00000375549 RAPGEF6Q8TEU7 1601 aa19.19■□□□□ 0.66
SDHD-201ENST00000375549 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
SDHD-201ENST00000375549 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
SDHD-201ENST00000375549 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
SDHD-201ENST00000375549 HECW1Q76N89 1606 aa19.17■□□□□ 0.66
SDHD-201ENST00000375549 ABCA8O94911 1581 aa19.17■□□□□ 0.66
SDHD-201ENST00000375549 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.65
SDHD-201ENST00000375549 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
SDHD-201ENST00000375549 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
SDHD-201ENST00000375549 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
SDHD-201ENST00000375549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
SDHD-201ENST00000375549 HNRNPUL2Q1KMD3 747 aaKnown RBP19.12■□□□□ 0.65
SDHD-201ENST00000375549 EPRSP07814 1512 aaKnown RBP19.11■□□□□ 0.65
SDHD-201ENST00000375549 CCDC18Q5T9S5 1454 aa19.1■□□□□ 0.65
SDHD-201ENST00000375549 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
SDHD-201ENST00000375549 CDK13Q14004 1512 aaKnown RBP19.1■□□□□ 0.65
SDHD-201ENST00000375549 ABCC2Q92887 1545 aa19.1■□□□□ 0.65
SDHD-201ENST00000375549 KANK4Q5T7N3 995 aaPredicted RBP19.09■□□□□ 0.65
SDHD-201ENST00000375549 MAP3K1Q13233 1512 aa19.09■□□□□ 0.65
SDHD-201ENST00000375549 UHRF1BP1LA0JNW5 1464 aa19.08■□□□□ 0.64
SDHD-201ENST00000375549 CYB5RLQ6IPT4 315 aa19.08■□□□□ 0.64
SDHD-201ENST00000375549 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
SDHD-201ENST00000375549 ATP10BO94823 1461 aa19.06■□□□□ 0.64
SDHD-201ENST00000375549 CFAP43Q8NDM7 1665 aa19.06■□□□□ 0.64
SDHD-201ENST00000375549 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
SDHD-201ENST00000375549 CDK11AQ9UQ88 783 aaPredicted RBP19.03■□□□□ 0.64
SDHD-201ENST00000375549 ADCY10Q96PN6 1610 aa19.02■□□□□ 0.64
SDHD-201ENST00000375549 MTUS2Q5JR59 1369 aa19.02■□□□□ 0.64
SDHD-201ENST00000375549 KDM5BQ9UGL1 1544 aa18.99■□□□□ 0.63
SDHD-201ENST00000375549 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
SDHD-201ENST00000375549 NPM1P06748 294 aaKnown RBP eCLIP18.99■□□□□ 0.63
SDHD-201ENST00000375549 MAGI3Q5TCQ9 1506 aa18.97■□□□□ 0.63
SDHD-201ENST00000375549 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
SDHD-201ENST00000375549 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
SDHD-201ENST00000375549 TROQ12816 1431 aaPredicted RBP18.93■□□□□ 0.62
SDHD-201ENST00000375549 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
SDHD-201ENST00000375549 NCOA2Q15596 1464 aa18.87■□□□□ 0.61
SDHD-201ENST00000375549 SUPT6HQ7KZ85 1726 aaKnown RBP18.87■□□□□ 0.61
SDHD-201ENST00000375549 ASXL2Q76L83 1435 aa18.86■□□□□ 0.61
SDHD-201ENST00000375549 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
SDHD-201ENST00000375549 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
SDHD-201ENST00000375549 KIF14Q15058 1648 aa18.83■□□□□ 0.6
SDHD-201ENST00000375549 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
SDHD-201ENST00000375549 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
SDHD-201ENST00000375549 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.6
SDHD-201ENST00000375549 MAPKBP1O60336 1514 aa18.77■□□□□ 0.6
SDHD-201ENST00000375549 ABCC10Q5T3U5 1492 aa18.76■□□□□ 0.59
SDHD-201ENST00000375549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.75■□□□□ 0.595e-8■■■■■ 28.6
SDHD-201ENST00000375549 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
SDHD-201ENST00000375549 RRBP1Q9P2E9 1410 aaKnown RBP18.73■□□□□ 0.59
SDHD-201ENST00000375549 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
SDHD-201ENST00000375549 PCGF6Q9BYE7 350 aa18.73■□□□□ 0.59
SDHD-201ENST00000375549 TTC37Q6PGP7 1564 aa18.72■□□□□ 0.59
SDHD-201ENST00000375549 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
SDHD-201ENST00000375549 CFDP1Q9UEE9 299 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms