RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 RUSC2Q8N2Y8 1516 aa26.05■■□□□ 1.76
APOA1-205ENST00000375329 KIAA0586Q9BVV6 1533 aa26.04■■□□□ 1.76
APOA1-205ENST00000375329 PRG4Q92954 1404 aaPredicted RBP26.02■■□□□ 1.76
APOA1-205ENST00000375329 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
APOA1-205ENST00000375329 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
APOA1-205ENST00000375329 IQGAP2Q13576 1575 aa25.86■■□□□ 1.73
APOA1-205ENST00000375329 CARMIL2Q6F5E8 1435 aa25.83■■□□□ 1.73
APOA1-205ENST00000375329 EEA1Q15075 1411 aa25.81■■□□□ 1.72
APOA1-205ENST00000375329 PRXQ9BXM0 1461 aa25.79■■□□□ 1.72
APOA1-205ENST00000375329 CSRNP3Q8WYN3 585 aa25.78■■□□□ 1.72
APOA1-205ENST00000375329 TNIKQ9UKE5 1360 aa25.72■■□□□ 1.71
APOA1-205ENST00000375329 NPM1P06748 294 aaKnown RBP eCLIP25.72■■□□□ 1.71
APOA1-205ENST00000375329 PTPRGP23470 1445 aa25.71■■□□□ 1.71
APOA1-205ENST00000375329 CTTNBP2Q8WZ74 1663 aa25.71■■□□□ 1.71
APOA1-205ENST00000375329 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
APOA1-205ENST00000375329 UGGT2Q9NYU1 1516 aa25.71■■□□□ 1.71
APOA1-205ENST00000375329 DISP1Q96F81 1524 aa25.64■■□□□ 1.7
APOA1-205ENST00000375329 GOLGA3Q08378 1498 aa25.62■■□□□ 1.69
APOA1-205ENST00000375329 TTBK1Q5TCY1 1321 aaPredicted RBP25.62■■□□□ 1.69
APOA1-205ENST00000375329 ADCY10Q96PN6 1610 aa25.6■■□□□ 1.69
APOA1-205ENST00000375329 FAM9AQ8IZU1 332 aaPredicted RBP25.59■■□□□ 1.69
APOA1-205ENST00000375329 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
APOA1-205ENST00000375329 AEBP2Q6ZN18 517 aaPredicted RBP25.58■■□□□ 1.69
APOA1-205ENST00000375329 MAPKBP1O60336 1514 aa25.53■■□□□ 1.68
APOA1-205ENST00000375329 KIF13AQ9H1H9 1805 aa25.53■■□□□ 1.68
APOA1-205ENST00000375329 UACAQ9BZF9 1416 aa25.53■■□□□ 1.68
APOA1-205ENST00000375329 UHRF1BP1LA0JNW5 1464 aa25.52■■□□□ 1.68
APOA1-205ENST00000375329 KIF21BO75037 1637 aa25.49■■□□□ 1.67
APOA1-205ENST00000375329 ABCC2Q92887 1545 aa25.49■■□□□ 1.67
APOA1-205ENST00000375329 ABCC10Q5T3U5 1492 aa25.44■■□□□ 1.66
APOA1-205ENST00000375329 FAM69CQ0P6D2 419 aa25.42■■□□□ 1.66
APOA1-205ENST00000375329 PLB1Q6P1J6 1458 aa25.38■■□□□ 1.65
APOA1-205ENST00000375329 KDM5BQ9UGL1 1544 aa25.37■■□□□ 1.65
APOA1-205ENST00000375329 DIP2BQ9P265 1576 aa25.35■■□□□ 1.65
APOA1-205ENST00000375329 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
APOA1-205ENST00000375329 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
APOA1-205ENST00000375329 UBTFP17480 764 aaKnown RBP25.33■■□□□ 1.65
APOA1-205ENST00000375329 ASXL2Q76L83 1435 aa25.33■■□□□ 1.65
APOA1-205ENST00000375329 ABCA8O94911 1581 aa25.31■■□□□ 1.64
APOA1-205ENST00000375329 ZCCHC11Q5TAX3 1644 aaKnown RBP25.3■■□□□ 1.64
APOA1-205ENST00000375329 RANGAP1P46060 587 aaPredicted RBP25.28■■□□□ 1.64
APOA1-205ENST00000375329 EFCAB5A4FU69 1503 aa25.26■■□□□ 1.63
APOA1-205ENST00000375329 TSPOAP1O95153 1857 aa25.26■■□□□ 1.63
APOA1-205ENST00000375329 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
APOA1-205ENST00000375329 GLI2P10070 1586 aa25.22■■□□□ 1.63
APOA1-205ENST00000375329 WDR7Q9Y4E6 1490 aa25.19■■□□□ 1.62
APOA1-205ENST00000375329 EPRSP07814 1512 aaKnown RBP25.18■■□□□ 1.62
APOA1-205ENST00000375329 FHOD3Q2V2M9 1422 aa25.18■■□□□ 1.62
APOA1-205ENST00000375329 RAPGEF6Q8TEU7 1601 aa25.17■■□□□ 1.62
APOA1-205ENST00000375329 ATP10BO94823 1461 aa25.12■■□□□ 1.61
APOA1-205ENST00000375329 KDM6BO15054 1643 aa25.12■■□□□ 1.61
APOA1-205ENST00000375329 ARID3CA6NKF2 412 aa25.08■■□□□ 1.61
APOA1-205ENST00000375329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.08■■□□□ 1.61
APOA1-205ENST00000375329 HNRNPUL2Q1KMD3 747 aaKnown RBP25.08■■□□□ 1.61
APOA1-205ENST00000375329 KCNH8Q96L42 1107 aa25.08■■□□□ 1.61
APOA1-205ENST00000375329 MAP3K4Q9Y6R4 1608 aa25.07■■□□□ 1.6
APOA1-205ENST00000375329 TEX14Q8IWB6 1497 aa25.06■■□□□ 1.6
APOA1-205ENST00000375329 FMN1Q68DA7 1419 aa25.05■■□□□ 1.6
APOA1-205ENST00000375329 NUP153P49790 1475 aaKnown RBP25.04■■□□□ 1.6
APOA1-205ENST00000375329 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
APOA1-205ENST00000375329 PPRC1Q5VV67 1664 aaKnown RBP25.02■■□□□ 1.6
APOA1-205ENST00000375329 CFAP43Q8NDM7 1665 aa25.02■■□□□ 1.6
APOA1-205ENST00000375329 CD109Q6YHK3 1445 aa25■■□□□ 1.59
APOA1-205ENST00000375329 PLEKHD1A6NEE1 506 aa24.98■■□□□ 1.59
APOA1-205ENST00000375329 MAGI3Q5TCQ9 1506 aa24.95■■□□□ 1.58
APOA1-205ENST00000375329 ATP1B4Q9UN42 357 aaPredicted RBP24.92■■□□□ 1.58
APOA1-205ENST00000375329 HECW1Q76N89 1606 aa24.92■■□□□ 1.58
APOA1-205ENST00000375329 ABCA9Q8IUA7 1624 aa24.9■■□□□ 1.58
APOA1-205ENST00000375329 CDK11AQ9UQ88 783 aaPredicted RBP24.89■■□□□ 1.58
APOA1-205ENST00000375329 CLIP1P30622 1438 aa24.87■■□□□ 1.57
APOA1-205ENST00000375329 PHLDB1Q86UU1 1377 aa24.85■■□□□ 1.57
APOA1-205ENST00000375329 CDK13Q14004 1512 aaKnown RBP24.83■■□□□ 1.57
APOA1-205ENST00000375329 CASKIN1Q8WXD9 1431 aa24.79■■□□□ 1.56
APOA1-205ENST00000375329 COL17A1Q9UMD9 1497 aaPredicted RBP24.79■■□□□ 1.56
APOA1-205ENST00000375329 NEO1Q92859 1461 aa24.76■■□□□ 1.55
APOA1-205ENST00000375329 CCDC18Q5T9S5 1454 aa24.75■■□□□ 1.55
APOA1-205ENST00000375329 ARAP3Q8WWN8 1544 aa24.75■■□□□ 1.55
APOA1-205ENST00000375329 FYCO1Q9BQS8 1478 aa24.73■■□□□ 1.55
APOA1-205ENST00000375329 PCF11O94913 1555 aaKnown RBP24.72■■□□□ 1.55
APOA1-205ENST00000375329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.72■■□□□ 1.55
APOA1-205ENST00000375329 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
APOA1-205ENST00000375329 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
APOA1-205ENST00000375329 CFAP74Q9C0B2 1584 aa24.68■■□□□ 1.54
APOA1-205ENST00000375329 LRRIQ1Q96JM4 1722 aa24.67■■□□□ 1.54
APOA1-205ENST00000375329 KDM4FA0A1W2PPD8 638 aa24.67■■□□□ 1.54
APOA1-205ENST00000375329 TTC37Q6PGP7 1564 aa24.67■■□□□ 1.54
APOA1-205ENST00000375329 KIF14Q15058 1648 aa24.66■■□□□ 1.54
APOA1-205ENST00000375329 FANCAO15360 1455 aa24.64■■□□□ 1.54
APOA1-205ENST00000375329 ADGRL1O94910 1474 aa24.64■■□□□ 1.54
APOA1-205ENST00000375329 PLCH2O75038 1416 aa24.63■■□□□ 1.53
APOA1-205ENST00000375329 LOC105371045A0A1W2PR82 267 aa24.63■■□□□ 1.53
APOA1-205ENST00000375329 AKNAQ7Z591 1439 aa24.62■■□□□ 1.53
APOA1-205ENST00000375329 MYO5CQ9NQX4 1742 aa24.61■■□□□ 1.53
APOA1-205ENST00000375329 EFCAB2Q5VUJ9 269 aa24.59■■□□□ 1.53
APOA1-205ENST00000375329 DENND4BO75064 1496 aaPredicted RBP24.58■■□□□ 1.52
APOA1-205ENST00000375329 RAPGEF3O95398 923 aa24.57■■□□□ 1.52
APOA1-205ENST00000375329 HECW2Q9P2P5 1572 aa24.5■■□□□ 1.51
APOA1-205ENST00000375329 ARHGAP5Q13017 1502 aa24.5■■□□□ 1.51
APOA1-205ENST00000375329 RICTORQ6R327 1708 aa24.49■■□□□ 1.51
APOA1-205ENST00000375329 MTUS2Q5JR59 1369 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms