RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
TMEM38B-202ENST00000374692 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
TMEM38B-202ENST00000374692 ZNF777Q9ULD5 760 aaPredicted RBP17.5■□□□□ 0.39
TMEM38B-202ENST00000374692 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
TMEM38B-202ENST00000374692 RRP7BPQ9NSQ0 103 aa17.48■□□□□ 0.39
TMEM38B-202ENST00000374692 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
TMEM38B-202ENST00000374692 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
TMEM38B-202ENST00000374692 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
TMEM38B-202ENST00000374692 TRIM52Q96A61 297 aa17.45■□□□□ 0.38
TMEM38B-202ENST00000374692 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
TMEM38B-202ENST00000374692 PHLDB1Q86UU1 1377 aa17.41■□□□□ 0.38
TMEM38B-202ENST00000374692 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
TMEM38B-202ENST00000374692 MIER1Q8N108 512 aa17.4■□□□□ 0.38
TMEM38B-202ENST00000374692 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
TMEM38B-202ENST00000374692 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
TMEM38B-202ENST00000374692 FOXD1Q16676 465 aa17.34■□□□□ 0.37
TMEM38B-202ENST00000374692 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.37
TMEM38B-202ENST00000374692 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
TMEM38B-202ENST00000374692 DHX57Q6P158 1386 aaKnown RBP17.3■□□□□ 0.36
TMEM38B-202ENST00000374692 KIF21AQ7Z4S6 1674 aa17.3■□□□□ 0.36
TMEM38B-202ENST00000374692 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
TMEM38B-202ENST00000374692 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
TMEM38B-202ENST00000374692 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
TMEM38B-202ENST00000374692 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
TMEM38B-202ENST00000374692 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
TMEM38B-202ENST00000374692 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
TMEM38B-202ENST00000374692 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
TMEM38B-202ENST00000374692 DDX10Q13206 875 aaKnown RBP17.22■□□□□ 0.35
TMEM38B-202ENST00000374692 PCF11O94913 1555 aaKnown RBP17.22■□□□□ 0.35
TMEM38B-202ENST00000374692 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
TMEM38B-202ENST00000374692 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
TMEM38B-202ENST00000374692 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
TMEM38B-202ENST00000374692 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
TMEM38B-202ENST00000374692 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
TMEM38B-202ENST00000374692 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
TMEM38B-202ENST00000374692 SNAPC4Q5SXM2 1469 aa17.15■□□□□ 0.34
TMEM38B-202ENST00000374692 TIAM1Q13009 1591 aa17.15■□□□□ 0.34
TMEM38B-202ENST00000374692 MYT1LQ9UL68 1186 aa17.14■□□□□ 0.34
TMEM38B-202ENST00000374692 SETD5Q9C0A6 1442 aa17.14■□□□□ 0.33
TMEM38B-202ENST00000374692 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
TMEM38B-202ENST00000374692 CDK13Q14004 1512 aaKnown RBP17.12■□□□□ 0.33
TMEM38B-202ENST00000374692 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
TMEM38B-202ENST00000374692 ACIN1Q9UKV3 1341 aaKnown RBP17.11■□□□□ 0.33
TMEM38B-202ENST00000374692 SENP3-EIF4A1A0A087X0R7 540 aa17.1■□□□□ 0.33
TMEM38B-202ENST00000374692 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
TMEM38B-202ENST00000374692 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
TMEM38B-202ENST00000374692 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.33
TMEM38B-202ENST00000374692 CDK11AQ9UQ88 783 aaPredicted RBP17.07■□□□□ 0.32
TMEM38B-202ENST00000374692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
TMEM38B-202ENST00000374692 TONSLQ96HA7 1378 aa17.07■□□□□ 0.32
TMEM38B-202ENST00000374692 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
TMEM38B-202ENST00000374692 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
TMEM38B-202ENST00000374692 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
TMEM38B-202ENST00000374692 PTPRKQ15262 1439 aa17.02■□□□□ 0.32
TMEM38B-202ENST00000374692 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
TMEM38B-202ENST00000374692 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
TMEM38B-202ENST00000374692 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
TMEM38B-202ENST00000374692 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.312e-7■■■■□ 20.8
TMEM38B-202ENST00000374692 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
TMEM38B-202ENST00000374692 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
TMEM38B-202ENST00000374692 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
TMEM38B-202ENST00000374692 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
TMEM38B-202ENST00000374692 CUL7Q14999 1698 aa16.98■□□□□ 0.31
TMEM38B-202ENST00000374692 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
TMEM38B-202ENST00000374692 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
TMEM38B-202ENST00000374692 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
TMEM38B-202ENST00000374692 BCANQ96GW7 911 aa16.93■□□□□ 0.3
TMEM38B-202ENST00000374692 IQGAP2Q13576 1575 aa16.93■□□□□ 0.3
TMEM38B-202ENST00000374692 MPHOSPH9Q99550 1183 aa16.92■□□□□ 0.3
TMEM38B-202ENST00000374692 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
TMEM38B-202ENST00000374692 CCDC18Q5T9S5 1454 aa16.92■□□□□ 0.3
TMEM38B-202ENST00000374692 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
TMEM38B-202ENST00000374692 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
TMEM38B-202ENST00000374692 EPRSP07814 1512 aaKnown RBP16.91■□□□□ 0.3
TMEM38B-202ENST00000374692 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
TMEM38B-202ENST00000374692 MAGI3Q5TCQ9 1506 aa16.9■□□□□ 0.3
TMEM38B-202ENST00000374692 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.29
TMEM38B-202ENST00000374692 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
TMEM38B-202ENST00000374692 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
TMEM38B-202ENST00000374692 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
TMEM38B-202ENST00000374692 EIF4G3O43432 1585 aaKnown RBP16.87■□□□□ 0.29
TMEM38B-202ENST00000374692 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
TMEM38B-202ENST00000374692 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
TMEM38B-202ENST00000374692 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
TMEM38B-202ENST00000374692 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
TMEM38B-202ENST00000374692 PBRM1Q86U86 1689 aa16.84■□□□□ 0.29
TMEM38B-202ENST00000374692 KIAA0586Q9BVV6 1533 aa16.84■□□□□ 0.29
TMEM38B-202ENST00000374692 MAPKBP1O60336 1514 aa16.83■□□□□ 0.29
TMEM38B-202ENST00000374692 PTPRGP23470 1445 aa16.83■□□□□ 0.29
TMEM38B-202ENST00000374692 PKD2Q13563 968 aa16.83■□□□□ 0.28
TMEM38B-202ENST00000374692 WDR97A6NE52 1622 aa16.83■□□□□ 0.28
TMEM38B-202ENST00000374692 NAIPQ13075 1403 aa16.81■□□□□ 0.28
TMEM38B-202ENST00000374692 ANP32CO43423 234 aa16.8■□□□□ 0.28
TMEM38B-202ENST00000374692 WDR62O43379 1518 aa16.79■□□□□ 0.28
TMEM38B-202ENST00000374692 DISP1Q96F81 1524 aa16.79■□□□□ 0.28
TMEM38B-202ENST00000374692 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
TMEM38B-202ENST00000374692 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
TMEM38B-202ENST00000374692 NUP153P49790 1475 aaKnown RBP16.78■□□□□ 0.28
TMEM38B-202ENST00000374692 CFAP43Q8NDM7 1665 aa16.74■□□□□ 0.27
TMEM38B-202ENST00000374692 SAMD9Q5K651 1589 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms