RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 RIMBP3BA6NNM3 1639 aa30.4■■■□□ 2.46
PBX3-202ENST00000373482 RIMBP3Q9UFD9 1639 aa30.4■■■□□ 2.46
PBX3-202ENST00000373482 SHROOM2Q13796 1616 aa30.36■■■□□ 2.45
PBX3-202ENST00000373482 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
PBX3-202ENST00000373482 KIAA0586Q9BVV6 1533 aa30.34■■■□□ 2.45
PBX3-202ENST00000373482 KIF21BO75037 1637 aa30.33■■■□□ 2.45
PBX3-202ENST00000373482 IQGAP2Q13576 1575 aa30.29■■■□□ 2.44
PBX3-202ENST00000373482 JPH4Q96JJ6 628 aa30.21■■■□□ 2.43
PBX3-202ENST00000373482 PRG4Q92954 1404 aaPredicted RBP30.16■■■□□ 2.42
PBX3-202ENST00000373482 ERCC6L2Q5T890 1561 aa30.15■■■□□ 2.42
PBX3-202ENST00000373482 GOLGA3Q08378 1498 aa30.12■■■□□ 2.41
PBX3-202ENST00000373482 ARAP1Q96P48 1450 aa30.1■■■□□ 2.41
PBX3-202ENST00000373482 UGGT2Q9NYU1 1516 aa30.07■■■□□ 2.4
PBX3-202ENST00000373482 CARMIL2Q6F5E8 1435 aa30.05■■■□□ 2.4
PBX3-202ENST00000373482 EHMT2Q96KQ7 1210 aa30.01■■■□□ 2.39
PBX3-202ENST00000373482 CYB5RLQ6IPT4 315 aa30■■■□□ 2.39
PBX3-202ENST00000373482 UBTFP17480 764 aaKnown RBP29.99■■■□□ 2.39
PBX3-202ENST00000373482 KIAA0556O60303 1618 aa29.99■■■□□ 2.39
PBX3-202ENST00000373482 DISP1Q96F81 1524 aa29.96■■■□□ 2.39
PBX3-202ENST00000373482 TNIKQ9UKE5 1360 aa29.89■■■□□ 2.37
PBX3-202ENST00000373482 SAMD9Q5K651 1589 aa29.88■■■□□ 2.37
PBX3-202ENST00000373482 PTPRGP23470 1445 aa29.83■■■□□ 2.37
PBX3-202ENST00000373482 EFCAB5A4FU69 1503 aa29.81■■■□□ 2.36
PBX3-202ENST00000373482 RANGAP1P46060 587 aaPredicted RBP29.81■■■□□ 2.36
PBX3-202ENST00000373482 TTBK1Q5TCY1 1321 aaPredicted RBP29.78■■■□□ 2.36
PBX3-202ENST00000373482 ADCY10Q96PN6 1610 aa29.74■■■□□ 2.35
PBX3-202ENST00000373482 P3H3Q8IVL6 736 aa29.72■■■□□ 2.35
PBX3-202ENST00000373482 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
PBX3-202ENST00000373482 FHOD3Q2V2M9 1422 aa29.63■■■□□ 2.33
PBX3-202ENST00000373482 ABCC2Q92887 1545 aa29.63■■■□□ 2.33
PBX3-202ENST00000373482 ARHGAP35Q9NRY4 1499 aa29.62■■■□□ 2.33
PBX3-202ENST00000373482 UHRF1BP1LA0JNW5 1464 aa29.61■■■□□ 2.33
PBX3-202ENST00000373482 ABCA8O94911 1581 aa29.6■■■□□ 2.33
PBX3-202ENST00000373482 LOC105371045A0A1W2PR82 267 aa29.6■■■□□ 2.33
PBX3-202ENST00000373482 NPM1P06748 294 aaKnown RBP eCLIP29.59■■■□□ 2.33
PBX3-202ENST00000373482 PLB1Q6P1J6 1458 aa29.58■■■□□ 2.33
PBX3-202ENST00000373482 RAPGEF6Q8TEU7 1601 aa29.58■■■□□ 2.33
PBX3-202ENST00000373482 CLIP1P30622 1438 aa29.55■■■□□ 2.32
PBX3-202ENST00000373482 ZCCHC11Q5TAX3 1644 aaKnown RBP29.53■■■□□ 2.32
PBX3-202ENST00000373482 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
PBX3-202ENST00000373482 FMN1Q68DA7 1419 aa29.49■■■□□ 2.31
PBX3-202ENST00000373482 MAPKBP1O60336 1514 aa29.47■■■□□ 2.31
PBX3-202ENST00000373482 KDM5BQ9UGL1 1544 aa29.47■■■□□ 2.31
PBX3-202ENST00000373482 HECW1Q76N89 1606 aa29.4■■■□□ 2.3
PBX3-202ENST00000373482 KIF13AQ9H1H9 1805 aa29.39■■■□□ 2.3
PBX3-202ENST00000373482 NUP153P49790 1475 aaKnown RBP29.36■■■□□ 2.29
PBX3-202ENST00000373482 TRHP20396 242 aaPredicted RBP29.35■■■□□ 2.29
PBX3-202ENST00000373482 PCF11O94913 1555 aaKnown RBP29.33■■■□□ 2.29
PBX3-202ENST00000373482 ASXL2Q76L83 1435 aa29.32■■■□□ 2.28
PBX3-202ENST00000373482 LRRIQ1Q96JM4 1722 aa29.31■■■□□ 2.28
PBX3-202ENST00000373482 ATP10BO94823 1461 aa29.31■■■□□ 2.28
PBX3-202ENST00000373482 ARID3CA6NKF2 412 aa29.29■■■□□ 2.28
PBX3-202ENST00000373482 DIP2BQ9P265 1576 aa29.29■■■□□ 2.28
PBX3-202ENST00000373482 ATP1B4Q9UN42 357 aaPredicted RBP29.28■■■□□ 2.28
PBX3-202ENST00000373482 ABCC10Q5T3U5 1492 aa29.26■■■□□ 2.27
PBX3-202ENST00000373482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.26■■■□□ 2.27
PBX3-202ENST00000373482 HNRNPUL2Q1KMD3 747 aaKnown RBP29.26■■■□□ 2.27
PBX3-202ENST00000373482 CASKIN1Q8WXD9 1431 aa29.26■■■□□ 2.27
PBX3-202ENST00000373482 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
PBX3-202ENST00000373482 WDR7Q9Y4E6 1490 aa29.24■■■□□ 2.27
PBX3-202ENST00000373482 EPRSP07814 1512 aaKnown RBP29.22■■■□□ 2.27
PBX3-202ENST00000373482 CDK13Q14004 1512 aaKnown RBP29.21■■■□□ 2.27
PBX3-202ENST00000373482 TSPOAP1O95153 1857 aa29.19■■■□□ 2.26
PBX3-202ENST00000373482 CCDC18Q5T9S5 1454 aa29.17■■■□□ 2.26
PBX3-202ENST00000373482 GLI2P10070 1586 aa29.17■■■□□ 2.26
PBX3-202ENST00000373482 FAM69CQ0P6D2 419 aa29.16■■■□□ 2.26
PBX3-202ENST00000373482 VPS8Q8N3P4 1428 aa29.12■■■□□ 2.25
PBX3-202ENST00000373482 PLEKHD1A6NEE1 506 aa29.12■■■□□ 2.25
PBX3-202ENST00000373482 CFAP43Q8NDM7 1665 aa29.12■■■□□ 2.25
PBX3-202ENST00000373482 MAP3K4Q9Y6R4 1608 aa29.09■■■□□ 2.25
PBX3-202ENST00000373482 KCNH8Q96L42 1107 aa29.09■■■□□ 2.25
PBX3-202ENST00000373482 CDK11AQ9UQ88 783 aaPredicted RBP29.09■■■□□ 2.25
PBX3-202ENST00000373482 ABCA9Q8IUA7 1624 aa29.04■■■□□ 2.24
PBX3-202ENST00000373482 PPRC1Q5VV67 1664 aaKnown RBP29■■■□□ 2.23
PBX3-202ENST00000373482 KIF14Q15058 1648 aa28.98■■■□□ 2.23
PBX3-202ENST00000373482 TROQ12816 1431 aaPredicted RBP28.96■■■□□ 2.23
PBX3-202ENST00000373482 TIAM1Q13009 1591 aa28.93■■■□□ 2.22
PBX3-202ENST00000373482 MYO5CQ9NQX4 1742 aa28.93■■■□□ 2.22
PBX3-202ENST00000373482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.93■■■□□ 2.22
PBX3-202ENST00000373482 CD109Q6YHK3 1445 aa28.93■■■□□ 2.22
PBX3-202ENST00000373482 MAGI3Q5TCQ9 1506 aa28.92■■■□□ 2.22
PBX3-202ENST00000373482 TTC37Q6PGP7 1564 aa28.91■■■□□ 2.22
PBX3-202ENST00000373482 TEX14Q8IWB6 1497 aa28.91■■■□□ 2.22
PBX3-202ENST00000373482 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
PBX3-202ENST00000373482 EHBP1L1Q8N3D4 1523 aa28.87■■■□□ 2.21
PBX3-202ENST00000373482 MTUS2Q5JR59 1369 aa28.87■■■□□ 2.21
PBX3-202ENST00000373482 APLP2Q06481 763 aa28.84■■■□□ 2.21
PBX3-202ENST00000373482 CFAP74Q9C0B2 1584 aa28.82■■■□□ 2.2
PBX3-202ENST00000373482 SUPT6HQ7KZ85 1726 aaKnown RBP28.82■■■□□ 2.2
PBX3-202ENST00000373482 CDC42BPAQ5VT25 1732 aa28.8■■■□□ 2.2
PBX3-202ENST00000373482 KDM6BO15054 1643 aa28.78■■■□□ 2.2
PBX3-202ENST00000373482 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
PBX3-202ENST00000373482 PREX2Q70Z35 1606 aa28.76■■■□□ 2.19
PBX3-202ENST00000373482 LRRC9Q6ZRR7 1453 aa28.75■■■□□ 2.19
PBX3-202ENST00000373482 ARAP3Q8WWN8 1544 aa28.74■■■□□ 2.19
PBX3-202ENST00000373482 ITSN2Q9NZM3 1697 aa28.73■■■□□ 2.19
PBX3-202ENST00000373482 PLCH2O75038 1416 aa28.71■■■□□ 2.19
PBX3-202ENST00000373482 NEO1Q92859 1461 aa28.71■■■□□ 2.19
PBX3-202ENST00000373482 FANCAO15360 1455 aa28.7■■■□□ 2.18
PBX3-202ENST00000373482 ARHGAP5Q13017 1502 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms