RNA–Protein interactions for RNA: ENST00000372437.6

KCNMA1-207, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-207ENST00000372437 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.6
KCNMA1-207ENST00000372437 PDS5BQ9NTI5 1447 aa11.33□□□□□ -0.6
KCNMA1-207ENST00000372437 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
KCNMA1-207ENST00000372437 MTUS2Q5JR59 1369 aa11.32□□□□□ -0.6
KCNMA1-207ENST00000372437 KCNH8Q96L42 1107 aa11.3□□□□□ -0.6
KCNMA1-207ENST00000372437 RRP7BPQ9NSQ0 103 aa11.28□□□□□ -0.6
KCNMA1-207ENST00000372437 FKBP8Q14318 412 aa11.28□□□□□ -0.6
KCNMA1-207ENST00000372437 SYNJ1O43426 1573 aa11.27□□□□□ -0.6
KCNMA1-207ENST00000372437 FGD5Q6ZNL6 1462 aa11.26□□□□□ -0.61
KCNMA1-207ENST00000372437 HIRIP3Q9BW71 556 aaPredicted RBP11.26□□□□□ -0.61
KCNMA1-207ENST00000372437 CDK11AQ9UQ88 783 aaPredicted RBP11.26□□□□□ -0.61
KCNMA1-207ENST00000372437 FHOD3Q2V2M9 1422 aa11.23□□□□□ -0.61
KCNMA1-207ENST00000372437 CFTRP13569 1480 aa11.22□□□□□ -0.61
KCNMA1-207ENST00000372437 IGF1RP08069 1367 aa11.22□□□□□ -0.61
KCNMA1-207ENST00000372437 VPS8Q8N3P4 1428 aa11.21□□□□□ -0.62
KCNMA1-207ENST00000372437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.2□□□□□ -0.62
KCNMA1-207ENST00000372437 SENP3Q9H4L4 574 aaPredicted RBP11.2□□□□□ -0.62
KCNMA1-207ENST00000372437 AQRO60306 1485 aaKnown RBP eCLIP11.2□□□□□ -0.62
KCNMA1-207ENST00000372437 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
KCNMA1-207ENST00000372437 CUX1P39880 1505 aa11.17□□□□□ -0.62
KCNMA1-207ENST00000372437 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
KCNMA1-207ENST00000372437 PLEKHD1A6NEE1 506 aa11.15□□□□□ -0.62
KCNMA1-207ENST00000372437 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.63
KCNMA1-207ENST00000372437 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
KCNMA1-207ENST00000372437 CFDP1Q9UEE9 299 aaPredicted RBP11.13□□□□□ -0.63
KCNMA1-207ENST00000372437 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
KCNMA1-207ENST00000372437 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
KCNMA1-207ENST00000372437 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
KCNMA1-207ENST00000372437 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
KCNMA1-207ENST00000372437 JPH4Q96JJ6 628 aa11.1□□□□□ -0.63
KCNMA1-207ENST00000372437 TSPY4P0CV99 314 aa11.1□□□□□ -0.63
KCNMA1-207ENST00000372437 TSPY10P0CW01 314 aa11.1□□□□□ -0.63
KCNMA1-207ENST00000372437 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
KCNMA1-207ENST00000372437 POLA1P09884 1462 aaPredicted RBP11.09□□□□□ -0.63
KCNMA1-207ENST00000372437 FOXD1Q16676 465 aa11.08□□□□□ -0.63
KCNMA1-207ENST00000372437 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
KCNMA1-207ENST00000372437 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
KCNMA1-207ENST00000372437 TOPBP1Q92547 1522 aa11.07□□□□□ -0.64
KCNMA1-207ENST00000372437 CHGAP10645 457 aaKnown RBP11.07□□□□□ -0.64
KCNMA1-207ENST00000372437 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
KCNMA1-207ENST00000372437 TONSLQ96HA7 1378 aa11.07□□□□□ -0.64
KCNMA1-207ENST00000372437 PEG3Q9GZU2 1588 aa11.05□□□□□ -0.64
KCNMA1-207ENST00000372437 ARAP1Q96P48 1450 aa11.04□□□□□ -0.64
KCNMA1-207ENST00000372437 TOP2BQ02880 1626 aa11.04□□□□□ -0.64
KCNMA1-207ENST00000372437 RGL3Q3MIN7 710 aa11.03□□□□□ -0.64
KCNMA1-207ENST00000372437 IRX6P78412 446 aaPredicted RBP11□□□□□ -0.65
KCNMA1-207ENST00000372437 SENP3-EIF4A1A0A087X0R7 540 aa11□□□□□ -0.65
KCNMA1-207ENST00000372437 KIF21BO75037 1637 aa11□□□□□ -0.65
KCNMA1-207ENST00000372437 PRXQ9BXM0 1461 aa10.99□□□□□ -0.65
KCNMA1-207ENST00000372437 ANP32CO43423 234 aa10.99□□□□□ -0.65
KCNMA1-207ENST00000372437 DEKP35659 375 aaKnown RBP10.99□□□□□ -0.65
KCNMA1-207ENST00000372437 FMN1Q68DA7 1419 aa10.98□□□□□ -0.65
KCNMA1-207ENST00000372437 MSH5O43196 834 aa10.98□□□□□ -0.65
KCNMA1-207ENST00000372437 NBR1Q14596 966 aa10.98□□□□□ -0.65
KCNMA1-207ENST00000372437 ZNF644Q9H582 1327 aaPredicted RBP10.98□□□□□ -0.65
KCNMA1-207ENST00000372437 ARHGAP35Q9NRY4 1499 aa10.97□□□□□ -0.65
KCNMA1-207ENST00000372437 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
KCNMA1-207ENST00000372437 RAB3GAP2Q9H2M9 1393 aa10.96□□□□□ -0.65
KCNMA1-207ENST00000372437 HNRNPMP52272 730 aaKnown RBP eCLIP10.95□□□□□ -0.66
KCNMA1-207ENST00000372437 ZNF608Q9ULD9 1512 aaPredicted RBP10.95□□□□□ -0.66
KCNMA1-207ENST00000372437 CARMIL2Q6F5E8 1435 aa10.95□□□□□ -0.66
KCNMA1-207ENST00000372437 DHX57Q6P158 1386 aaKnown RBP10.94□□□□□ -0.66
KCNMA1-207ENST00000372437 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
KCNMA1-207ENST00000372437 RTL5Q5HYW3 569 aaPredicted RBP10.94□□□□□ -0.66
KCNMA1-207ENST00000372437 PHLDB1Q86UU1 1377 aa10.93□□□□□ -0.66
KCNMA1-207ENST00000372437 CYB5RLQ6IPT4 315 aa10.93□□□□□ -0.66
KCNMA1-207ENST00000372437 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
KCNMA1-207ENST00000372437 HNRNPUQ00839 825 aaKnown RBP eCLIP10.91□□□□□ -0.66
KCNMA1-207ENST00000372437 FANCIQ9NVI1 1328 aa10.9□□□□□ -0.66
KCNMA1-207ENST00000372437 GRIN2BQ13224 1484 aa10.9□□□□□ -0.67
KCNMA1-207ENST00000372437 SNAPC4Q5SXM2 1469 aa10.89□□□□□ -0.67
KCNMA1-207ENST00000372437 SETD5Q9C0A6 1442 aa10.89□□□□□ -0.67
KCNMA1-207ENST00000372437 PTPRGP23470 1445 aa10.89□□□□□ -0.67
KCNMA1-207ENST00000372437 MLECQ14165 292 aa10.88□□□□□ -0.67
KCNMA1-207ENST00000372437 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
KCNMA1-207ENST00000372437 STAG3Q9UJ98 1225 aa10.87□□□□□ -0.67
KCNMA1-207ENST00000372437 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
KCNMA1-207ENST00000372437 SALL2Q9Y467 1007 aaPredicted RBP10.87□□□□□ -0.67
KCNMA1-207ENST00000372437 ABCA10Q8WWZ4 1543 aa10.86□□□□□ -0.67
KCNMA1-207ENST00000372437 ESF1Q9H501 851 aaKnown RBP10.86□□□□□ -0.67
KCNMA1-207ENST00000372437 PKD2Q13563 968 aa10.86□□□□□ -0.67
KCNMA1-207ENST00000372437 ERICH3Q5RHP9 1530 aa10.85□□□□□ -0.67
KCNMA1-207ENST00000372437 GGT6Q6P531 493 aa10.85□□□□□ -0.67
KCNMA1-207ENST00000372437 FAM9BQ8IZU0 186 aa10.84□□□□□ -0.67
KCNMA1-207ENST00000372437 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
KCNMA1-207ENST00000372437 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-207ENST00000372437 MPHOSPH9Q99550 1183 aa10.83□□□□□ -0.68
KCNMA1-207ENST00000372437 OSCARQ8IYS5 282 aa10.83□□□□□ -0.68
KCNMA1-207ENST00000372437 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-207ENST00000372437 IFT140Q96RY7 1462 aa10.82□□□□□ -0.68
KCNMA1-207ENST00000372437 LRRC9Q6ZRR7 1453 aa10.82□□□□□ -0.68
KCNMA1-207ENST00000372437 CCER2I3L3R5 266 aa10.81□□□□□ -0.68
KCNMA1-207ENST00000372437 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
KCNMA1-207ENST00000372437 ARID4BQ4LE39 1312 aaPredicted RBP10.81□□□□□ -0.68
KCNMA1-207ENST00000372437 PRDM2Q13029 1718 aa10.81□□□□□ -0.68
KCNMA1-207ENST00000372437 EIF4G2P78344 907 aaKnown RBP eCLIP10.81□□□□□ -0.68
KCNMA1-207ENST00000372437 CCDC136Q96JN2 1154 aa10.8□□□□□ -0.68
KCNMA1-207ENST00000372437 PRG4Q92954 1404 aaPredicted RBP10.8□□□□□ -0.68
KCNMA1-207ENST00000372437 NUP155O75694 1391 aa10.8□□□□□ -0.68
KCNMA1-207ENST00000372437 ANP32AP39687 249 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms