RNA–Protein interactions for RNA: ENST00000372437.6

KCNMA1-207, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-207ENST00000372437 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
KCNMA1-207ENST00000372437 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
KCNMA1-207ENST00000372437 SHROOM4Q9ULL8 1493 aa14.08□□□□□ -0.16
KCNMA1-207ENST00000372437 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
KCNMA1-207ENST00000372437 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
KCNMA1-207ENST00000372437 ABCC9O60706 1549 aa13.2□□□□□ -0.3
KCNMA1-207ENST00000372437 HRCP23327 699 aa13.09□□□□□ -0.31
KCNMA1-207ENST00000372437 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
KCNMA1-207ENST00000372437 PCGF6Q9BYE7 350 aa12.97□□□□□ -0.33
KCNMA1-207ENST00000372437 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
KCNMA1-207ENST00000372437 PPARGC1BQ86YN6 1023 aaKnown RBP12.91□□□□□ -0.34
KCNMA1-207ENST00000372437 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
KCNMA1-207ENST00000372437 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.37
KCNMA1-207ENST00000372437 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
KCNMA1-207ENST00000372437 TTBK1Q5TCY1 1321 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-207ENST00000372437 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
KCNMA1-207ENST00000372437 RANGAP1P46060 587 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-207ENST00000372437 SCRIBQ14160 1630 aa12.63□□□□□ -0.39
KCNMA1-207ENST00000372437 CHIC1Q5VXU3 224 aa12.63□□□□□ -0.39
KCNMA1-207ENST00000372437 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
KCNMA1-207ENST00000372437 MYO15BQ96JP2 1530 aa12.44□□□□□ -0.42
KCNMA1-207ENST00000372437 MYT1Q01538 1121 aa12.44□□□□□ -0.42
KCNMA1-207ENST00000372437 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-207ENST00000372437 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
KCNMA1-207ENST00000372437 TRIM26Q12899 539 aaPredicted RBP12.41□□□□□ -0.42
KCNMA1-207ENST00000372437 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
KCNMA1-207ENST00000372437 ATP1B4Q9UN42 357 aaPredicted RBP12.27□□□□□ -0.44
KCNMA1-207ENST00000372437 CECR2Q9BXF3 1484 aa12.24□□□□□ -0.45
KCNMA1-207ENST00000372437 APLP2Q06481 763 aa12.24□□□□□ -0.45
KCNMA1-207ENST00000372437 DCAF1Q9Y4B6 1507 aa12.23□□□□□ -0.45
KCNMA1-207ENST00000372437 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
KCNMA1-207ENST00000372437 RSF1Q96T23 1441 aaPredicted RBP12.21□□□□□ -0.45
KCNMA1-207ENST00000372437 CENPBP07199 599 aaPredicted RBP12.19□□□□□ -0.46
KCNMA1-207ENST00000372437 NACADO15069 1562 aa12.18□□□□□ -0.46
KCNMA1-207ENST00000372437 ACIN1Q9UKV3 1341 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-207ENST00000372437 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
KCNMA1-207ENST00000372437 NEUROD1Q13562 356 aa12.12□□□□□ -0.47
KCNMA1-207ENST00000372437 CCER1Q8TC90 406 aaPredicted RBP12.04□□□□□ -0.48
KCNMA1-207ENST00000372437 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
KCNMA1-207ENST00000372437 ITGAEP38570 1179 aa12.01□□□□□ -0.49
KCNMA1-207ENST00000372437 DIEXFQ68CQ4 756 aaKnown RBP11.99□□□□□ -0.49
KCNMA1-207ENST00000372437 YTHDC1Q96MU7 727 aaKnown RBP11.99□□□□□ -0.49
KCNMA1-207ENST00000372437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.97□□□□□ -0.49
KCNMA1-207ENST00000372437 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-207ENST00000372437 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
KCNMA1-207ENST00000372437 P3H3Q8IVL6 736 aa11.93□□□□□ -0.5
KCNMA1-207ENST00000372437 FBLN2P98095 1184 aa11.9□□□□□ -0.5
KCNMA1-207ENST00000372437 BAZ1AQ9NRL2 1556 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-207ENST00000372437 ARID3CA6NKF2 412 aa11.88□□□□□ -0.51
KCNMA1-207ENST00000372437 WIZO95785 1651 aa11.87□□□□□ -0.51
KCNMA1-207ENST00000372437 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-207ENST00000372437 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
KCNMA1-207ENST00000372437 ABCC8Q09428 1581 aa11.77□□□□□ -0.53
KCNMA1-207ENST00000372437 WRNQ14191 1432 aaPredicted RBP eCLIP11.74□□□□□ -0.53
KCNMA1-207ENST00000372437 SOGA1O94964 1423 aa11.73□□□□□ -0.53
KCNMA1-207ENST00000372437 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-207ENST00000372437 ZNF316A6NFI3 1004 aaPredicted RBP11.69□□□□□ -0.54
KCNMA1-207ENST00000372437 ATAD2BQ9ULI0 1458 aa11.67□□□□□ -0.54
KCNMA1-207ENST00000372437 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
KCNMA1-207ENST00000372437 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
KCNMA1-207ENST00000372437 MIER1Q8N108 512 aa11.61□□□□□ -0.55
KCNMA1-207ENST00000372437 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-207ENST00000372437 BCL11AQ9H165 835 aa11.58□□□□□ -0.55
KCNMA1-207ENST00000372437 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
KCNMA1-207ENST00000372437 RUSC2Q8N2Y8 1516 aa11.57□□□□□ -0.56
KCNMA1-207ENST00000372437 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
KCNMA1-207ENST00000372437 CEP162Q5TB80 1403 aa11.56□□□□□ -0.56
KCNMA1-207ENST00000372437 CLIP1P30622 1438 aa11.54□□□□□ -0.56
KCNMA1-207ENST00000372437 ANP32EQ9BTT0 268 aa11.54□□□□□ -0.56
KCNMA1-207ENST00000372437 CNGB1Q14028 1251 aaPredicted RBP11.52□□□□□ -0.57
KCNMA1-207ENST00000372437 BICRAQ9NZM4 1560 aa11.52□□□□□ -0.57
KCNMA1-207ENST00000372437 TDRD9Q8NDG6 1382 aaKnown RBP11.5□□□□□ -0.57
KCNMA1-207ENST00000372437 CUX2O14529 1486 aa11.5□□□□□ -0.57
KCNMA1-207ENST00000372437 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
KCNMA1-207ENST00000372437 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
KCNMA1-207ENST00000372437 ZNF777Q9ULD5 760 aaPredicted RBP11.49□□□□□ -0.57
KCNMA1-207ENST00000372437 KIF27Q86VH2 1401 aa11.48□□□□□ -0.57
KCNMA1-207ENST00000372437 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
KCNMA1-207ENST00000372437 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
KCNMA1-207ENST00000372437 ERCC6Q03468 1493 aa11.46□□□□□ -0.57
KCNMA1-207ENST00000372437 TRIM52Q96A61 297 aa11.46□□□□□ -0.58
KCNMA1-207ENST00000372437 SUPT16HQ9Y5B9 1047 aaKnown RBP11.45□□□□□ -0.58
KCNMA1-207ENST00000372437 BCANQ96GW7 911 aa11.44□□□□□ -0.58
KCNMA1-207ENST00000372437 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
KCNMA1-207ENST00000372437 CHIC2Q9UKJ5 165 aa11.43□□□□□ -0.58
KCNMA1-207ENST00000372437 TNIKQ9UKE5 1360 aa11.42□□□□□ -0.58
KCNMA1-207ENST00000372437 EEA1Q15075 1411 aa11.41□□□□□ -0.58
KCNMA1-207ENST00000372437 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
KCNMA1-207ENST00000372437 NESP48681 1621 aa11.4□□□□□ -0.58
KCNMA1-207ENST00000372437 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.58
KCNMA1-207ENST00000372437 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
KCNMA1-207ENST00000372437 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.58
KCNMA1-207ENST00000372437 CLSPNQ9HAW4 1339 aa11.39□□□□□ -0.59
KCNMA1-207ENST00000372437 RAPGEF2Q9Y4G8 1499 aa11.37□□□□□ -0.59
KCNMA1-207ENST00000372437 NCAPD3P42695 1498 aa11.37□□□□□ -0.59
KCNMA1-207ENST00000372437 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
KCNMA1-207ENST00000372437 KANK4Q5T7N3 995 aaPredicted RBP11.36□□□□□ -0.59
KCNMA1-207ENST00000372437 ZNF326Q5BKZ1 582 aaKnown RBP11.35□□□□□ -0.59
KCNMA1-207ENST00000372437 FANCD2Q9BXW9 1451 aa11.35□□□□□ -0.59
KCNMA1-207ENST00000372437 NEFLP07196 543 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms