RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 IGF1RP08069 1367 aa26.04■■□□□ 1.76
MMP9-201ENST00000372330 LAMC3Q9Y6N6 1575 aa26.02■■□□□ 1.76
MMP9-201ENST00000372330 NEFLP07196 543 aa26.02■■□□□ 1.76
MMP9-201ENST00000372330 FANCIQ9NVI1 1328 aa26■■□□□ 1.75
MMP9-201ENST00000372330 ARHGAP35Q9NRY4 1499 aa26■■□□□ 1.75
MMP9-201ENST00000372330 DNMBPQ6XZF7 1577 aa25.98■■□□□ 1.75
MMP9-201ENST00000372330 MSH5O43196 834 aa25.97■■□□□ 1.75
MMP9-201ENST00000372330 KANK4Q5T7N3 995 aaPredicted RBP25.96■■□□□ 1.75
MMP9-201ENST00000372330 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
MMP9-201ENST00000372330 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
MMP9-201ENST00000372330 CARMIL1Q5VZK9 1371 aa25.92■■□□□ 1.74
MMP9-201ENST00000372330 RAD54L2Q9Y4B4 1467 aa25.89■■□□□ 1.74
MMP9-201ENST00000372330 POLA1P09884 1462 aaPredicted RBP25.89■■□□□ 1.73
MMP9-201ENST00000372330 RRBP1Q9P2E9 1410 aaKnown RBP25.86■■□□□ 1.73
MMP9-201ENST00000372330 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
MMP9-201ENST00000372330 PDS5BQ9NTI5 1447 aa25.84■■□□□ 1.73
MMP9-201ENST00000372330 ABCA10Q8WWZ4 1543 aa25.81■■□□□ 1.72
MMP9-201ENST00000372330 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
MMP9-201ENST00000372330 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
MMP9-201ENST00000372330 MAP3K1Q13233 1512 aa25.74■■□□□ 1.71
MMP9-201ENST00000372330 CCNB3Q8WWL7 1395 aa25.74■■□□□ 1.71
MMP9-201ENST00000372330 DEKP35659 375 aaKnown RBP25.71■■□□□ 1.71
MMP9-201ENST00000372330 TIAM1Q13009 1591 aa25.7■■□□□ 1.7
MMP9-201ENST00000372330 CDK11AQ9UQ88 783 aaPredicted RBP25.69■■□□□ 1.7
MMP9-201ENST00000372330 ITGAEP38570 1179 aa25.69■■□□□ 1.7
MMP9-201ENST00000372330 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
MMP9-201ENST00000372330 FHAD1B1AJZ9 1412 aa25.66■■□□□ 1.7
MMP9-201ENST00000372330 ERICH6BQ5W0A0 696 aa25.65■■□□□ 1.7
MMP9-201ENST00000372330 CCER2I3L3R5 266 aa25.64■■□□□ 1.69
MMP9-201ENST00000372330 P3H3Q8IVL6 736 aa25.61■■□□□ 1.69
MMP9-201ENST00000372330 LRRC9Q6ZRR7 1453 aa25.61■■□□□ 1.69
MMP9-201ENST00000372330 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
MMP9-201ENST00000372330 CUL7Q14999 1698 aa25.6■■□□□ 1.69
MMP9-201ENST00000372330 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
MMP9-201ENST00000372330 PCF11O94913 1555 aaKnown RBP25.54■■□□□ 1.68
MMP9-201ENST00000372330 EFCAB5A4FU69 1503 aa25.54■■□□□ 1.68
MMP9-201ENST00000372330 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
MMP9-201ENST00000372330 CFAP43Q8NDM7 1665 aa25.52■■□□□ 1.68
MMP9-201ENST00000372330 FHOD3Q2V2M9 1422 aa25.52■■□□□ 1.68
MMP9-201ENST00000372330 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
MMP9-201ENST00000372330 PHLDB1Q86UU1 1377 aa25.49■■□□□ 1.67
MMP9-201ENST00000372330 ANO8Q9HCE9 1232 aaPredicted RBP25.49■■□□□ 1.67
MMP9-201ENST00000372330 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
MMP9-201ENST00000372330 MRC2Q9UBG0 1479 aa25.48■■□□□ 1.67
MMP9-201ENST00000372330 FYCO1Q9BQS8 1478 aa25.47■■□□□ 1.67
MMP9-201ENST00000372330 DDX10Q13206 875 aaKnown RBP25.47■■□□□ 1.67
MMP9-201ENST00000372330 PPP1R15AO75807 674 aaPredicted RBP25.46■■□□□ 1.67
MMP9-201ENST00000372330 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.67
MMP9-201ENST00000372330 TRIM52Q96A61 297 aa25.45■■□□□ 1.66
MMP9-201ENST00000372330 CASKIN1Q8WXD9 1431 aa25.45■■□□□ 1.66
MMP9-201ENST00000372330 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
MMP9-201ENST00000372330 ANP32CO43423 234 aa25.42■■□□□ 1.66
MMP9-201ENST00000372330 ATP1B4Q9UN42 357 aaPredicted RBP25.41■■□□□ 1.66
MMP9-201ENST00000372330 FMN1Q68DA7 1419 aa25.38■■□□□ 1.65
MMP9-201ENST00000372330 SETD5Q9C0A6 1442 aa25.37■■□□□ 1.65
MMP9-201ENST00000372330 FAM50AQ14320 339 aaKnown RBP25.34■■□□□ 1.65
MMP9-201ENST00000372330 TIMELESSQ9UNS1 1208 aa25.33■■□□□ 1.65
MMP9-201ENST00000372330 PBRM1Q86U86 1689 aa25.33■■□□□ 1.65
MMP9-201ENST00000372330 NOP58Q9Y2X3 529 aaKnown RBP25.32■■□□□ 1.64
MMP9-201ENST00000372330 MAPKBP1O60336 1514 aa25.32■■□□□ 1.64
MMP9-201ENST00000372330 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
MMP9-201ENST00000372330 WDR62O43379 1518 aa25.31■■□□□ 1.64
MMP9-201ENST00000372330 PPP4R2Q9NY27 417 aa25.3■■□□□ 1.64
MMP9-201ENST00000372330 SAMD9Q5K651 1589 aa25.3■■□□□ 1.64
MMP9-201ENST00000372330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.29■■□□□ 1.64
MMP9-201ENST00000372330 ERCC6Q03468 1493 aa25.27■■□□□ 1.64
MMP9-201ENST00000372330 SALL2Q9Y467 1007 aaPredicted RBP25.25■■□□□ 1.63
MMP9-201ENST00000372330 ZNF608Q9ULD9 1512 aaPredicted RBP25.24■■□□□ 1.63
MMP9-201ENST00000372330 IFT140Q96RY7 1462 aa25.24■■□□□ 1.63
MMP9-201ENST00000372330 LRRIQ1Q96JM4 1722 aa25.22■■□□□ 1.63
MMP9-201ENST00000372330 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
MMP9-201ENST00000372330 MTUS2Q5JR59 1369 aa25.19■■□□□ 1.62
MMP9-201ENST00000372330 ADAMTS12P58397 1594 aa25.19■■□□□ 1.62
MMP9-201ENST00000372330 UBE2Q2Q8WVN8 375 aa25.19■■□□□ 1.62
MMP9-201ENST00000372330 FGD6Q6ZV73 1430 aa25.19■■□□□ 1.62
MMP9-201ENST00000372330 NBR1Q14596 966 aa25.17■■□□□ 1.62
MMP9-201ENST00000372330 RTL5Q5HYW3 569 aaPredicted RBP25.17■■□□□ 1.62
MMP9-201ENST00000372330 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
MMP9-201ENST00000372330 HNRNPUQ00839 825 aaKnown RBP eCLIP25.11■■□□□ 1.61
MMP9-201ENST00000372330 IRX6P78412 446 aaPredicted RBP25.1■■□□□ 1.61
MMP9-201ENST00000372330 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.61
MMP9-201ENST00000372330 NCOA2Q15596 1464 aa25.08■■□□□ 1.61
MMP9-201ENST00000372330 PAK3O75914 559 aaPredicted RBP25.07■■□□□ 1.6
MMP9-201ENST00000372330 SIN3AQ96ST3 1273 aa25.06■■□□□ 1.6
MMP9-201ENST00000372330 EHBP1L1Q8N3D4 1523 aa25.06■■□□□ 1.6
MMP9-201ENST00000372330 MYOM3Q5VTT5 1437 aa25.06■■□□□ 1.6
MMP9-201ENST00000372330 IQGAP2Q13576 1575 aa25.05■■□□□ 1.6
MMP9-201ENST00000372330 SUPT6HQ7KZ85 1726 aaKnown RBP25.04■■□□□ 1.6
MMP9-201ENST00000372330 IPO9Q96P70 1041 aaKnown RBP25.03■■□□□ 1.6
MMP9-201ENST00000372330 PTPRKQ15262 1439 aa25.02■■□□□ 1.6
MMP9-201ENST00000372330 HFM1A2PYH4 1435 aa25.02■■□□□ 1.6
MMP9-201ENST00000372330 MAGI3Q5TCQ9 1506 aa25.02■■□□□ 1.6
MMP9-201ENST00000372330 CCDC18Q5T9S5 1454 aa25.01■■□□□ 1.59
MMP9-201ENST00000372330 ANP32AP39687 249 aaKnown RBP25.01■■□□□ 1.59
MMP9-201ENST00000372330 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
MMP9-201ENST00000372330 UGGT2Q9NYU1 1516 aa24.98■■□□□ 1.59
MMP9-201ENST00000372330 IL27Q8NEV9 243 aa24.97■■□□□ 1.59
MMP9-201ENST00000372330 ZBTB47Q9UFB7 747 aaPredicted RBP24.97■■□□□ 1.59
MMP9-201ENST00000372330 HECW1Q76N89 1606 aa24.96■■□□□ 1.59
MMP9-201ENST00000372330 PTPN23Q9H3S7 1636 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms