RNA–Protein interactions for RNA: ENST00000371187.7

NFIA-204, Transcript of nuclear factor I A, humanhuman

TSL 1 (best) BASIC

Gene NFIA, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-204ENST00000371187 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
NFIA-204ENST00000371187 EEA1Q15075 1411 aa9.85□□□□□ -0.83
NFIA-204ENST00000371187 KIF27Q86VH2 1401 aa9.83□□□□□ -0.84
NFIA-204ENST00000371187 ADRA2BP18089 450 aa9.82□□□□□ -0.84
NFIA-204ENST00000371187 PPP6R1Q9UPN7 881 aa9.82□□□□□ -0.84
NFIA-204ENST00000371187 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
NFIA-204ENST00000371187 RUSC2Q8N2Y8 1516 aa9.82□□□□□ -0.84
NFIA-204ENST00000371187 EIF4G3O43432 1585 aaKnown RBP9.79□□□□□ -0.84
NFIA-204ENST00000371187 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
NFIA-204ENST00000371187 ERICH6BQ5W0A0 696 aa9.78□□□□□ -0.84
NFIA-204ENST00000371187 MYT1LQ9UL68 1186 aa9.78□□□□□ -0.84
NFIA-204ENST00000371187 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
NFIA-204ENST00000371187 GAPVD1Q14C86 1478 aa9.77□□□□□ -0.84
NFIA-204ENST00000371187 PBRM1Q86U86 1689 aa9.77□□□□□ -0.85
NFIA-204ENST00000371187 SUPT16HQ9Y5B9 1047 aaKnown RBP9.76□□□□□ -0.85
NFIA-204ENST00000371187 ERICH3Q5RHP9 1530 aa9.75□□□□□ -0.85
NFIA-204ENST00000371187 AQRO60306 1485 aaKnown RBP eCLIP9.75□□□□□ -0.851e-7■■□□□ 12.1
NFIA-204ENST00000371187 CUL7Q14999 1698 aa9.74□□□□□ -0.85
NFIA-204ENST00000371187 GRIN2BQ13224 1484 aa9.74□□□□□ -0.85
NFIA-204ENST00000371187 KIF21BO75037 1637 aa9.73□□□□□ -0.85
NFIA-204ENST00000371187 IGF1RP08069 1367 aa9.72□□□□□ -0.85
NFIA-204ENST00000371187 EHMT2Q96KQ7 1210 aa9.72□□□□□ -0.85
NFIA-204ENST00000371187 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
NFIA-204ENST00000371187 ADAMTS12P58397 1594 aa9.71□□□□□ -0.86
NFIA-204ENST00000371187 PRXQ9BXM0 1461 aa9.71□□□□□ -0.86
NFIA-204ENST00000371187 SNAPC4Q5SXM2 1469 aa9.7□□□□□ -0.86
NFIA-204ENST00000371187 GOLGA3Q08378 1498 aa9.69□□□□□ -0.86
NFIA-204ENST00000371187 MAGI1Q96QZ7 1491 aaPredicted RBP9.69□□□□□ -0.86
NFIA-204ENST00000371187 YTHDC1Q96MU7 727 aaKnown RBP9.69□□□□□ -0.86
NFIA-204ENST00000371187 CARMIL1Q5VZK9 1371 aa9.68□□□□□ -0.86
NFIA-204ENST00000371187 RAPGEF2Q9Y4G8 1499 aa9.68□□□□□ -0.86
NFIA-204ENST00000371187 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
NFIA-204ENST00000371187 FHAD1B1AJZ9 1412 aa9.67□□□□□ -0.86
NFIA-204ENST00000371187 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
NFIA-204ENST00000371187 SYNJ2O15056 1496 aa9.64□□□□□ -0.87
NFIA-204ENST00000371187 PODXL2Q9NZ53 605 aa9.62□□□□□ -0.87
NFIA-204ENST00000371187 GRIN2AQ12879 1464 aa9.62□□□□□ -0.87
NFIA-204ENST00000371187 DEKP35659 375 aaKnown RBP9.61□□□□□ -0.87
NFIA-204ENST00000371187 UBTFP17480 764 aaKnown RBP9.6□□□□□ -0.87
NFIA-204ENST00000371187 CTTNBP2Q8WZ74 1663 aa9.6□□□□□ -0.87
NFIA-204ENST00000371187 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
NFIA-204ENST00000371187 ZNF316A6NFI3 1004 aaPredicted RBP9.6□□□□□ -0.87
NFIA-204ENST00000371187 CCDC136Q96JN2 1154 aa9.6□□□□□ -0.87
NFIA-204ENST00000371187 CHD1O14646 1710 aa9.6□□□□□ -0.87
NFIA-204ENST00000371187 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
NFIA-204ENST00000371187 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
NFIA-204ENST00000371187 CHMP7Q8WUX9 453 aaPredicted RBP9.59□□□□□ -0.88
NFIA-204ENST00000371187 FBLN2P98095 1184 aa9.57□□□□□ -0.88
NFIA-204ENST00000371187 CEP170Q5SW79 1584 aa9.57□□□□□ -0.88
NFIA-204ENST00000371187 MIER1Q8N108 512 aa9.56□□□□□ -0.88
NFIA-204ENST00000371187 NUP160Q12769 1436 aa9.55□□□□□ -0.88
NFIA-204ENST00000371187 CEP162Q5TB80 1403 aa9.55□□□□□ -0.88
NFIA-204ENST00000371187 CCER1Q8TC90 406 aaPredicted RBP9.54□□□□□ -0.88
NFIA-204ENST00000371187 IQGAP2Q13576 1575 aa9.54□□□□□ -0.88
NFIA-204ENST00000371187 KIAA0586Q9BVV6 1533 aa9.53□□□□□ -0.88
NFIA-204ENST00000371187 FANCIQ9NVI1 1328 aa9.53□□□□□ -0.88
NFIA-204ENST00000371187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.52□□□□□ -0.88
NFIA-204ENST00000371187 CLIP1P30622 1438 aa9.51□□□□□ -0.89
NFIA-204ENST00000371187 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
NFIA-204ENST00000371187 CLASP1Q7Z460 1538 aa9.5□□□□□ -0.89
NFIA-204ENST00000371187 PIAS4Q8N2W9 510 aaPredicted RBP9.49□□□□□ -0.89
NFIA-204ENST00000371187 UGGT2Q9NYU1 1516 aa9.49□□□□□ -0.89
NFIA-204ENST00000371187 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
NFIA-204ENST00000371187 SAMD9Q5K651 1589 aa9.48□□□□□ -0.89
NFIA-204ENST00000371187 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
NFIA-204ENST00000371187 SHROOM2Q13796 1616 aa9.47□□□□□ -0.89
NFIA-204ENST00000371187 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.46□□□□□ -0.9
NFIA-204ENST00000371187 ARAP1Q96P48 1450 aa9.45□□□□□ -0.9
NFIA-204ENST00000371187 KIAA0556O60303 1618 aa9.45□□□□□ -0.9
NFIA-204ENST00000371187 DISP1Q96F81 1524 aa9.43□□□□□ -0.9
NFIA-204ENST00000371187 FHOD3Q2V2M9 1422 aa9.43□□□□□ -0.9
NFIA-204ENST00000371187 OSCARQ8IYS5 282 aa9.43□□□□□ -0.9
NFIA-204ENST00000371187 CARMIL2Q6F5E8 1435 aa9.42□□□□□ -0.9
NFIA-204ENST00000371187 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
NFIA-204ENST00000371187 VPS8Q8N3P4 1428 aa9.41□□□□□ -0.9
NFIA-204ENST00000371187 PRG4Q92954 1404 aaPredicted RBP9.41□□□□□ -0.9
NFIA-204ENST00000371187 NEFLP07196 543 aa9.41□□□□□ -0.9
NFIA-204ENST00000371187 P3H3Q8IVL6 736 aa9.4□□□□□ -0.9
NFIA-204ENST00000371187 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
NFIA-204ENST00000371187 ERCC6L2Q5T890 1561 aa9.38□□□□□ -0.91
NFIA-204ENST00000371187 PCF11O94913 1555 aaKnown RBP9.38□□□□□ -0.91
NFIA-204ENST00000371187 IL27Q8NEV9 243 aa9.37□□□□□ -0.91
NFIA-204ENST00000371187 FYCO1Q9BQS8 1478 aa9.36□□□□□ -0.91
NFIA-204ENST00000371187 CASKIN1Q8WXD9 1431 aa9.34□□□□□ -0.91
NFIA-204ENST00000371187 GLIPR1L2Q4G1C9 344 aa9.34□□□□□ -0.91
NFIA-204ENST00000371187 HECW1Q76N89 1606 aa9.34□□□□□ -0.91
NFIA-204ENST00000371187 RAPGEF6Q8TEU7 1601 aa9.34□□□□□ -0.91
NFIA-204ENST00000371187 PTPRGP23470 1445 aa9.33□□□□□ -0.92
NFIA-204ENST00000371187 ABCA8O94911 1581 aa9.32□□□□□ -0.92
NFIA-204ENST00000371187 ARHGEF11O15085 1522 aa9.32□□□□□ -0.92
NFIA-204ENST00000371187 CFAP43Q8NDM7 1665 aa9.31□□□□□ -0.92
NFIA-204ENST00000371187 BCANQ96GW7 911 aa9.31□□□□□ -0.92
NFIA-204ENST00000371187 PLB1Q6P1J6 1458 aa9.31□□□□□ -0.92
NFIA-204ENST00000371187 ZMYND15Q9H091 742 aa9.3□□□□□ -0.92
NFIA-204ENST00000371187 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
NFIA-204ENST00000371187 FKBP8Q14318 412 aa9.29□□□□□ -0.92
NFIA-204ENST00000371187 RTN4Q9NQC3 1192 aaKnown RBP9.29□□□□□ -0.92
NFIA-204ENST00000371187 RIMBP3CA6NJZ7 1639 aa9.29□□□□□ -0.92
NFIA-204ENST00000371187 RIMBP3BA6NNM3 1639 aa9.29□□□□□ -0.92
NFIA-204ENST00000371187 RIMBP3Q9UFD9 1639 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms