RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 IGF1RP08069 1367 aa26.4■■□□□ 1.82
SS18L1-202ENST00000370848 JPH4Q96JJ6 628 aa26.39■■□□□ 1.82
SS18L1-202ENST00000370848 KIAA0586Q9BVV6 1533 aa26.37■■□□□ 1.81
SS18L1-202ENST00000370848 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
SS18L1-202ENST00000370848 MAPKBP1O60336 1514 aa26.26■■□□□ 1.79
SS18L1-202ENST00000370848 ADCY10Q96PN6 1610 aa26.22■■□□□ 1.79
SS18L1-202ENST00000370848 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
SS18L1-202ENST00000370848 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
SS18L1-202ENST00000370848 DIP2BQ9P265 1576 aa26.12■■□□□ 1.77
SS18L1-202ENST00000370848 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
SS18L1-202ENST00000370848 CARMIL2Q6F5E8 1435 aa26.03■■□□□ 1.76
SS18L1-202ENST00000370848 NPM1P06748 294 aaKnown RBP eCLIP26.01■■□□□ 1.75
SS18L1-202ENST00000370848 PTPRGP23470 1445 aa26.01■■□□□ 1.75
SS18L1-202ENST00000370848 TNIKQ9UKE5 1360 aa26.01■■□□□ 1.75
SS18L1-202ENST00000370848 DISP1Q96F81 1524 aa25.99■■□□□ 1.75
SS18L1-202ENST00000370848 UGGT2Q9NYU1 1516 aa25.99■■□□□ 1.75
SS18L1-202ENST00000370848 UHRF1BP1LA0JNW5 1464 aa25.99■■□□□ 1.75
SS18L1-202ENST00000370848 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
SS18L1-202ENST00000370848 ABCC2Q92887 1545 aa25.98■■□□□ 1.75
SS18L1-202ENST00000370848 FAM69CQ0P6D2 419 aa25.95■■□□□ 1.74
SS18L1-202ENST00000370848 KIAA0556O60303 1618 aa25.88■■□□□ 1.73
SS18L1-202ENST00000370848 GLI2P10070 1586 aa25.88■■□□□ 1.73
SS18L1-202ENST00000370848 UACAQ9BZF9 1416 aa25.87■■□□□ 1.73
SS18L1-202ENST00000370848 PLB1Q6P1J6 1458 aa25.85■■□□□ 1.73
SS18L1-202ENST00000370848 KDM5BQ9UGL1 1544 aa25.85■■□□□ 1.73
SS18L1-202ENST00000370848 CTTNBP2Q8WZ74 1663 aa25.84■■□□□ 1.73
SS18L1-202ENST00000370848 ASXL2Q76L83 1435 aa25.82■■□□□ 1.72
SS18L1-202ENST00000370848 KDM6BO15054 1643 aa25.82■■□□□ 1.72
SS18L1-202ENST00000370848 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
SS18L1-202ENST00000370848 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
SS18L1-202ENST00000370848 PPRC1Q5VV67 1664 aaKnown RBP25.8■■□□□ 1.72
SS18L1-202ENST00000370848 TSPOAP1O95153 1857 aa25.76■■□□□ 1.71
SS18L1-202ENST00000370848 ZCCHC11Q5TAX3 1644 aaKnown RBP25.74■■□□□ 1.71
SS18L1-202ENST00000370848 MAP3K4Q9Y6R4 1608 aa25.72■■□□□ 1.71
SS18L1-202ENST00000370848 GOLGA3Q08378 1498 aa25.72■■□□□ 1.71
SS18L1-202ENST00000370848 EPRSP07814 1512 aaKnown RBP25.71■■□□□ 1.71
SS18L1-202ENST00000370848 ABCA8O94911 1581 aa25.67■■□□□ 1.7
SS18L1-202ENST00000370848 TTBK1Q5TCY1 1321 aaPredicted RBP25.64■■□□□ 1.7
SS18L1-202ENST00000370848 WDR7Q9Y4E6 1490 aa25.61■■□□□ 1.69
SS18L1-202ENST00000370848 TEX14Q8IWB6 1497 aa25.58■■□□□ 1.69
SS18L1-202ENST00000370848 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
SS18L1-202ENST00000370848 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
SS18L1-202ENST00000370848 SAMD9Q5K651 1589 aa25.52■■□□□ 1.68
SS18L1-202ENST00000370848 CFAP43Q8NDM7 1665 aa25.52■■□□□ 1.68
SS18L1-202ENST00000370848 KDM4FA0A1W2PPD8 638 aa25.5■■□□□ 1.67
SS18L1-202ENST00000370848 MAGI3Q5TCQ9 1506 aa25.5■■□□□ 1.67
SS18L1-202ENST00000370848 EEA1Q15075 1411 aa25.49■■□□□ 1.67
SS18L1-202ENST00000370848 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
SS18L1-202ENST00000370848 CD109Q6YHK3 1445 aa25.38■■□□□ 1.65
SS18L1-202ENST00000370848 ATP10BO94823 1461 aa25.38■■□□□ 1.65
SS18L1-202ENST00000370848 FAM9AQ8IZU1 332 aaPredicted RBP25.35■■□□□ 1.65
SS18L1-202ENST00000370848 ADGRL1O94910 1474 aa25.34■■□□□ 1.65
SS18L1-202ENST00000370848 RAPGEF6Q8TEU7 1601 aa25.34■■□□□ 1.65
SS18L1-202ENST00000370848 ABCA9Q8IUA7 1624 aa25.34■■□□□ 1.65
SS18L1-202ENST00000370848 KIF21BO75037 1637 aa25.31■■□□□ 1.64
SS18L1-202ENST00000370848 ARAP3Q8WWN8 1544 aa25.3■■□□□ 1.64
SS18L1-202ENST00000370848 NUP153P49790 1475 aaKnown RBP25.26■■□□□ 1.63
SS18L1-202ENST00000370848 EFCAB5A4FU69 1503 aa25.25■■□□□ 1.63
SS18L1-202ENST00000370848 PHLDB1Q86UU1 1377 aa25.24■■□□□ 1.63
SS18L1-202ENST00000370848 KCNH8Q96L42 1107 aa25.23■■□□□ 1.63
SS18L1-202ENST00000370848 P3H3Q8IVL6 736 aa25.21■■□□□ 1.63
SS18L1-202ENST00000370848 NEO1Q92859 1461 aa25.18■■□□□ 1.62
SS18L1-202ENST00000370848 FHOD3Q2V2M9 1422 aa25.17■■□□□ 1.62
SS18L1-202ENST00000370848 FRMPD1Q5SYB0 1578 aa25.1■■□□□ 1.61
SS18L1-202ENST00000370848 ARID3CA6NKF2 412 aa25.08■■□□□ 1.61
SS18L1-202ENST00000370848 EHMT2Q96KQ7 1210 aa25.08■■□□□ 1.61
SS18L1-202ENST00000370848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.02■■□□□ 1.6
SS18L1-202ENST00000370848 CFAP74Q9C0B2 1584 aa25.02■■□□□ 1.6
SS18L1-202ENST00000370848 HECW2Q9P2P5 1572 aa25.01■■□□□ 1.59
SS18L1-202ENST00000370848 ADAMTSL3P82987 1691 aa25■■□□□ 1.59
SS18L1-202ENST00000370848 RICTORQ6R327 1708 aa25■■□□□ 1.59
SS18L1-202ENST00000370848 TTC37Q6PGP7 1564 aa24.98■■□□□ 1.59
SS18L1-202ENST00000370848 PLEKHD1A6NEE1 506 aa24.97■■□□□ 1.59
SS18L1-202ENST00000370848 ARHGEF40Q8TER5 1519 aa24.96■■□□□ 1.59
SS18L1-202ENST00000370848 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
SS18L1-202ENST00000370848 FMN1Q68DA7 1419 aa24.95■■□□□ 1.59
SS18L1-202ENST00000370848 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
SS18L1-202ENST00000370848 ZMYM4Q5VZL5 1548 aa24.95■■□□□ 1.58
SS18L1-202ENST00000370848 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
SS18L1-202ENST00000370848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
SS18L1-202ENST00000370848 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
SS18L1-202ENST00000370848 CDK13Q14004 1512 aaKnown RBP24.94■■□□□ 1.58
SS18L1-202ENST00000370848 FANCAO15360 1455 aa24.94■■□□□ 1.58
SS18L1-202ENST00000370848 RAPGEF3O95398 923 aa24.93■■□□□ 1.58
SS18L1-202ENST00000370848 DENND4BO75064 1496 aaPredicted RBP24.92■■□□□ 1.58
SS18L1-202ENST00000370848 AKNAQ7Z591 1439 aa24.92■■□□□ 1.58
SS18L1-202ENST00000370848 BCORL1Q5H9F3 1711 aa24.92■■□□□ 1.58
SS18L1-202ENST00000370848 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
SS18L1-202ENST00000370848 PTPRMP28827 1452 aa24.86■■□□□ 1.57
SS18L1-202ENST00000370848 PLCH2O75038 1416 aa24.86■■□□□ 1.57
SS18L1-202ENST00000370848 MAGI2Q86UL8 1455 aa24.85■■□□□ 1.57
SS18L1-202ENST00000370848 MADDQ8WXG6 1647 aa24.81■■□□□ 1.56
SS18L1-202ENST00000370848 LRRIQ1Q96JM4 1722 aa24.81■■□□□ 1.56
SS18L1-202ENST00000370848 MYO5CQ9NQX4 1742 aa24.81■■□□□ 1.56
SS18L1-202ENST00000370848 POGZQ7Z3K3 1410 aa24.78■■□□□ 1.56
SS18L1-202ENST00000370848 ZFYVE16Q7Z3T8 1539 aa24.78■■□□□ 1.56
SS18L1-202ENST00000370848 KIF14Q15058 1648 aa24.77■■□□□ 1.56
SS18L1-202ENST00000370848 SIGLEC1Q9BZZ2 1709 aa24.77■■□□□ 1.56
SS18L1-202ENST00000370848 TROQ12816 1431 aaPredicted RBP24.77■■□□□ 1.56
SS18L1-202ENST00000370848 YEATS2Q9ULM3 1422 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms