RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 CTTNBP2Q8WZ74 1663 aa40.8■■■■■ 4.12
NSMCE4A-201ENST00000369017 EHMT2Q96KQ7 1210 aa40.76■■■■■ 4.12
NSMCE4A-201ENST00000369017 CLASP1Q7Z460 1538 aa40.72■■■■■ 4.11
NSMCE4A-201ENST00000369017 IQGAP2Q13576 1575 aa40.7■■■■■ 4.11
NSMCE4A-201ENST00000369017 TNIKQ9UKE5 1360 aa40.64■■■■■ 4.1
NSMCE4A-201ENST00000369017 LOC105371045A0A1W2PR82 267 aa40.59■■■■■ 4.09
NSMCE4A-201ENST00000369017 JPH4Q96JJ6 628 aa40.58■■■■■ 4.09
NSMCE4A-201ENST00000369017 SHROOM2Q13796 1616 aa40.52■■■■■ 4.08
NSMCE4A-201ENST00000369017 UGGT2Q9NYU1 1516 aa40.48■■■■■ 4.07
NSMCE4A-201ENST00000369017 CARMIL2Q6F5E8 1435 aa40.45■■■■■ 4.07
NSMCE4A-201ENST00000369017 PRG4Q92954 1404 aaPredicted RBP40.41■■■■■ 4.06
NSMCE4A-201ENST00000369017 EFCAB5A4FU69 1503 aa40.36■■■■■ 4.05
NSMCE4A-201ENST00000369017 RANGAP1P46060 587 aaPredicted RBP40.33■■■■■ 4.05
NSMCE4A-201ENST00000369017 SAMD9Q5K651 1589 aa40.27■■■■■ 4.04
NSMCE4A-201ENST00000369017 DISP1Q96F81 1524 aa40.26■■■■■ 4.04
NSMCE4A-201ENST00000369017 KIAA0556O60303 1618 aa40.26■■■■■ 4.04
NSMCE4A-201ENST00000369017 CLIP1P30622 1438 aa40.25■■■■■ 4.03
NSMCE4A-201ENST00000369017 CEP162Q5TB80 1403 aa40.25■■■■■ 4.03
NSMCE4A-201ENST00000369017 ARHGEF11O15085 1522 aa40.22■■■■■ 4.03
NSMCE4A-201ENST00000369017 DNAJC5Q9H3Z4 198 aa40.2■■■■■ 4.03
NSMCE4A-201ENST00000369017 ARHGAP35Q9NRY4 1499 aa40.14■■■■■ 4.02
NSMCE4A-201ENST00000369017 ERCC6L2Q5T890 1561 aa40.12■■■■■ 4.01
NSMCE4A-201ENST00000369017 RIMBP3CA6NJZ7 1639 aa40.12■■■■■ 4.01
NSMCE4A-201ENST00000369017 RIMBP3BA6NNM3 1639 aa40.12■■■■■ 4.01
NSMCE4A-201ENST00000369017 RIMBP3Q9UFD9 1639 aa40.12■■■■■ 4.01
NSMCE4A-201ENST00000369017 P3H3Q8IVL6 736 aa40.11■■■■■ 4.01
NSMCE4A-201ENST00000369017 PTPRGP23470 1445 aa40.07■■■■■ 4
NSMCE4A-201ENST00000369017 FHOD3Q2V2M9 1422 aa40.02■■■■■ 4
NSMCE4A-201ENST00000369017 FMN1Q68DA7 1419 aa40■■■■□ 3.99
NSMCE4A-201ENST00000369017 TTBK1Q5TCY1 1321 aaPredicted RBP39.94■■■■□ 3.98
NSMCE4A-201ENST00000369017 ARAP1Q96P48 1450 aa39.94■■■■□ 3.98
NSMCE4A-201ENST00000369017 CYB5RLQ6IPT4 315 aa39.84■■■■□ 3.97
NSMCE4A-201ENST00000369017 UACAQ9BZF9 1416 aa39.82■■■■□ 3.97
NSMCE4A-201ENST00000369017 RAPGEF6Q8TEU7 1601 aa39.76■■■■□ 3.95
NSMCE4A-201ENST00000369017 VPS8Q8N3P4 1428 aa39.75■■■■□ 3.95
NSMCE4A-201ENST00000369017 ABCA8O94911 1581 aa39.75■■■■□ 3.95
NSMCE4A-201ENST00000369017 UHRF1BP1LA0JNW5 1464 aa39.75■■■■□ 3.95
NSMCE4A-201ENST00000369017 PLB1Q6P1J6 1458 aa39.74■■■■□ 3.95
NSMCE4A-201ENST00000369017 ABCC2Q92887 1545 aa39.72■■■■□ 3.95
NSMCE4A-201ENST00000369017 CASKIN1Q8WXD9 1431 aa39.7■■■■□ 3.95
NSMCE4A-201ENST00000369017 FYCO1Q9BQS8 1478 aa39.68■■■■□ 3.94
NSMCE4A-201ENST00000369017 HECW1Q76N89 1606 aa39.67■■■■□ 3.94
NSMCE4A-201ENST00000369017 NPM1P06748 294 aaKnown RBP eCLIP39.64■■■■□ 3.94
NSMCE4A-201ENST00000369017 ATP1B4Q9UN42 357 aaPredicted RBP39.64■■■■□ 3.94
NSMCE4A-201ENST00000369017 PCF11O94913 1555 aaKnown RBP39.62■■■■□ 3.93
NSMCE4A-201ENST00000369017 ADCY10Q96PN6 1610 aa39.61■■■■□ 3.93
NSMCE4A-201ENST00000369017 NUP153P49790 1475 aaKnown RBP39.55■■■■□ 3.92
NSMCE4A-201ENST00000369017 CCDC18Q5T9S5 1454 aa39.53■■■■□ 3.92
NSMCE4A-201ENST00000369017 KDM5BQ9UGL1 1544 aa39.52■■■■□ 3.92
NSMCE4A-201ENST00000369017 APLP2Q06481 763 aa39.51■■■■□ 3.92
NSMCE4A-201ENST00000369017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.47■■■■□ 3.91
NSMCE4A-201ENST00000369017 HNRNPUL2Q1KMD3 747 aaKnown RBP39.47■■■■□ 3.91
NSMCE4A-201ENST00000369017 EPRSP07814 1512 aaKnown RBP39.46■■■■□ 3.91
NSMCE4A-201ENST00000369017 CDK11AQ9UQ88 783 aaPredicted RBP39.45■■■■□ 3.91
NSMCE4A-201ENST00000369017 ATP10BO94823 1461 aa39.43■■■■□ 3.9
NSMCE4A-201ENST00000369017 ZCCHC11Q5TAX3 1644 aaKnown RBP39.42■■■■□ 3.9
NSMCE4A-201ENST00000369017 ARID3CA6NKF2 412 aa39.37■■■■□ 3.89
NSMCE4A-201ENST00000369017 MAP3K1Q13233 1512 aa39.36■■■■□ 3.89
NSMCE4A-201ENST00000369017 PLEKHD1A6NEE1 506 aa39.33■■■■□ 3.89
NSMCE4A-201ENST00000369017 CDK13Q14004 1512 aaKnown RBP39.32■■■■□ 3.89
NSMCE4A-201ENST00000369017 LRRIQ1Q96JM4 1722 aa39.31■■■■□ 3.88
NSMCE4A-201ENST00000369017 MAPKBP1O60336 1514 aa39.29■■■■□ 3.88
NSMCE4A-201ENST00000369017 TIAM1Q13009 1591 aa39.27■■■■□ 3.88
NSMCE4A-201ENST00000369017 CFAP43Q8NDM7 1665 aa39.26■■■■□ 3.88
NSMCE4A-201ENST00000369017 ASXL2Q76L83 1435 aa39.22■■■■□ 3.87
NSMCE4A-201ENST00000369017 WDR7Q9Y4E6 1490 aa39.19■■■■□ 3.86
NSMCE4A-201ENST00000369017 MTUS2Q5JR59 1369 aa39.19■■■■□ 3.86
NSMCE4A-201ENST00000369017 TROQ12816 1431 aaPredicted RBP39.14■■■■□ 3.86
NSMCE4A-201ENST00000369017 EHBP1L1Q8N3D4 1523 aa39.11■■■■□ 3.85
NSMCE4A-201ENST00000369017 LRRC9Q6ZRR7 1453 aa39.1■■■■□ 3.85
NSMCE4A-201ENST00000369017 KCNH8Q96L42 1107 aa39.04■■■■□ 3.84
NSMCE4A-201ENST00000369017 KIF14Q15058 1648 aa39.02■■■■□ 3.84
NSMCE4A-201ENST00000369017 MAGI3Q5TCQ9 1506 aa39■■■■□ 3.83
NSMCE4A-201ENST00000369017 ABCC10Q5T3U5 1492 aa38.98■■■■□ 3.83
NSMCE4A-201ENST00000369017 KANK4Q5T7N3 995 aaPredicted RBP38.97■■■■□ 3.83
NSMCE4A-201ENST00000369017 SUPT6HQ7KZ85 1726 aaKnown RBP38.96■■■■□ 3.83
NSMCE4A-201ENST00000369017 GLI2P10070 1586 aa38.92■■■■□ 3.82
NSMCE4A-201ENST00000369017 DIP2BQ9P265 1576 aa38.91■■■■□ 3.82
NSMCE4A-201ENST00000369017 FAM69CQ0P6D2 419 aa38.88■■■■□ 3.81
NSMCE4A-201ENST00000369017 ABCA9Q8IUA7 1624 aa38.86■■■■□ 3.81
NSMCE4A-201ENST00000369017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.84■■■■□ 3.81
NSMCE4A-201ENST00000369017 NCOA2Q15596 1464 aa38.82■■■■□ 3.81
NSMCE4A-201ENST00000369017 TRHP20396 242 aaPredicted RBP38.82■■■■□ 3.8
NSMCE4A-201ENST00000369017 CCNB3Q8WWL7 1395 aa38.8■■■■□ 3.8
NSMCE4A-201ENST00000369017 KIF13AQ9H1H9 1805 aa38.77■■■■□ 3.8
NSMCE4A-201ENST00000369017 CD109Q6YHK3 1445 aa38.76■■■■□ 3.8
NSMCE4A-201ENST00000369017 TTC37Q6PGP7 1564 aa38.75■■■■□ 3.79
NSMCE4A-201ENST00000369017 MAP3K4Q9Y6R4 1608 aa38.74■■■■□ 3.79
NSMCE4A-201ENST00000369017 MYO5CQ9NQX4 1742 aa38.73■■■■□ 3.79
NSMCE4A-201ENST00000369017 ITSN2Q9NZM3 1697 aa38.72■■■■□ 3.79
NSMCE4A-201ENST00000369017 PPARGC1BQ86YN6 1023 aaKnown RBP38.72■■■■□ 3.79
NSMCE4A-201ENST00000369017 ARAP3Q8WWN8 1544 aa38.68■■■■□ 3.78
NSMCE4A-201ENST00000369017 PLCH2O75038 1416 aa38.68■■■■□ 3.78
NSMCE4A-201ENST00000369017 GPATCH8Q9UKJ3 1502 aaKnown RBP38.65■■■■□ 3.78
NSMCE4A-201ENST00000369017 PREX2Q70Z35 1606 aa38.64■■■■□ 3.78
NSMCE4A-201ENST00000369017 MYOM3Q5VTT5 1437 aa38.63■■■■□ 3.78
NSMCE4A-201ENST00000369017 CDC42BPAQ5VT25 1732 aa38.63■■■■□ 3.78
NSMCE4A-201ENST00000369017 TEX14Q8IWB6 1497 aa38.63■■■■□ 3.77
NSMCE4A-201ENST00000369017 CFDP1Q9UEE9 299 aaPredicted RBP38.62■■■■□ 3.77
NSMCE4A-201ENST00000369017 EFCAB2Q5VUJ9 269 aa38.61■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms