RNA–Protein interactions for RNA: ENST00000368926.5

C1orf56-201, Transcript of chromosome 1 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf56, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-201ENST00000368926 KIF21BO75037 1637 aa26.61■■□□□ 1.85
C1orf56-201ENST00000368926 SCAF1Q9H7N4 1312 aaKnown RBP26.57■■□□□ 1.84
C1orf56-201ENST00000368926 CEP170Q5SW79 1584 aa26.56■■□□□ 1.84
C1orf56-201ENST00000368926 NUP160Q12769 1436 aa26.55■■□□□ 1.84
C1orf56-201ENST00000368926 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
C1orf56-201ENST00000368926 EHMT2Q96KQ7 1210 aa26.51■■□□□ 1.83
C1orf56-201ENST00000368926 GOLGA3Q08378 1498 aa26.48■■□□□ 1.83
C1orf56-201ENST00000368926 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
C1orf56-201ENST00000368926 KIAA0586Q9BVV6 1533 aa26.41■■□□□ 1.82
C1orf56-201ENST00000368926 CTTNBP2Q8WZ74 1663 aa26.4■■□□□ 1.82
C1orf56-201ENST00000368926 CCER1Q8TC90 406 aaPredicted RBP26.37■■□□□ 1.81
C1orf56-201ENST00000368926 IQGAP2Q13576 1575 aa26.35■■□□□ 1.81
C1orf56-201ENST00000368926 UBTFP17480 764 aaKnown RBP26.34■■□□□ 1.81
C1orf56-201ENST00000368926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.31■■□□□ 1.8
C1orf56-201ENST00000368926 SHROOM2Q13796 1616 aa26.31■■□□□ 1.8
C1orf56-201ENST00000368926 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
C1orf56-201ENST00000368926 ACIN1Q9UKV3 1341 aaKnown RBP26.26■■□□□ 1.8
C1orf56-201ENST00000368926 TNIKQ9UKE5 1360 aa26.24■■□□□ 1.79
C1orf56-201ENST00000368926 UGGT2Q9NYU1 1516 aa26.23■■□□□ 1.79
C1orf56-201ENST00000368926 PRG4Q92954 1404 aaPredicted RBP26.19■■□□□ 1.78
C1orf56-201ENST00000368926 CEP162Q5TB80 1403 aa26.17■■□□□ 1.78
C1orf56-201ENST00000368926 ERCC6L2Q5T890 1561 aa26.17■■□□□ 1.78
C1orf56-201ENST00000368926 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
C1orf56-201ENST00000368926 DISP1Q96F81 1524 aa26.15■■□□□ 1.78
C1orf56-201ENST00000368926 ARHGEF11O15085 1522 aa26.13■■□□□ 1.77
C1orf56-201ENST00000368926 CENPBP07199 599 aaPredicted RBP26.13■■□□□ 1.77
C1orf56-201ENST00000368926 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
C1orf56-201ENST00000368926 DIEXFQ68CQ4 756 aaKnown RBP26.13■■□□□ 1.77
C1orf56-201ENST00000368926 SAMD9Q5K651 1589 aa26.11■■□□□ 1.77
C1orf56-201ENST00000368926 KIAA0556O60303 1618 aa26.1■■□□□ 1.77
C1orf56-201ENST00000368926 RIMBP3CA6NJZ7 1639 aa26.09■■□□□ 1.77
C1orf56-201ENST00000368926 RIMBP3BA6NNM3 1639 aa26.09■■□□□ 1.77
C1orf56-201ENST00000368926 RIMBP3Q9UFD9 1639 aa26.09■■□□□ 1.77
C1orf56-201ENST00000368926 NEUROD1Q13562 356 aa26.08■■□□□ 1.77
C1orf56-201ENST00000368926 CARMIL2Q6F5E8 1435 aa26.08■■□□□ 1.77
C1orf56-201ENST00000368926 EFCAB5A4FU69 1503 aa26.06■■□□□ 1.76
C1orf56-201ENST00000368926 ARHGAP35Q9NRY4 1499 aa26.03■■□□□ 1.76
C1orf56-201ENST00000368926 CLIP1P30622 1438 aa26.02■■□□□ 1.76
C1orf56-201ENST00000368926 P3H3Q8IVL6 736 aa26■■□□□ 1.75
C1orf56-201ENST00000368926 ARAP1Q96P48 1450 aa25.98■■□□□ 1.75
C1orf56-201ENST00000368926 FHOD3Q2V2M9 1422 aa25.96■■□□□ 1.75
C1orf56-201ENST00000368926 PTPRGP23470 1445 aa25.92■■□□□ 1.74
C1orf56-201ENST00000368926 GTF3C3Q9Y5Q9 886 aa25.89■■□□□ 1.74
C1orf56-201ENST00000368926 TTBK1Q5TCY1 1321 aaPredicted RBP25.89■■□□□ 1.74
C1orf56-201ENST00000368926 ZNF316A6NFI3 1004 aaPredicted RBP25.86■■□□□ 1.73
C1orf56-201ENST00000368926 CYB5RLQ6IPT4 315 aa25.84■■□□□ 1.73
C1orf56-201ENST00000368926 PLB1Q6P1J6 1458 aa25.8■■□□□ 1.72
C1orf56-201ENST00000368926 FMN1Q68DA7 1419 aa25.79■■□□□ 1.72
C1orf56-201ENST00000368926 ABCA8O94911 1581 aa25.79■■□□□ 1.72
C1orf56-201ENST00000368926 UACAQ9BZF9 1416 aa25.77■■□□□ 1.72
C1orf56-201ENST00000368926 MYT1Q01538 1121 aa25.75■■□□□ 1.71
C1orf56-201ENST00000368926 ADCY10Q96PN6 1610 aa25.75■■□□□ 1.71
C1orf56-201ENST00000368926 RAPGEF6Q8TEU7 1601 aa25.74■■□□□ 1.71
C1orf56-201ENST00000368926 UHRF1BP1LA0JNW5 1464 aa25.73■■□□□ 1.71
C1orf56-201ENST00000368926 ABCC2Q92887 1545 aa25.73■■□□□ 1.71
C1orf56-201ENST00000368926 PCF11O94913 1555 aaKnown RBP25.7■■□□□ 1.7
C1orf56-201ENST00000368926 VPS8Q8N3P4 1428 aa25.68■■□□□ 1.7
C1orf56-201ENST00000368926 CASKIN1Q8WXD9 1431 aa25.67■■□□□ 1.7
C1orf56-201ENST00000368926 NUP153P49790 1475 aaKnown RBP25.66■■□□□ 1.7
C1orf56-201ENST00000368926 HECW1Q76N89 1606 aa25.63■■□□□ 1.69
C1orf56-201ENST00000368926 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
C1orf56-201ENST00000368926 KDM5BQ9UGL1 1544 aa25.61■■□□□ 1.69
C1orf56-201ENST00000368926 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
C1orf56-201ENST00000368926 LRRIQ1Q96JM4 1722 aa25.58■■□□□ 1.69
C1orf56-201ENST00000368926 ZCCHC11Q5TAX3 1644 aaKnown RBP25.58■■□□□ 1.69
C1orf56-201ENST00000368926 ATP10BO94823 1461 aa25.57■■□□□ 1.68
C1orf56-201ENST00000368926 ARID3CA6NKF2 412 aa25.57■■□□□ 1.68
C1orf56-201ENST00000368926 EPRSP07814 1512 aaKnown RBP25.56■■□□□ 1.68
C1orf56-201ENST00000368926 CDK13Q14004 1512 aaKnown RBP25.54■■□□□ 1.68
C1orf56-201ENST00000368926 NPM1P06748 294 aaKnown RBP eCLIP25.52■■□□□ 1.68
C1orf56-201ENST00000368926 CCDC18Q5T9S5 1454 aa25.49■■□□□ 1.67
C1orf56-201ENST00000368926 HNRNPUL2Q1KMD3 747 aaKnown RBP25.48■■□□□ 1.67
C1orf56-201ENST00000368926 MAPKBP1O60336 1514 aa25.46■■□□□ 1.67
C1orf56-201ENST00000368926 APLP2Q06481 763 aa25.45■■□□□ 1.66
C1orf56-201ENST00000368926 MIER1Q8N108 512 aa25.44■■□□□ 1.66
C1orf56-201ENST00000368926 ASXL2Q76L83 1435 aa25.43■■□□□ 1.66
C1orf56-201ENST00000368926 CFAP43Q8NDM7 1665 aa25.42■■□□□ 1.66
C1orf56-201ENST00000368926 YTHDC1Q96MU7 727 aaKnown RBP25.41■■□□□ 1.66
C1orf56-201ENST00000368926 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
C1orf56-201ENST00000368926 MAP3K1Q13233 1512 aa25.39■■□□□ 1.66
C1orf56-201ENST00000368926 CLSPNQ9HAW4 1339 aa25.39■■□□□ 1.65
C1orf56-201ENST00000368926 WDR7Q9Y4E6 1490 aa25.38■■□□□ 1.65
C1orf56-201ENST00000368926 MAGI3Q5TCQ9 1506 aa25.38■■□□□ 1.65
C1orf56-201ENST00000368926 PLEKHD1A6NEE1 506 aa25.35■■□□□ 1.65
C1orf56-201ENST00000368926 CDK11AQ9UQ88 783 aaPredicted RBP25.35■■□□□ 1.65
C1orf56-201ENST00000368926 TROQ12816 1431 aaPredicted RBP25.32■■□□□ 1.64
C1orf56-201ENST00000368926 LRRC9Q6ZRR7 1453 aa25.29■■□□□ 1.64
C1orf56-201ENST00000368926 KANK4Q5T7N3 995 aaPredicted RBP25.28■■□□□ 1.64
C1orf56-201ENST00000368926 ABCC10Q5T3U5 1492 aa25.28■■□□□ 1.64
C1orf56-201ENST00000368926 MTUS2Q5JR59 1369 aa25.27■■□□□ 1.64
C1orf56-201ENST00000368926 DIP2BQ9P265 1576 aa25.27■■□□□ 1.64
C1orf56-201ENST00000368926 KCNH8Q96L42 1107 aa25.27■■□□□ 1.64
C1orf56-201ENST00000368926 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
C1orf56-201ENST00000368926 KIF14Q15058 1648 aa25.25■■□□□ 1.63
C1orf56-201ENST00000368926 GLI2P10070 1586 aa25.22■■□□□ 1.63
C1orf56-201ENST00000368926 KIF13AQ9H1H9 1805 aa25.22■■□□□ 1.63
C1orf56-201ENST00000368926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.2■■□□□ 1.62
C1orf56-201ENST00000368926 FAM69CQ0P6D2 419 aa25.19■■□□□ 1.62
C1orf56-201ENST00000368926 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
C1orf56-201ENST00000368926 ABCA9Q8IUA7 1624 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms