RNA–Protein interactions for RNA: ENST00000368926.5

C1orf56-201, Transcript of chromosome 1 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf56, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-201ENST00000368926 NISCHQ9Y2I1 1504 aa38.37■■■■□ 3.73
C1orf56-201ENST00000368926 CCDC180Q9P1Z9 1646 aa33.86■■■■□ 3.01
C1orf56-201ENST00000368926 ABCC9O60706 1549 aa32.65■■■□□ 2.82
C1orf56-201ENST00000368926 ZCCHC6Q5VYS8 1495 aaKnown RBP32.07■■■□□ 2.72
C1orf56-201ENST00000368926 DCAF8L2P0C7V8 631 aa31.8■■■□□ 2.68
C1orf56-201ENST00000368926 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
C1orf56-201ENST00000368926 NACADO15069 1562 aa31.71■■■□□ 2.67
C1orf56-201ENST00000368926 MYO15BQ96JP2 1530 aa31.69■■■□□ 2.66
C1orf56-201ENST00000368926 RB1CC1Q8TDY2 1594 aa31.61■■■□□ 2.65
C1orf56-201ENST00000368926 SCRIBQ14160 1630 aa30.97■■■□□ 2.55
C1orf56-201ENST00000368926 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
C1orf56-201ENST00000368926 BICRAQ9NZM4 1560 aa30.7■■■□□ 2.5
C1orf56-201ENST00000368926 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
C1orf56-201ENST00000368926 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
C1orf56-201ENST00000368926 CECR2Q9BXF3 1484 aa29.85■■■□□ 2.37
C1orf56-201ENST00000368926 EIF4G1Q04637 1599 aaKnown RBP29.82■■■□□ 2.36
C1orf56-201ENST00000368926 BAZ1AQ9NRL2 1556 aaPredicted RBP29.68■■■□□ 2.34
C1orf56-201ENST00000368926 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
C1orf56-201ENST00000368926 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
C1orf56-201ENST00000368926 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
C1orf56-201ENST00000368926 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
C1orf56-201ENST00000368926 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
C1orf56-201ENST00000368926 PEG3Q9GZU2 1588 aa29.36■■■□□ 2.29
C1orf56-201ENST00000368926 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
C1orf56-201ENST00000368926 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
C1orf56-201ENST00000368926 WIZO95785 1651 aa29.3■■■□□ 2.28
C1orf56-201ENST00000368926 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
C1orf56-201ENST00000368926 HMGXB3Q12766 1538 aa29.16■■■□□ 2.26
C1orf56-201ENST00000368926 BAZ1BQ9UIG0 1483 aaKnown RBP29.14■■■□□ 2.26
C1orf56-201ENST00000368926 SUPT5HO00267 1087 aaKnown RBP29.14■■■□□ 2.25
C1orf56-201ENST00000368926 TOP2AP11388 1531 aaKnown RBP29■■■□□ 2.23
C1orf56-201ENST00000368926 CCDC88BA6NC98 1476 aa28.67■■■□□ 2.18
C1orf56-201ENST00000368926 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
C1orf56-201ENST00000368926 HRCP23327 699 aa28.62■■■□□ 2.17
C1orf56-201ENST00000368926 NESP48681 1621 aa28.44■■■□□ 2.14
C1orf56-201ENST00000368926 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
C1orf56-201ENST00000368926 LAMC3Q9Y6N6 1575 aa28.4■■■□□ 2.14
C1orf56-201ENST00000368926 CFTRP13569 1480 aa28.38■■■□□ 2.13
C1orf56-201ENST00000368926 PRDM2Q13029 1718 aa28.21■■■□□ 2.11
C1orf56-201ENST00000368926 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
C1orf56-201ENST00000368926 PCGF6Q9BYE7 350 aa28.16■■■□□ 2.1
C1orf56-201ENST00000368926 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
C1orf56-201ENST00000368926 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
C1orf56-201ENST00000368926 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
C1orf56-201ENST00000368926 CEP164Q9UPV0 1460 aa28.01■■■□□ 2.07
C1orf56-201ENST00000368926 THOC2Q8NI27 1593 aaKnown RBP27.89■■■□□ 2.05
C1orf56-201ENST00000368926 MRC2Q9UBG0 1479 aa27.88■■■□□ 2.05
C1orf56-201ENST00000368926 URB2Q14146 1524 aaKnown RBP27.82■■■□□ 2.04
C1orf56-201ENST00000368926 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
C1orf56-201ENST00000368926 WDR62O43379 1518 aa27.78■■■□□ 2.04
C1orf56-201ENST00000368926 PPARGC1BQ86YN6 1023 aaKnown RBP27.74■■■□□ 2.03
C1orf56-201ENST00000368926 CUX1P39880 1505 aa27.74■■■□□ 2.03
C1orf56-201ENST00000368926 DNMBPQ6XZF7 1577 aa27.74■■■□□ 2.03
C1orf56-201ENST00000368926 TOPBP1Q92547 1522 aa27.73■■■□□ 2.03
C1orf56-201ENST00000368926 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.03
C1orf56-201ENST00000368926 LOC105371045A0A1W2PR82 267 aa27.7■■■□□ 2.02
C1orf56-201ENST00000368926 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
C1orf56-201ENST00000368926 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
C1orf56-201ENST00000368926 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
C1orf56-201ENST00000368926 BIVM-ERCC5R4GMW8 1640 aa27.61■■■□□ 2.01
C1orf56-201ENST00000368926 CUX2O14529 1486 aa27.59■■■□□ 2.01
C1orf56-201ENST00000368926 FGD5Q6ZNL6 1462 aa27.54■■■□□ 2
C1orf56-201ENST00000368926 POLA1P09884 1462 aaPredicted RBP27.52■■■□□ 2
C1orf56-201ENST00000368926 RAD54L2Q9Y4B4 1467 aa27.42■■□□□ 1.98
C1orf56-201ENST00000368926 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
C1orf56-201ENST00000368926 SOGA1O94964 1423 aa27.41■■□□□ 1.98
C1orf56-201ENST00000368926 TARBP1Q13395 1621 aaKnown RBP27.4■■□□□ 1.98
C1orf56-201ENST00000368926 ZEB1P37275 1124 aaPredicted RBP27.4■■□□□ 1.98
C1orf56-201ENST00000368926 TRIM41Q8WV44 630 aa27.39■■□□□ 1.98
C1orf56-201ENST00000368926 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
C1orf56-201ENST00000368926 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
C1orf56-201ENST00000368926 ZNF608Q9ULD9 1512 aaPredicted RBP27.27■■□□□ 1.96
C1orf56-201ENST00000368926 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
C1orf56-201ENST00000368926 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
C1orf56-201ENST00000368926 AQRO60306 1485 aaKnown RBP eCLIP27.18■■□□□ 1.94
C1orf56-201ENST00000368926 ABCA5Q8WWZ7 1642 aa27.15■■□□□ 1.94
C1orf56-201ENST00000368926 GAPVD1Q14C86 1478 aa27.1■■□□□ 1.93
C1orf56-201ENST00000368926 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
C1orf56-201ENST00000368926 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
C1orf56-201ENST00000368926 PBRM1Q86U86 1689 aa27.03■■□□□ 1.92
C1orf56-201ENST00000368926 GRIN2BQ13224 1484 aa27.02■■□□□ 1.92
C1orf56-201ENST00000368926 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
C1orf56-201ENST00000368926 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
C1orf56-201ENST00000368926 IGF1RP08069 1367 aa26.93■■□□□ 1.9
C1orf56-201ENST00000368926 MAGI1Q96QZ7 1491 aaPredicted RBP26.9■■□□□ 1.9
C1orf56-201ENST00000368926 EEA1Q15075 1411 aa26.9■■□□□ 1.9
C1orf56-201ENST00000368926 PELP1Q8IZL8 1130 aaKnown RBP26.89■■□□□ 1.89
C1orf56-201ENST00000368926 FAM9AQ8IZU1 332 aaPredicted RBP26.86■■□□□ 1.89
C1orf56-201ENST00000368926 ADAMTS12P58397 1594 aa26.85■■□□□ 1.89
C1orf56-201ENST00000368926 CUL7Q14999 1698 aa26.82■■□□□ 1.88
C1orf56-201ENST00000368926 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
C1orf56-201ENST00000368926 CSRNP3Q8WYN3 585 aa26.8■■□□□ 1.88
C1orf56-201ENST00000368926 SYNJ2O15056 1496 aa26.79■■□□□ 1.88
C1orf56-201ENST00000368926 CARMIL1Q5VZK9 1371 aa26.77■■□□□ 1.88
C1orf56-201ENST00000368926 CHD1O14646 1710 aa26.75■■□□□ 1.87
C1orf56-201ENST00000368926 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
C1orf56-201ENST00000368926 CHMP7Q8WUX9 453 aaPredicted RBP26.71■■□□□ 1.87
C1orf56-201ENST00000368926 FBLN2P98095 1184 aa26.7■■□□□ 1.87
C1orf56-201ENST00000368926 GRIN2AQ12879 1464 aa26.69■■□□□ 1.86
C1orf56-201ENST00000368926 RAPGEF2Q9Y4G8 1499 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms