RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 TARBP1Q13395 1621 aaKnown RBP15.22■□□□□ 0.03
LYSMD1-201ENST00000368908 WDR97A6NE52 1622 aa15.22■□□□□ 0.03
LYSMD1-201ENST00000368908 RAPGEF2Q9Y4G8 1499 aa15.18■□□□□ 0.02
LYSMD1-201ENST00000368908 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
LYSMD1-201ENST00000368908 RRBP1Q9P2E9 1410 aaKnown RBP15.16■□□□□ 0.02
LYSMD1-201ENST00000368908 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
LYSMD1-201ENST00000368908 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
LYSMD1-201ENST00000368908 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
LYSMD1-201ENST00000368908 EIF4G3O43432 1585 aaKnown RBP15.12■□□□□ 0.01
LYSMD1-201ENST00000368908 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
LYSMD1-201ENST00000368908 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
LYSMD1-201ENST00000368908 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
LYSMD1-201ENST00000368908 PRXQ9BXM0 1461 aa15.05■□□□□ -0
LYSMD1-201ENST00000368908 PBRM1Q86U86 1689 aa15.03■□□□□ -0
LYSMD1-201ENST00000368908 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -0
LYSMD1-201ENST00000368908 GRIN2BQ13224 1484 aa15.02□□□□□ -0.01
LYSMD1-201ENST00000368908 GAPVD1Q14C86 1478 aa15.02□□□□□ -0.01
LYSMD1-201ENST00000368908 TDRD9Q8NDG6 1382 aaKnown RBP15.01□□□□□ -0.01
LYSMD1-201ENST00000368908 MAPKBP1O60336 1514 aa15.01□□□□□ -0.01
LYSMD1-201ENST00000368908 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
LYSMD1-201ENST00000368908 MAGI1Q96QZ7 1491 aaPredicted RBP14.98□□□□□ -0.01
LYSMD1-201ENST00000368908 KIF27Q86VH2 1401 aa14.96□□□□□ -0.01
LYSMD1-201ENST00000368908 FKBP8Q14318 412 aa14.95□□□□□ -0.02
LYSMD1-201ENST00000368908 KANK4Q5T7N3 995 aaPredicted RBP14.95□□□□□ -0.02
LYSMD1-201ENST00000368908 MAP3K1Q13233 1512 aa14.94□□□□□ -0.02
LYSMD1-201ENST00000368908 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
LYSMD1-201ENST00000368908 NEFLP07196 543 aa14.93□□□□□ -0.02
LYSMD1-201ENST00000368908 RBM19Q9Y4C8 960 aaKnown RBP14.93□□□□□ -0.02
LYSMD1-201ENST00000368908 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
LYSMD1-201ENST00000368908 ADAMTS12P58397 1594 aa14.92□□□□□ -0.02
LYSMD1-201ENST00000368908 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
LYSMD1-201ENST00000368908 CCER2I3L3R5 266 aa14.91□□□□□ -0.02
LYSMD1-201ENST00000368908 BCANQ96GW7 911 aa14.9□□□□□ -0.02
LYSMD1-201ENST00000368908 CUL7Q14999 1698 aa14.9□□□□□ -0.02
LYSMD1-201ENST00000368908 CHD1O14646 1710 aa14.9□□□□□ -0.02
LYSMD1-201ENST00000368908 SYNJ2O15056 1496 aa14.9□□□□□ -0.02
LYSMD1-201ENST00000368908 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
LYSMD1-201ENST00000368908 FHAD1B1AJZ9 1412 aa14.87□□□□□ -0.03
LYSMD1-201ENST00000368908 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
LYSMD1-201ENST00000368908 TIAM1Q13009 1591 aa14.86□□□□□ -0.03
LYSMD1-201ENST00000368908 PPP1R15AO75807 674 aaPredicted RBP14.86□□□□□ -0.03
LYSMD1-201ENST00000368908 SETD5Q9C0A6 1442 aa14.86□□□□□ -0.03
LYSMD1-201ENST00000368908 IGF1RP08069 1367 aa14.84□□□□□ -0.03
LYSMD1-201ENST00000368908 RANGAP1P46060 587 aaPredicted RBP14.84□□□□□ -0.03
LYSMD1-201ENST00000368908 FANCIQ9NVI1 1328 aa14.83□□□□□ -0.04
LYSMD1-201ENST00000368908 GRIN2AQ12879 1464 aa14.81□□□□□ -0.04
LYSMD1-201ENST00000368908 DDX10Q13206 875 aaKnown RBP14.81□□□□□ -0.04
LYSMD1-201ENST00000368908 CFAP43Q8NDM7 1665 aa14.8□□□□□ -0.04
LYSMD1-201ENST00000368908 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
LYSMD1-201ENST00000368908 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
LYSMD1-201ENST00000368908 MYT1LQ9UL68 1186 aa14.77□□□□□ -0.05
LYSMD1-201ENST00000368908 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
LYSMD1-201ENST00000368908 ANP32CO43423 234 aa14.76□□□□□ -0.05
LYSMD1-201ENST00000368908 CARMIL1Q5VZK9 1371 aa14.76□□□□□ -0.05
LYSMD1-201ENST00000368908 MSH5O43196 834 aa14.76□□□□□ -0.05
LYSMD1-201ENST00000368908 NUP160Q12769 1436 aa14.76□□□□□ -0.05
LYSMD1-201ENST00000368908 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
LYSMD1-201ENST00000368908 FBLN2P98095 1184 aa14.73□□□□□ -0.05
LYSMD1-201ENST00000368908 CEP170Q5SW79 1584 aa14.73□□□□□ -0.05
LYSMD1-201ENST00000368908 ERICH6BQ5W0A0 696 aa14.72□□□□□ -0.05
LYSMD1-201ENST00000368908 DNAJC5Q9H3Z4 198 aa14.72□□□□□ -0.05
LYSMD1-201ENST00000368908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.05
LYSMD1-201ENST00000368908 ITGAEP38570 1179 aa14.7□□□□□ -0.06
LYSMD1-201ENST00000368908 TRIM52Q96A61 297 aa14.69□□□□□ -0.06
LYSMD1-201ENST00000368908 PHLDB1Q86UU1 1377 aa14.68□□□□□ -0.06
LYSMD1-201ENST00000368908 SIN3AQ96ST3 1273 aa14.68□□□□□ -0.06
LYSMD1-201ENST00000368908 CDK11AQ9UQ88 783 aaPredicted RBP14.68□□□□□ -0.06
LYSMD1-201ENST00000368908 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
LYSMD1-201ENST00000368908 ERICH6Q7L0X2 663 aa14.66□□□□□ -0.06
LYSMD1-201ENST00000368908 KIAA0586Q9BVV6 1533 aa14.65□□□□□ -0.06
LYSMD1-201ENST00000368908 PCF11O94913 1555 aaKnown RBP14.64□□□□□ -0.07
LYSMD1-201ENST00000368908 CTTNBP2Q8WZ74 1663 aa14.63□□□□□ -0.07
LYSMD1-201ENST00000368908 IQGAP2Q13576 1575 aa14.6□□□□□ -0.07
LYSMD1-201ENST00000368908 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
LYSMD1-201ENST00000368908 TONSLQ96HA7 1378 aa14.59□□□□□ -0.07
LYSMD1-201ENST00000368908 FYCO1Q9BQS8 1478 aa14.59□□□□□ -0.07
LYSMD1-201ENST00000368908 ARHGEF11O15085 1522 aa14.59□□□□□ -0.07
LYSMD1-201ENST00000368908 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
LYSMD1-201ENST00000368908 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
LYSMD1-201ENST00000368908 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
LYSMD1-201ENST00000368908 PPP4R2Q9NY27 417 aa14.57□□□□□ -0.08
LYSMD1-201ENST00000368908 UACAQ9BZF9 1416 aa14.57□□□□□ -0.08
LYSMD1-201ENST00000368908 FAM50AQ14320 339 aaKnown RBP14.56□□□□□ -0.08
LYSMD1-201ENST00000368908 KDM5BQ9UGL1 1544 aa14.56□□□□□ -0.08
LYSMD1-201ENST00000368908 EFCAB5A4FU69 1503 aa14.55□□□□□ -0.08
LYSMD1-201ENST00000368908 CCDC18Q5T9S5 1454 aa14.55□□□□□ -0.08
LYSMD1-201ENST00000368908 UGGT2Q9NYU1 1516 aa14.55□□□□□ -0.08
LYSMD1-201ENST00000368908 PTPN23Q9H3S7 1636 aa14.55□□□□□ -0.08
LYSMD1-201ENST00000368908 NCOA2Q15596 1464 aa14.54□□□□□ -0.08
LYSMD1-201ENST00000368908 HNRNPUQ00839 825 aaKnown RBP eCLIP14.54□□□□□ -0.08
LYSMD1-201ENST00000368908 HFM1A2PYH4 1435 aa14.53□□□□□ -0.08
LYSMD1-201ENST00000368908 HIRIP3Q9BW71 556 aaPredicted RBP14.53□□□□□ -0.08
LYSMD1-201ENST00000368908 JPH4Q96JJ6 628 aa14.52□□□□□ -0.08
LYSMD1-201ENST00000368908 CASKIN1Q8WXD9 1431 aa14.51□□□□□ -0.09
LYSMD1-201ENST00000368908 PRG4Q92954 1404 aaPredicted RBP14.51□□□□□ -0.09
LYSMD1-201ENST00000368908 FGD6Q6ZV73 1430 aa14.51□□□□□ -0.09
LYSMD1-201ENST00000368908 PRKCSHP14314 528 aaPredicted RBP14.5□□□□□ -0.09
LYSMD1-201ENST00000368908 DEKP35659 375 aaKnown RBP14.49□□□□□ -0.09
LYSMD1-201ENST00000368908 ERCC6L2Q5T890 1561 aa14.48□□□□□ -0.09
LYSMD1-201ENST00000368908 CARMIL2Q6F5E8 1435 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms