RNA–Protein interactions for RNA: ENST00000368521.9

C1orf43-206, Transcript of chromosome 1 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf43, Length 1,708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-206ENST00000368521 CTTNBP2Q8WZ74 1663 aa22.39■■□□□ 1.17
C1orf43-206ENST00000368521 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.17
C1orf43-206ENST00000368521 CLSPNQ9HAW4 1339 aa22.34■■□□□ 1.17
C1orf43-206ENST00000368521 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
C1orf43-206ENST00000368521 HNRNPUL2Q1KMD3 747 aaKnown RBP22.33■■□□□ 1.17
C1orf43-206ENST00000368521 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
C1orf43-206ENST00000368521 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
C1orf43-206ENST00000368521 LRRC9Q6ZRR7 1453 aa22.3■■□□□ 1.16
C1orf43-206ENST00000368521 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
C1orf43-206ENST00000368521 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
C1orf43-206ENST00000368521 CASKIN1Q8WXD9 1431 aa22.29■■□□□ 1.16
C1orf43-206ENST00000368521 FMN1Q68DA7 1419 aa22.27■■□□□ 1.16
C1orf43-206ENST00000368521 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
C1orf43-206ENST00000368521 PCF11O94913 1555 aaKnown RBP22.25■■□□□ 1.15
C1orf43-206ENST00000368521 WDR62O43379 1518 aa22.21■■□□□ 1.15
C1orf43-206ENST00000368521 FHOD3Q2V2M9 1422 aa22.21■■□□□ 1.15
C1orf43-206ENST00000368521 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
C1orf43-206ENST00000368521 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
C1orf43-206ENST00000368521 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
C1orf43-206ENST00000368521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.17■■□□□ 1.14
C1orf43-206ENST00000368521 THOC2Q8NI27 1593 aaKnown RBP22.17■■□□□ 1.14
C1orf43-206ENST00000368521 GRIN2BQ13224 1484 aa22.16■■□□□ 1.14
C1orf43-206ENST00000368521 SNAPC4Q5SXM2 1469 aa22.16■■□□□ 1.14
C1orf43-206ENST00000368521 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
C1orf43-206ENST00000368521 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
C1orf43-206ENST00000368521 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
C1orf43-206ENST00000368521 P3H3Q8IVL6 736 aa22.07■■□□□ 1.12
C1orf43-206ENST00000368521 IQGAP2Q13576 1575 aa22.04■■□□□ 1.12
C1orf43-206ENST00000368521 ZNF316A6NFI3 1004 aaPredicted RBP22.03■■□□□ 1.12
C1orf43-206ENST00000368521 UGGT2Q9NYU1 1516 aa22.01■■□□□ 1.11
C1orf43-206ENST00000368521 CCDC18Q5T9S5 1454 aa21.99■■□□□ 1.11
C1orf43-206ENST00000368521 SETD5Q9C0A6 1442 aa21.98■■□□□ 1.11
C1orf43-206ENST00000368521 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
C1orf43-206ENST00000368521 EHBP1L1Q8N3D4 1523 aa21.95■■□□□ 1.1
C1orf43-206ENST00000368521 KIAA0586Q9BVV6 1533 aa21.95■■□□□ 1.1
C1orf43-206ENST00000368521 ZNF608Q9ULD9 1512 aaPredicted RBP21.95■■□□□ 1.1
C1orf43-206ENST00000368521 MTUS2Q5JR59 1369 aa21.93■■□□□ 1.1
C1orf43-206ENST00000368521 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
C1orf43-206ENST00000368521 FGD6Q6ZV73 1430 aa21.93■■□□□ 1.1
C1orf43-206ENST00000368521 HECW1Q76N89 1606 aa21.92■■□□□ 1.1
C1orf43-206ENST00000368521 ATP1B4Q9UN42 357 aaPredicted RBP21.92■■□□□ 1.1
C1orf43-206ENST00000368521 MAGI1Q96QZ7 1491 aaPredicted RBP21.91■■□□□ 1.1
C1orf43-206ENST00000368521 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
C1orf43-206ENST00000368521 ARHGEF11O15085 1522 aa21.91■■□□□ 1.1
C1orf43-206ENST00000368521 EIF4G3O43432 1585 aaKnown RBP21.9■■□□□ 1.1
C1orf43-206ENST00000368521 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.09
C1orf43-206ENST00000368521 GRIN2AQ12879 1464 aa21.88■■□□□ 1.09
C1orf43-206ENST00000368521 NCOA2Q15596 1464 aa21.86■■□□□ 1.09
C1orf43-206ENST00000368521 MYOM3Q5VTT5 1437 aa21.86■■□□□ 1.09
C1orf43-206ENST00000368521 FAM50AQ14320 339 aaKnown RBP21.84■■□□□ 1.09
C1orf43-206ENST00000368521 EPRSP07814 1512 aaKnown RBP21.82■■□□□ 1.08
C1orf43-206ENST00000368521 ITGAEP38570 1179 aa21.81■■□□□ 1.08
C1orf43-206ENST00000368521 MAPKBP1O60336 1514 aa21.81■■□□□ 1.08
C1orf43-206ENST00000368521 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
C1orf43-206ENST00000368521 KIAA0556O60303 1618 aa21.8■■□□□ 1.08
C1orf43-206ENST00000368521 TIMELESSQ9UNS1 1208 aa21.8■■□□□ 1.08
C1orf43-206ENST00000368521 DISP1Q96F81 1524 aa21.8■■□□□ 1.08
C1orf43-206ENST00000368521 TCOF1Q13428 1488 aaKnown RBP21.79■■□□□ 1.08
C1orf43-206ENST00000368521 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
C1orf43-206ENST00000368521 MAGI3Q5TCQ9 1506 aa21.76■■□□□ 1.07
C1orf43-206ENST00000368521 MIA2Q96PC5 1412 aa21.76■■□□□ 1.07
C1orf43-206ENST00000368521 NUP160Q12769 1436 aa21.73■■□□□ 1.07
C1orf43-206ENST00000368521 PTPN23Q9H3S7 1636 aa21.72■■□□□ 1.07
C1orf43-206ENST00000368521 AKNAQ7Z591 1439 aa21.71■■□□□ 1.07
C1orf43-206ENST00000368521 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
C1orf43-206ENST00000368521 PTPRKQ15262 1439 aa21.67■■□□□ 1.06
C1orf43-206ENST00000368521 ACIN1Q9UKV3 1341 aaKnown RBP21.67■■□□□ 1.06
C1orf43-206ENST00000368521 RAPGEF6Q8TEU7 1601 aa21.67■■□□□ 1.06
C1orf43-206ENST00000368521 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
C1orf43-206ENST00000368521 UACAQ9BZF9 1416 aa21.65■■□□□ 1.06
C1orf43-206ENST00000368521 NUP153P49790 1475 aaKnown RBP21.65■■□□□ 1.06
C1orf43-206ENST00000368521 NAIPQ13075 1403 aa21.65■■□□□ 1.06
C1orf43-206ENST00000368521 CDK13Q14004 1512 aaKnown RBP21.64■■□□□ 1.05
C1orf43-206ENST00000368521 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
C1orf43-206ENST00000368521 CDK11AQ9UQ88 783 aaPredicted RBP21.61■■□□□ 1.05
C1orf43-206ENST00000368521 CENPBP07199 599 aaPredicted RBP21.57■■□□□ 1.04
C1orf43-206ENST00000368521 GCC2Q8IWJ2 1684 aa21.56■■□□□ 1.04
C1orf43-206ENST00000368521 JPH4Q96JJ6 628 aa21.55■■□□□ 1.04
C1orf43-206ENST00000368521 ROCK1Q13464 1354 aa21.54■■□□□ 1.04
C1orf43-206ENST00000368521 TROQ12816 1431 aaPredicted RBP21.53■■□□□ 1.04
C1orf43-206ENST00000368521 ADCY10Q96PN6 1610 aa21.51■■□□□ 1.03
C1orf43-206ENST00000368521 MIER1Q8N108 512 aa21.49■■□□□ 1.03
C1orf43-206ENST00000368521 ABCA8O94911 1581 aa21.47■■□□□ 1.03
C1orf43-206ENST00000368521 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
C1orf43-206ENST00000368521 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
C1orf43-206ENST00000368521 SIN3AQ96ST3 1273 aa21.46■■□□□ 1.03
C1orf43-206ENST00000368521 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.02
C1orf43-206ENST00000368521 ITSN2Q9NZM3 1697 aa21.44■■□□□ 1.02
C1orf43-206ENST00000368521 DAPK1P53355 1430 aa21.44■■□□□ 1.02
C1orf43-206ENST00000368521 FBLN2P98095 1184 aa21.42■■□□□ 1.02
C1orf43-206ENST00000368521 ABCC5O15440 1437 aa21.41■■□□□ 1.02
C1orf43-206ENST00000368521 PRG4Q92954 1404 aaPredicted RBP21.39■■□□□ 1.02
C1orf43-206ENST00000368521 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
C1orf43-206ENST00000368521 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
C1orf43-206ENST00000368521 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
C1orf43-206ENST00000368521 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
C1orf43-206ENST00000368521 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
C1orf43-206ENST00000368521 ATP10BO94823 1461 aa21.34■■□□□ 1.01
C1orf43-206ENST00000368521 ADGRL2O95490 1459 aa21.34■■□□□ 1.01
C1orf43-206ENST00000368521 DENND4BO75064 1496 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms