RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 CCER2I3L3R5 266 aa20■□□□□ 0.79
CCT3-206ENST00000368262 LRRC9Q6ZRR7 1453 aa20■□□□□ 0.79
CCT3-206ENST00000368262 FKBP8Q14318 412 aa19.98■□□□□ 0.79
CCT3-206ENST00000368262 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
CCT3-206ENST00000368262 CFTRP13569 1480 aa19.95■□□□□ 0.78
CCT3-206ENST00000368262 BCL11AQ9H165 835 aa19.94■□□□□ 0.78
CCT3-206ENST00000368262 DDX10Q13206 875 aaKnown RBP19.92■□□□□ 0.78
CCT3-206ENST00000368262 BCANQ96GW7 911 aa19.92■□□□□ 0.78
CCT3-206ENST00000368262 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
CCT3-206ENST00000368262 NEFLP07196 543 aa19.9■□□□□ 0.78
CCT3-206ENST00000368262 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
CCT3-206ENST00000368262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.89■□□□□ 0.77
CCT3-206ENST00000368262 ITGAEP38570 1179 aa19.89■□□□□ 0.77
CCT3-206ENST00000368262 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
CCT3-206ENST00000368262 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
CCT3-206ENST00000368262 IGF1RP08069 1367 aa19.86■□□□□ 0.77
CCT3-206ENST00000368262 SIN3AQ96ST3 1273 aa19.84■□□□□ 0.77
CCT3-206ENST00000368262 ANP32CO43423 234 aa19.8■□□□□ 0.76
CCT3-206ENST00000368262 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.765e-8■■■■■ 30.7
CCT3-206ENST00000368262 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
CCT3-206ENST00000368262 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
CCT3-206ENST00000368262 EFCAB5A4FU69 1503 aa19.76■□□□□ 0.75
CCT3-206ENST00000368262 FANCIQ9NVI1 1328 aa19.74■□□□□ 0.75
CCT3-206ENST00000368262 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
CCT3-206ENST00000368262 FAM50AQ14320 339 aaKnown RBP19.71■□□□□ 0.75
CCT3-206ENST00000368262 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
CCT3-206ENST00000368262 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
CCT3-206ENST00000368262 KDM5BQ9UGL1 1544 aa19.7■□□□□ 0.74
CCT3-206ENST00000368262 MSH5O43196 834 aa19.69■□□□□ 0.74
CCT3-206ENST00000368262 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
CCT3-206ENST00000368262 CCDC18Q5T9S5 1454 aa19.68■□□□□ 0.74
CCT3-206ENST00000368262 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
CCT3-206ENST00000368262 HFM1A2PYH4 1435 aa19.67■□□□□ 0.74
CCT3-206ENST00000368262 CTTNBP2Q8WZ74 1663 aa19.66■□□□□ 0.74
CCT3-206ENST00000368262 TONSLQ96HA7 1378 aa19.66■□□□□ 0.74
CCT3-206ENST00000368262 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
CCT3-206ENST00000368262 ERICH6BQ5W0A0 696 aa19.65■□□□□ 0.74
CCT3-206ENST00000368262 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
CCT3-206ENST00000368262 HIRIP3Q9BW71 556 aaPredicted RBP19.61■□□□□ 0.73
CCT3-206ENST00000368262 CUL7Q14999 1698 aa19.6■□□□□ 0.73
CCT3-206ENST00000368262 FHOD3Q2V2M9 1422 aa19.59■□□□□ 0.73
CCT3-206ENST00000368262 NCOA2Q15596 1464 aa19.59■□□□□ 0.73
CCT3-206ENST00000368262 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
CCT3-206ENST00000368262 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
CCT3-206ENST00000368262 PTPRKQ15262 1439 aa19.55■□□□□ 0.72
CCT3-206ENST00000368262 LRRIQ1Q96JM4 1722 aa19.55■□□□□ 0.72
CCT3-206ENST00000368262 NAIPQ13075 1403 aa19.55■□□□□ 0.72
CCT3-206ENST00000368262 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
CCT3-206ENST00000368262 HECW1Q76N89 1606 aa19.54■□□□□ 0.72
CCT3-206ENST00000368262 GCC2Q8IWJ2 1684 aa19.54■□□□□ 0.72
CCT3-206ENST00000368262 THOC2Q8NI27 1593 aaKnown RBP19.54■□□□□ 0.72
CCT3-206ENST00000368262 FMN1Q68DA7 1419 aa19.53■□□□□ 0.72
CCT3-206ENST00000368262 MYT1LQ9UL68 1186 aa19.52■□□□□ 0.72
CCT3-206ENST00000368262 ABCA10Q8WWZ4 1543 aa19.52■□□□□ 0.72
CCT3-206ENST00000368262 SAMD9Q5K651 1589 aa19.51■□□□□ 0.71
CCT3-206ENST00000368262 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCT3-206ENST00000368262 SUPT6HQ7KZ85 1726 aaKnown RBP19.5■□□□□ 0.71
CCT3-206ENST00000368262 PPP4R2Q9NY27 417 aa19.49■□□□□ 0.71
CCT3-206ENST00000368262 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
CCT3-206ENST00000368262 MYOM3Q5VTT5 1437 aa19.48■□□□□ 0.71
CCT3-206ENST00000368262 CNTLNQ9NXG0 1405 aa19.48■□□□□ 0.71
CCT3-206ENST00000368262 POLR1AO95602 1720 aaPredicted RBP19.47■□□□□ 0.71
CCT3-206ENST00000368262 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
CCT3-206ENST00000368262 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
CCT3-206ENST00000368262 EHBP1L1Q8N3D4 1523 aa19.46■□□□□ 0.71
CCT3-206ENST00000368262 WASHC2AQ641Q2 1341 aa19.45■□□□□ 0.7
CCT3-206ENST00000368262 AKNAQ7Z591 1439 aa19.45■□□□□ 0.7
CCT3-206ENST00000368262 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
CCT3-206ENST00000368262 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
CCT3-206ENST00000368262 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
CCT3-206ENST00000368262 UGGT2Q9NYU1 1516 aa19.42■□□□□ 0.7
CCT3-206ENST00000368262 DENND4BO75064 1496 aaPredicted RBP19.42■□□□□ 0.7
CCT3-206ENST00000368262 TCOF1Q13428 1488 aaKnown RBP19.42■□□□□ 0.7
CCT3-206ENST00000368262 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
CCT3-206ENST00000368262 ERICH6Q7L0X2 663 aa19.42■□□□□ 0.7
CCT3-206ENST00000368262 HSPA5P11021 654 aaKnown RBP19.4■□□□□ 0.7
CCT3-206ENST00000368262 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
CCT3-206ENST00000368262 IRX6P78412 446 aaPredicted RBP19.38■□□□□ 0.69
CCT3-206ENST00000368262 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
CCT3-206ENST00000368262 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
CCT3-206ENST00000368262 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
CCT3-206ENST00000368262 ZBED9Q6R2W3 1325 aa19.36■□□□□ 0.69
CCT3-206ENST00000368262 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
CCT3-206ENST00000368262 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
CCT3-206ENST00000368262 CCDC7Q96M83 1385 aa19.33■□□□□ 0.69
CCT3-206ENST00000368262 EIF4G2P78344 907 aaKnown RBP eCLIP19.33■□□□□ 0.68
CCT3-206ENST00000368262 KDM6BO15054 1643 aa19.31■□□□□ 0.68
CCT3-206ENST00000368262 PRKRIP1Q9H875 184 aaPredicted RBP19.3■□□□□ 0.68
CCT3-206ENST00000368262 MAGI3Q5TCQ9 1506 aa19.3■□□□□ 0.68
CCT3-206ENST00000368262 CCDC184Q52MB2 194 aa19.29■□□□□ 0.68
CCT3-206ENST00000368262 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
CCT3-206ENST00000368262 TEX14Q8IWB6 1497 aa19.25■□□□□ 0.67
CCT3-206ENST00000368262 SPATA31E1Q6ZUB1 1445 aa19.24■□□□□ 0.67
CCT3-206ENST00000368262 DEKP35659 375 aaKnown RBP19.23■□□□□ 0.67
CCT3-206ENST00000368262 RPRD2Q5VT52 1461 aaKnown RBP19.23■□□□□ 0.67
CCT3-206ENST00000368262 MIA2Q96PC5 1412 aa19.23■□□□□ 0.67
CCT3-206ENST00000368262 B4GALNT3Q6L9W6 998 aa19.22■□□□□ 0.67
CCT3-206ENST00000368262 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
CCT3-206ENST00000368262 NOP58Q9Y2X3 529 aaKnown RBP19.22■□□□□ 0.67
CCT3-206ENST00000368262 C11orf95C9JLR9 678 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms