RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 MAGI1Q96QZ7 1491 aaPredicted RBP18.08■□□□□ 0.49
NUP43-203ENST00000367404 GRIN2BQ13224 1484 aa18.06■□□□□ 0.48
NUP43-203ENST00000367404 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
NUP43-203ENST00000367404 SYNJ2O15056 1496 aa18.02■□□□□ 0.48
NUP43-203ENST00000367404 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
NUP43-203ENST00000367404 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
NUP43-203ENST00000367404 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
NUP43-203ENST00000367404 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
NUP43-203ENST00000367404 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
NUP43-203ENST00000367404 PBRM1Q86U86 1689 aa17.92■□□□□ 0.46
NUP43-203ENST00000367404 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
NUP43-203ENST00000367404 SLC4A2P04920 1241 aa17.89■□□□□ 0.45
NUP43-203ENST00000367404 GRIN2AQ12879 1464 aa17.83■□□□□ 0.45
NUP43-203ENST00000367404 ADAMTS12P58397 1594 aa17.82■□□□□ 0.44
NUP43-203ENST00000367404 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
NUP43-203ENST00000367404 NUP160Q12769 1436 aa17.81■□□□□ 0.44
NUP43-203ENST00000367404 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
NUP43-203ENST00000367404 CEP170Q5SW79 1584 aa17.77■□□□□ 0.44
NUP43-203ENST00000367404 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.44
NUP43-203ENST00000367404 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
NUP43-203ENST00000367404 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
NUP43-203ENST00000367404 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
NUP43-203ENST00000367404 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
NUP43-203ENST00000367404 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
NUP43-203ENST00000367404 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
NUP43-203ENST00000367404 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.41
NUP43-203ENST00000367404 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
NUP43-203ENST00000367404 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
NUP43-203ENST00000367404 JPH4Q96JJ6 628 aa17.53■□□□□ 0.4
NUP43-203ENST00000367404 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
NUP43-203ENST00000367404 CAPN15O75808 1086 aa17.49■□□□□ 0.39
NUP43-203ENST00000367404 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
NUP43-203ENST00000367404 ABCC10Q5T3U5 1492 aa17.47■□□□□ 0.39
NUP43-203ENST00000367404 KIAA0586Q9BVV6 1533 aa17.44■□□□□ 0.38
NUP43-203ENST00000367404 IGF1RP08069 1367 aa17.43■□□□□ 0.38
NUP43-203ENST00000367404 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
NUP43-203ENST00000367404 DIP2BQ9P265 1576 aa17.41■□□□□ 0.38
NUP43-203ENST00000367404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
NUP43-203ENST00000367404 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
NUP43-203ENST00000367404 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
NUP43-203ENST00000367404 CUL7Q14999 1698 aa17.4■□□□□ 0.38
NUP43-203ENST00000367404 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
NUP43-203ENST00000367404 DSG3P32926 999 aa17.37■□□□□ 0.37
NUP43-203ENST00000367404 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
NUP43-203ENST00000367404 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
NUP43-203ENST00000367404 APLP2Q06481 763 aa17.34■□□□□ 0.37
NUP43-203ENST00000367404 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
NUP43-203ENST00000367404 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
NUP43-203ENST00000367404 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
NUP43-203ENST00000367404 PTPRGP23470 1445 aa17.28■□□□□ 0.36
NUP43-203ENST00000367404 KDM6BO15054 1643 aa17.27■□□□□ 0.36
NUP43-203ENST00000367404 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
NUP43-203ENST00000367404 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
NUP43-203ENST00000367404 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
NUP43-203ENST00000367404 IQGAP2Q13576 1575 aa17.23■□□□□ 0.35
NUP43-203ENST00000367404 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
NUP43-203ENST00000367404 UHRF1BP1LA0JNW5 1464 aa17.23■□□□□ 0.35
NUP43-203ENST00000367404 GLI2P10070 1586 aa17.19■□□□□ 0.34
NUP43-203ENST00000367404 PLB1Q6P1J6 1458 aa17.19■□□□□ 0.34
NUP43-203ENST00000367404 DISP1Q96F81 1524 aa17.19■□□□□ 0.34
NUP43-203ENST00000367404 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
NUP43-203ENST00000367404 KDM4FA0A1W2PPD8 638 aa17.18■□□□□ 0.34
NUP43-203ENST00000367404 UACAQ9BZF9 1416 aa17.16■□□□□ 0.34
NUP43-203ENST00000367404 ZBTB22O15209 634 aa17.16■□□□□ 0.34
NUP43-203ENST00000367404 UGGT2Q9NYU1 1516 aa17.15■□□□□ 0.34
NUP43-203ENST00000367404 PPRC1Q5VV67 1664 aaKnown RBP17.14■□□□□ 0.33
NUP43-203ENST00000367404 KDM5BQ9UGL1 1544 aa17.14■□□□□ 0.33
NUP43-203ENST00000367404 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
NUP43-203ENST00000367404 ABCB7O75027 752 aa17.13■□□□□ 0.33
NUP43-203ENST00000367404 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
NUP43-203ENST00000367404 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
NUP43-203ENST00000367404 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
NUP43-203ENST00000367404 KIAA0556O60303 1618 aa17.09■□□□□ 0.33
NUP43-203ENST00000367404 MAP3K4Q9Y6R4 1608 aa17.07■□□□□ 0.32
NUP43-203ENST00000367404 COL17A1Q9UMD9 1497 aaPredicted RBP17.06■□□□□ 0.32
NUP43-203ENST00000367404 ZCCHC11Q5TAX3 1644 aaKnown RBP17.05■□□□□ 0.32
NUP43-203ENST00000367404 TEX14Q8IWB6 1497 aa17.04■□□□□ 0.32
NUP43-203ENST00000367404 ADGRL1O94910 1474 aa17.01■□□□□ 0.31
NUP43-203ENST00000367404 WDR7Q9Y4E6 1490 aa17.01■□□□□ 0.31
NUP43-203ENST00000367404 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
NUP43-203ENST00000367404 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
NUP43-203ENST00000367404 ABCA8O94911 1581 aa16.96■□□□□ 0.31
NUP43-203ENST00000367404 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
NUP43-203ENST00000367404 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
NUP43-203ENST00000367404 MAGI3Q5TCQ9 1506 aa16.94■□□□□ 0.3
NUP43-203ENST00000367404 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
NUP43-203ENST00000367404 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
NUP43-203ENST00000367404 POLA2Q14181 598 aa16.87■□□□□ 0.29
NUP43-203ENST00000367404 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
NUP43-203ENST00000367404 ARAP3Q8WWN8 1544 aa16.8■□□□□ 0.28
NUP43-203ENST00000367404 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
NUP43-203ENST00000367404 KCNH8Q96L42 1107 aa16.8■□□□□ 0.28
NUP43-203ENST00000367404 ATP10BO94823 1461 aa16.8■□□□□ 0.28
NUP43-203ENST00000367404 SAMD9Q5K651 1589 aa16.77■□□□□ 0.28
NUP43-203ENST00000367404 ABCA9Q8IUA7 1624 aa16.76■□□□□ 0.27
NUP43-203ENST00000367404 PHLDB1Q86UU1 1377 aa16.75■□□□□ 0.27
NUP43-203ENST00000367404 KIF21BO75037 1637 aa16.74■□□□□ 0.27
NUP43-203ENST00000367404 ATXN8OSP0DMR3 200 aa16.72■□□□□ 0.27
NUP43-203ENST00000367404 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
NUP43-203ENST00000367404 NEO1Q92859 1461 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms