RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 AEBP2Q6ZN18 517 aaPredicted RBP29.27■■■□□ 2.28
NUP43-203ENST00000367404 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
NUP43-203ENST00000367404 NISCHQ9Y2I1 1504 aa25.01■■□□□ 1.59
NUP43-203ENST00000367404 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
NUP43-203ENST00000367404 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
NUP43-203ENST00000367404 FOXD1Q16676 465 aa23.19■■□□□ 1.3
NUP43-203ENST00000367404 ABCC9O60706 1549 aa22.62■■□□□ 1.21
NUP43-203ENST00000367404 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
NUP43-203ENST00000367404 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
NUP43-203ENST00000367404 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.09
NUP43-203ENST00000367404 ADRA2BP18089 450 aa21.81■■□□□ 1.08
NUP43-203ENST00000367404 PIAS4Q8N2W9 510 aaPredicted RBP21.7■■□□□ 1.06
NUP43-203ENST00000367404 MSH5O43196 834 aa21.57■■□□□ 1.04
NUP43-203ENST00000367404 RB1CC1Q8TDY2 1594 aa21.48■■□□□ 1.03
NUP43-203ENST00000367404 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
NUP43-203ENST00000367404 NACADO15069 1562 aa21.32■■□□□ 1
NUP43-203ENST00000367404 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
NUP43-203ENST00000367404 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
NUP43-203ENST00000367404 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
NUP43-203ENST00000367404 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
NUP43-203ENST00000367404 BICRAQ9NZM4 1560 aa20.9■□□□□ 0.94
NUP43-203ENST00000367404 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
NUP43-203ENST00000367404 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
NUP43-203ENST00000367404 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
NUP43-203ENST00000367404 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
NUP43-203ENST00000367404 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
NUP43-203ENST00000367404 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
NUP43-203ENST00000367404 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
NUP43-203ENST00000367404 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
NUP43-203ENST00000367404 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
NUP43-203ENST00000367404 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
NUP43-203ENST00000367404 DMRT2Q9Y5R5 561 aa19.78■□□□□ 0.76
NUP43-203ENST00000367404 PPP4R3CPQ6ZMV5 832 aa19.74■□□□□ 0.75
NUP43-203ENST00000367404 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
NUP43-203ENST00000367404 NCAPD3P42695 1498 aa19.71■□□□□ 0.75
NUP43-203ENST00000367404 CUX2O14529 1486 aa19.62■□□□□ 0.73
NUP43-203ENST00000367404 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
NUP43-203ENST00000367404 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
NUP43-203ENST00000367404 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
NUP43-203ENST00000367404 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
NUP43-203ENST00000367404 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
NUP43-203ENST00000367404 BAZ1AQ9NRL2 1556 aaPredicted RBP19.42■□□□□ 0.7
NUP43-203ENST00000367404 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
NUP43-203ENST00000367404 NESP48681 1621 aa19.4■□□□□ 0.7
NUP43-203ENST00000367404 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
NUP43-203ENST00000367404 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
NUP43-203ENST00000367404 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.68
NUP43-203ENST00000367404 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.67
NUP43-203ENST00000367404 MROH2BQ7Z745 1585 aa19.25■□□□□ 0.67
NUP43-203ENST00000367404 HOXD11P31277 338 aaPredicted RBP19.16■□□□□ 0.66
NUP43-203ENST00000367404 PDS5BQ9NTI5 1447 aa19.15■□□□□ 0.66
NUP43-203ENST00000367404 KIF21AQ7Z4S6 1674 aa19.1■□□□□ 0.65
NUP43-203ENST00000367404 CADPSQ9ULU8 1353 aa19.07■□□□□ 0.64
NUP43-203ENST00000367404 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
NUP43-203ENST00000367404 MRC2Q9UBG0 1479 aa19.01■□□□□ 0.63
NUP43-203ENST00000367404 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
NUP43-203ENST00000367404 WDR62O43379 1518 aa18.99■□□□□ 0.63
NUP43-203ENST00000367404 WIZO95785 1651 aa18.97■□□□□ 0.63
NUP43-203ENST00000367404 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
NUP43-203ENST00000367404 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
NUP43-203ENST00000367404 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
NUP43-203ENST00000367404 CFTRP13569 1480 aa18.84■□□□□ 0.61
NUP43-203ENST00000367404 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
NUP43-203ENST00000367404 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
NUP43-203ENST00000367404 NPM3O75607 178 aaKnown RBP18.78■□□□□ 0.6
NUP43-203ENST00000367404 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
NUP43-203ENST00000367404 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
NUP43-203ENST00000367404 KCNA4P22459 653 aa18.64■□□□□ 0.57
NUP43-203ENST00000367404 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
NUP43-203ENST00000367404 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
NUP43-203ENST00000367404 CCDC88BA6NC98 1476 aa18.54■□□□□ 0.56
NUP43-203ENST00000367404 IFT140Q96RY7 1462 aa18.52■□□□□ 0.56
NUP43-203ENST00000367404 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
NUP43-203ENST00000367404 TOPBP1Q92547 1522 aa18.48■□□□□ 0.55
NUP43-203ENST00000367404 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
NUP43-203ENST00000367404 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
NUP43-203ENST00000367404 RIMBP3CA6NJZ7 1639 aa18.42■□□□□ 0.54
NUP43-203ENST00000367404 RIMBP3BA6NNM3 1639 aa18.42■□□□□ 0.54
NUP43-203ENST00000367404 RIMBP3Q9UFD9 1639 aa18.42■□□□□ 0.54
NUP43-203ENST00000367404 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
NUP43-203ENST00000367404 EIF4G3O43432 1585 aaKnown RBP18.39■□□□□ 0.53
NUP43-203ENST00000367404 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
NUP43-203ENST00000367404 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
NUP43-203ENST00000367404 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
NUP43-203ENST00000367404 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
NUP43-203ENST00000367404 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.528e-7■■■□□ 16.1
NUP43-203ENST00000367404 CHD1O14646 1710 aa18.22■□□□□ 0.51
NUP43-203ENST00000367404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.52e-7■□□□□ 8
NUP43-203ENST00000367404 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
NUP43-203ENST00000367404 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
NUP43-203ENST00000367404 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
NUP43-203ENST00000367404 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
NUP43-203ENST00000367404 SOGA1O94964 1423 aa18.16■□□□□ 0.5
NUP43-203ENST00000367404 CYB5RLQ6IPT4 315 aa18.16■□□□□ 0.5
NUP43-203ENST00000367404 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
NUP43-203ENST00000367404 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
NUP43-203ENST00000367404 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
NUP43-203ENST00000367404 FBLN2P98095 1184 aa18.11■□□□□ 0.49
NUP43-203ENST00000367404 CUX1P39880 1505 aa18.11■□□□□ 0.49
NUP43-203ENST00000367404 CLASP1Q7Z460 1538 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms