RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 EFCAB5A4FU69 1503 aa25.85■■□□□ 1.73
TRIM11-202ENST00000366699 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.72
TRIM11-202ENST00000366699 WDR97A6NE52 1622 aa25.82■■□□□ 1.72
TRIM11-202ENST00000366699 LRRC9Q6ZRR7 1453 aa25.78■■□□□ 1.72
TRIM11-202ENST00000366699 CENPBP07199 599 aaPredicted RBP25.78■■□□□ 1.72
TRIM11-202ENST00000366699 GAPVD1Q14C86 1478 aa25.77■■□□□ 1.72
TRIM11-202ENST00000366699 ABCA5Q8WWZ7 1642 aa25.76■■□□□ 1.72
TRIM11-202ENST00000366699 TDRD9Q8NDG6 1382 aaKnown RBP25.75■■□□□ 1.71
TRIM11-202ENST00000366699 PELP1Q8IZL8 1130 aaKnown RBP25.74■■□□□ 1.71
TRIM11-202ENST00000366699 CTTNBP2Q8WZ74 1663 aa25.74■■□□□ 1.71
TRIM11-202ENST00000366699 AQRO60306 1485 aaKnown RBP eCLIP25.74■■□□□ 1.711e-6■■■■■ 34.8
TRIM11-202ENST00000366699 P3H3Q8IVL6 736 aa25.73■■□□□ 1.71
TRIM11-202ENST00000366699 DHX57Q6P158 1386 aaKnown RBP25.73■■□□□ 1.71
TRIM11-202ENST00000366699 FYCO1Q9BQS8 1478 aa25.73■■□□□ 1.71
TRIM11-202ENST00000366699 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
TRIM11-202ENST00000366699 FHOD3Q2V2M9 1422 aa25.71■■□□□ 1.71
TRIM11-202ENST00000366699 PCF11O94913 1555 aaKnown RBP25.71■■□□□ 1.71
TRIM11-202ENST00000366699 CASKIN1Q8WXD9 1431 aa25.7■■□□□ 1.71
TRIM11-202ENST00000366699 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
TRIM11-202ENST00000366699 FMN1Q68DA7 1419 aa25.69■■□□□ 1.7
TRIM11-202ENST00000366699 CFAP43Q8NDM7 1665 aa25.69■■□□□ 1.7
TRIM11-202ENST00000366699 ATP1B4Q9UN42 357 aaPredicted RBP25.66■■□□□ 1.7
TRIM11-202ENST00000366699 PHLDB1Q86UU1 1377 aa25.61■■□□□ 1.69
TRIM11-202ENST00000366699 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
TRIM11-202ENST00000366699 ITGAEP38570 1179 aa25.6■■□□□ 1.69
TRIM11-202ENST00000366699 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
TRIM11-202ENST00000366699 SAMD9Q5K651 1589 aa25.55■■□□□ 1.68
TRIM11-202ENST00000366699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.52■■□□□ 1.68
TRIM11-202ENST00000366699 SNAPC4Q5SXM2 1469 aa25.52■■□□□ 1.68
TRIM11-202ENST00000366699 FAM50AQ14320 339 aaKnown RBP25.52■■□□□ 1.68
TRIM11-202ENST00000366699 RAB3GAP2Q9H2M9 1393 aa25.51■■□□□ 1.67
TRIM11-202ENST00000366699 MIER1Q8N108 512 aa25.51■■□□□ 1.67
TRIM11-202ENST00000366699 SETD5Q9C0A6 1442 aa25.51■■□□□ 1.67
TRIM11-202ENST00000366699 GTF3C3Q9Y5Q9 886 aa25.47■■□□□ 1.67
TRIM11-202ENST00000366699 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.67
TRIM11-202ENST00000366699 MTUS2Q5JR59 1369 aa25.44■■□□□ 1.66
TRIM11-202ENST00000366699 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
TRIM11-202ENST00000366699 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
TRIM11-202ENST00000366699 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
TRIM11-202ENST00000366699 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
TRIM11-202ENST00000366699 FGD6Q6ZV73 1430 aa25.36■■□□□ 1.65
TRIM11-202ENST00000366699 WDR62O43379 1518 aa25.36■■□□□ 1.65
TRIM11-202ENST00000366699 YTHDC1Q96MU7 727 aaKnown RBP25.35■■□□□ 1.65
TRIM11-202ENST00000366699 IQGAP2Q13576 1575 aa25.34■■□□□ 1.65
TRIM11-202ENST00000366699 CCDC18Q5T9S5 1454 aa25.33■■□□□ 1.65
TRIM11-202ENST00000366699 EHBP1L1Q8N3D4 1523 aa25.31■■□□□ 1.64
TRIM11-202ENST00000366699 MAPKBP1O60336 1514 aa25.31■■□□□ 1.64
TRIM11-202ENST00000366699 NCOA2Q15596 1464 aa25.28■■□□□ 1.64
TRIM11-202ENST00000366699 MYOM3Q5VTT5 1437 aa25.27■■□□□ 1.64
TRIM11-202ENST00000366699 SUPT6HQ7KZ85 1726 aaKnown RBP25.26■■□□□ 1.63
TRIM11-202ENST00000366699 HECW1Q76N89 1606 aa25.25■■□□□ 1.63
TRIM11-202ENST00000366699 ERCC6Q03468 1493 aa25.24■■□□□ 1.63
TRIM11-202ENST00000366699 UGGT2Q9NYU1 1516 aa25.23■■□□□ 1.63
TRIM11-202ENST00000366699 ZNF608Q9ULD9 1512 aaPredicted RBP25.23■■□□□ 1.63
TRIM11-202ENST00000366699 TIMELESSQ9UNS1 1208 aa25.23■■□□□ 1.63
TRIM11-202ENST00000366699 LRRIQ1Q96JM4 1722 aa25.23■■□□□ 1.63
TRIM11-202ENST00000366699 KIAA0586Q9BVV6 1533 aa25.19■■□□□ 1.62
TRIM11-202ENST00000366699 HFM1A2PYH4 1435 aa25.17■■□□□ 1.62
TRIM11-202ENST00000366699 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
TRIM11-202ENST00000366699 EPRSP07814 1512 aaKnown RBP25.16■■□□□ 1.62
TRIM11-202ENST00000366699 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
TRIM11-202ENST00000366699 EIF4G3O43432 1585 aaKnown RBP25.11■■□□□ 1.61
TRIM11-202ENST00000366699 MAGI3Q5TCQ9 1506 aa25.11■■□□□ 1.61
TRIM11-202ENST00000366699 PTPN23Q9H3S7 1636 aa25.1■■□□□ 1.61
TRIM11-202ENST00000366699 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
TRIM11-202ENST00000366699 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
TRIM11-202ENST00000366699 TCOF1Q13428 1488 aaKnown RBP25.08■■□□□ 1.61
TRIM11-202ENST00000366699 UACAQ9BZF9 1416 aa25.07■■□□□ 1.6
TRIM11-202ENST00000366699 SIN3AQ96ST3 1273 aa25.07■■□□□ 1.6
TRIM11-202ENST00000366699 MIA2Q96PC5 1412 aa25.06■■□□□ 1.6
TRIM11-202ENST00000366699 KIAA0556O60303 1618 aa25.06■■□□□ 1.6
TRIM11-202ENST00000366699 NAIPQ13075 1403 aa25.05■■□□□ 1.6
TRIM11-202ENST00000366699 DISP1Q96F81 1524 aa25.04■■□□□ 1.6
TRIM11-202ENST00000366699 CDK13Q14004 1512 aaKnown RBP25.02■■□□□ 1.6
TRIM11-202ENST00000366699 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
TRIM11-202ENST00000366699 SYNJ2O15056 1496 aa25.01■■□□□ 1.59
TRIM11-202ENST00000366699 CDK11AQ9UQ88 783 aaPredicted RBP25■■□□□ 1.59
TRIM11-202ENST00000366699 AKNAQ7Z591 1439 aa24.98■■□□□ 1.59
TRIM11-202ENST00000366699 PPP1R15AO75807 674 aaPredicted RBP24.95■■□□□ 1.58
TRIM11-202ENST00000366699 TONSLQ96HA7 1378 aa24.94■■□□□ 1.58
TRIM11-202ENST00000366699 RAPGEF6Q8TEU7 1601 aa24.93■■□□□ 1.58
TRIM11-202ENST00000366699 NUP153P49790 1475 aaKnown RBP24.92■■□□□ 1.58
TRIM11-202ENST00000366699 ARID3CA6NKF2 412 aa24.91■■□□□ 1.58
TRIM11-202ENST00000366699 CARMIL2Q6F5E8 1435 aa24.9■■□□□ 1.58
TRIM11-202ENST00000366699 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
TRIM11-202ENST00000366699 RRP7BPQ9NSQ0 103 aa24.88■■□□□ 1.57
TRIM11-202ENST00000366699 FBLN2P98095 1184 aa24.87■■□□□ 1.57
TRIM11-202ENST00000366699 CHIC2Q9UKJ5 165 aa24.87■■□□□ 1.57
TRIM11-202ENST00000366699 GCC2Q8IWJ2 1684 aa24.87■■□□□ 1.57
TRIM11-202ENST00000366699 NUP160Q12769 1436 aa24.86■■□□□ 1.57
TRIM11-202ENST00000366699 ROCK1Q13464 1354 aa24.83■■□□□ 1.56
TRIM11-202ENST00000366699 JPH4Q96JJ6 628 aa24.82■■□□□ 1.56
TRIM11-202ENST00000366699 TROQ12816 1431 aaPredicted RBP24.8■■□□□ 1.56
TRIM11-202ENST00000366699 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
TRIM11-202ENST00000366699 DAPK1P53355 1430 aa24.79■■□□□ 1.56
TRIM11-202ENST00000366699 DDX10Q13206 875 aaKnown RBP24.78■■□□□ 1.56
TRIM11-202ENST00000366699 PLB1Q6P1J6 1458 aa24.75■■□□□ 1.55
TRIM11-202ENST00000366699 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
TRIM11-202ENST00000366699 ABCC5O15440 1437 aa24.73■■□□□ 1.55
TRIM11-202ENST00000366699 PRG4Q92954 1404 aaPredicted RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms