RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
TRIM11-202ENST00000366699 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
TRIM11-202ENST00000366699 ZCCHC6Q5VYS8 1495 aaKnown RBP31.28■■■□□ 2.6
TRIM11-202ENST00000366699 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
TRIM11-202ENST00000366699 DCAF1Q9Y4B6 1507 aa30.59■■■□□ 2.49
TRIM11-202ENST00000366699 DCAF8L2P0C7V8 631 aa30.56■■■□□ 2.48
TRIM11-202ENST00000366699 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
TRIM11-202ENST00000366699 MYO15BQ96JP2 1530 aa29.89■■■□□ 2.38
TRIM11-202ENST00000366699 ABCC9O60706 1549 aa29.59■■■□□ 2.33
TRIM11-202ENST00000366699 NACADO15069 1562 aa29.48■■■□□ 2.31
TRIM11-202ENST00000366699 SCRIBQ14160 1630 aa29.47■■■□□ 2.31
TRIM11-202ENST00000366699 CHIC1Q5VXU3 224 aa29.4■■■□□ 2.3
TRIM11-202ENST00000366699 RSF1Q96T23 1441 aaPredicted RBP29.12■■■□□ 2.25
TRIM11-202ENST00000366699 RB1CC1Q8TDY2 1594 aa29.03■■■□□ 2.24
TRIM11-202ENST00000366699 CECR2Q9BXF3 1484 aa28.74■■■□□ 2.19
TRIM11-202ENST00000366699 MROH2BQ7Z745 1585 aa28.66■■■□□ 2.18
TRIM11-202ENST00000366699 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
TRIM11-202ENST00000366699 WIZO95785 1651 aa28.45■■■□□ 2.15
TRIM11-202ENST00000366699 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
TRIM11-202ENST00000366699 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
TRIM11-202ENST00000366699 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
TRIM11-202ENST00000366699 HRCP23327 699 aa28.32■■■□□ 2.12
TRIM11-202ENST00000366699 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
TRIM11-202ENST00000366699 SMARCA4P51532 1647 aa28.26■■■□□ 2.11
TRIM11-202ENST00000366699 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
TRIM11-202ENST00000366699 PABPN1Q86U42 306 aaKnown RBP eCLIP28.14■■■□□ 2.1
TRIM11-202ENST00000366699 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
TRIM11-202ENST00000366699 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
TRIM11-202ENST00000366699 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
TRIM11-202ENST00000366699 FAM9AQ8IZU1 332 aaPredicted RBP27.95■■■□□ 2.06
TRIM11-202ENST00000366699 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
TRIM11-202ENST00000366699 TRIM26Q12899 539 aaPredicted RBP27.92■■■□□ 2.06
TRIM11-202ENST00000366699 PEG3Q9GZU2 1588 aa27.85■■■□□ 2.05
TRIM11-202ENST00000366699 ABCC8Q09428 1581 aa27.64■■■□□ 2.02
TRIM11-202ENST00000366699 ATAD2BQ9ULI0 1458 aa27.63■■■□□ 2.01
TRIM11-202ENST00000366699 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
TRIM11-202ENST00000366699 BAZ1BQ9UIG0 1483 aaKnown RBP27.56■■■□□ 2
TRIM11-202ENST00000366699 PPARGC1BQ86YN6 1023 aaKnown RBP27.55■■■□□ 2
TRIM11-202ENST00000366699 EEA1Q15075 1411 aa27.49■■□□□ 1.99
TRIM11-202ENST00000366699 WRNQ14191 1432 aaPredicted RBP eCLIP27.42■■□□□ 1.98
TRIM11-202ENST00000366699 ZEB1P37275 1124 aaPredicted RBP27.36■■□□□ 1.97
TRIM11-202ENST00000366699 SOGA1O94964 1423 aa27.36■■□□□ 1.97
TRIM11-202ENST00000366699 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
TRIM11-202ENST00000366699 TNIKQ9UKE5 1360 aa27.24■■□□□ 1.95
TRIM11-202ENST00000366699 NCAPD3P42695 1498 aa27.24■■□□□ 1.95
TRIM11-202ENST00000366699 HMGXB3Q12766 1538 aa27.23■■□□□ 1.95
TRIM11-202ENST00000366699 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
TRIM11-202ENST00000366699 RUSC2Q8N2Y8 1516 aa27.17■■□□□ 1.94
TRIM11-202ENST00000366699 CEP162Q5TB80 1403 aa27.16■■□□□ 1.94
TRIM11-202ENST00000366699 GOLGA3Q08378 1498 aa27.14■■□□□ 1.94
TRIM11-202ENST00000366699 UBTFP17480 764 aaKnown RBP27.11■■□□□ 1.93
TRIM11-202ENST00000366699 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
TRIM11-202ENST00000366699 TOP2BQ02880 1626 aa27■■□□□ 1.91
TRIM11-202ENST00000366699 KIF21BO75037 1637 aa27■■□□□ 1.91
TRIM11-202ENST00000366699 BIVM-ERCC5R4GMW8 1640 aa26.91■■□□□ 1.9
TRIM11-202ENST00000366699 CFTRP13569 1480 aa26.89■■□□□ 1.9
TRIM11-202ENST00000366699 CLIP1P30622 1438 aa26.77■■□□□ 1.88
TRIM11-202ENST00000366699 RAPGEF2Q9Y4G8 1499 aa26.75■■□□□ 1.87
TRIM11-202ENST00000366699 CUX1P39880 1505 aa26.74■■□□□ 1.87
TRIM11-202ENST00000366699 CCER1Q8TC90 406 aaPredicted RBP26.68■■□□□ 1.86
TRIM11-202ENST00000366699 ERICH3Q5RHP9 1530 aa26.68■■□□□ 1.86
TRIM11-202ENST00000366699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.68■■□□□ 1.86
TRIM11-202ENST00000366699 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
TRIM11-202ENST00000366699 CC2D2AQ9P2K1 1620 aa26.66■■□□□ 1.86
TRIM11-202ENST00000366699 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
TRIM11-202ENST00000366699 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
TRIM11-202ENST00000366699 VPS8Q8N3P4 1428 aa26.64■■□□□ 1.85
TRIM11-202ENST00000366699 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
TRIM11-202ENST00000366699 TTBK1Q5TCY1 1321 aaPredicted RBP26.62■■□□□ 1.85
TRIM11-202ENST00000366699 APLP2Q06481 763 aa26.56■■□□□ 1.84
TRIM11-202ENST00000366699 RANGAP1P46060 587 aaPredicted RBP26.42■■□□□ 1.82
TRIM11-202ENST00000366699 CUX2O14529 1486 aa26.38■■□□□ 1.81
TRIM11-202ENST00000366699 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
TRIM11-202ENST00000366699 FGD5Q6ZNL6 1462 aa26.34■■□□□ 1.81
TRIM11-202ENST00000366699 ARAP1Q96P48 1450 aa26.32■■□□□ 1.8
TRIM11-202ENST00000366699 IGF1RP08069 1367 aa26.32■■□□□ 1.8
TRIM11-202ENST00000366699 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
TRIM11-202ENST00000366699 DNMBPQ6XZF7 1577 aa26.22■■□□□ 1.79
TRIM11-202ENST00000366699 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
TRIM11-202ENST00000366699 HNRNPUL2Q1KMD3 747 aaKnown RBP26.18■■□□□ 1.78
TRIM11-202ENST00000366699 ARHGAP35Q9NRY4 1499 aa26.18■■□□□ 1.78
TRIM11-202ENST00000366699 NESP48681 1621 aa26.15■■□□□ 1.78
TRIM11-202ENST00000366699 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.77
TRIM11-202ENST00000366699 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
TRIM11-202ENST00000366699 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
TRIM11-202ENST00000366699 DIEXFQ68CQ4 756 aaKnown RBP26.11■■□□□ 1.77
TRIM11-202ENST00000366699 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
TRIM11-202ENST00000366699 KANK4Q5T7N3 995 aaPredicted RBP26.04■■□□□ 1.76
TRIM11-202ENST00000366699 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
TRIM11-202ENST00000366699 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
TRIM11-202ENST00000366699 ZNF316A6NFI3 1004 aaPredicted RBP25.99■■□□□ 1.75
TRIM11-202ENST00000366699 RRBP1Q9P2E9 1410 aaKnown RBP25.97■■□□□ 1.75
TRIM11-202ENST00000366699 MAP3K1Q13233 1512 aa25.97■■□□□ 1.75
TRIM11-202ENST00000366699 FHAD1B1AJZ9 1412 aa25.95■■□□□ 1.74
TRIM11-202ENST00000366699 CUL7Q14999 1698 aa25.95■■□□□ 1.74
TRIM11-202ENST00000366699 SCAF1Q9H7N4 1312 aaKnown RBP25.93■■□□□ 1.74
TRIM11-202ENST00000366699 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
TRIM11-202ENST00000366699 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
TRIM11-202ENST00000366699 CCNB3Q8WWL7 1395 aa25.87■■□□□ 1.73
TRIM11-202ENST00000366699 TIAM1Q13009 1591 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms