RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 PRG4Q92954 1404 aaPredicted RBP40.6■■■■■ 4.09
SHC1-201ENST00000366442 CARMIL1Q5VZK9 1371 aa40.58■■■■■ 4.09
SHC1-201ENST00000366442 TRHP20396 242 aaPredicted RBP40.56■■■■■ 4.08
SHC1-201ENST00000366442 KIAA0586Q9BVV6 1533 aa40.55■■■■■ 4.08
SHC1-201ENST00000366442 RAPGEF2Q9Y4G8 1499 aa40.28■■■■■ 4.04
SHC1-201ENST00000366442 IQGAP2Q13576 1575 aa40.22■■■■■ 4.03
SHC1-201ENST00000366442 CARMIL2Q6F5E8 1435 aa40.13■■■■■ 4.01
SHC1-201ENST00000366442 ADCY10Q96PN6 1610 aa40.07■■■■■ 4.01
SHC1-201ENST00000366442 PTPRGP23470 1445 aa40.05■■■■■ 4
SHC1-201ENST00000366442 TNIKQ9UKE5 1360 aa40.03■■■■■ 4
SHC1-201ENST00000366442 NPM1P06748 294 aaKnown RBP eCLIP40.02■■■■■ 4
SHC1-201ENST00000366442 PRXQ9BXM0 1461 aa40.01■■■■■ 4
SHC1-201ENST00000366442 UGGT2Q9NYU1 1516 aa40.01■■■■□ 3.99
SHC1-201ENST00000366442 DISP1Q96F81 1524 aa39.98■■■■□ 3.99
SHC1-201ENST00000366442 MAPKBP1O60336 1514 aa39.97■■■■□ 3.99
SHC1-201ENST00000366442 CTTNBP2Q8WZ74 1663 aa39.91■■■■□ 3.98
SHC1-201ENST00000366442 KIF13AQ9H1H9 1805 aa39.9■■■■□ 3.98
SHC1-201ENST00000366442 ABCC10Q5T3U5 1492 aa39.85■■■■□ 3.97
SHC1-201ENST00000366442 KIAA0556O60303 1618 aa39.84■■■■□ 3.97
SHC1-201ENST00000366442 TTBK1Q5TCY1 1321 aaPredicted RBP39.84■■■■□ 3.97
SHC1-201ENST00000366442 CSRNP3Q8WYN3 585 aa39.8■■■■□ 3.96
SHC1-201ENST00000366442 UHRF1BP1LA0JNW5 1464 aa39.8■■■■□ 3.96
SHC1-201ENST00000366442 EEA1Q15075 1411 aa39.79■■■■□ 3.96
SHC1-201ENST00000366442 ABCC2Q92887 1545 aa39.79■■■■□ 3.96
SHC1-201ENST00000366442 UACAQ9BZF9 1416 aa39.77■■■■□ 3.96
SHC1-201ENST00000366442 DIP2BQ9P265 1576 aa39.75■■■■□ 3.95
SHC1-201ENST00000366442 FAM69CQ0P6D2 419 aa39.74■■■■□ 3.95
SHC1-201ENST00000366442 GOLGA3Q08378 1498 aa39.73■■■■□ 3.95
SHC1-201ENST00000366442 KDM5BQ9UGL1 1544 aa39.6■■■■□ 3.93
SHC1-201ENST00000366442 PLB1Q6P1J6 1458 aa39.58■■■■□ 3.93
SHC1-201ENST00000366442 ASXL2Q76L83 1435 aa39.57■■■■□ 3.93
SHC1-201ENST00000366442 CHIC1Q5VXU3 224 aa39.49■■■■□ 3.91
SHC1-201ENST00000366442 ZCCHC11Q5TAX3 1644 aaKnown RBP39.48■■■■□ 3.91
SHC1-201ENST00000366442 ABCA8O94911 1581 aa39.45■■■■□ 3.91
SHC1-201ENST00000366442 GLI2P10070 1586 aa39.45■■■■□ 3.91
SHC1-201ENST00000366442 FAM9AQ8IZU1 332 aaPredicted RBP39.44■■■■□ 3.9
SHC1-201ENST00000366442 KIF21BO75037 1637 aa39.4■■■■□ 3.9
SHC1-201ENST00000366442 SAMD9Q5K651 1589 aa39.39■■■■□ 3.9
SHC1-201ENST00000366442 TSPOAP1O95153 1857 aa39.38■■■■□ 3.89
SHC1-201ENST00000366442 EPRSP07814 1512 aaKnown RBP39.35■■■■□ 3.89
SHC1-201ENST00000366442 P3H3Q8IVL6 736 aa39.3■■■■□ 3.88
SHC1-201ENST00000366442 WDR7Q9Y4E6 1490 aa39.3■■■■□ 3.88
SHC1-201ENST00000366442 KDM6BO15054 1643 aa39.25■■■■□ 3.87
SHC1-201ENST00000366442 PPRC1Q5VV67 1664 aaKnown RBP39.24■■■■□ 3.87
SHC1-201ENST00000366442 MAP3K4Q9Y6R4 1608 aa39.22■■■■□ 3.87
SHC1-201ENST00000366442 EFCAB5A4FU69 1503 aa39.13■■■■□ 3.85
SHC1-201ENST00000366442 RAPGEF6Q8TEU7 1601 aa39.12■■■■□ 3.85
SHC1-201ENST00000366442 ATP10BO94823 1461 aa39.11■■■■□ 3.85
SHC1-201ENST00000366442 RANGAP1P46060 587 aaPredicted RBP39.11■■■■□ 3.85
SHC1-201ENST00000366442 TEX14Q8IWB6 1497 aa39.11■■■■□ 3.85
SHC1-201ENST00000366442 FHOD3Q2V2M9 1422 aa39.09■■■■□ 3.85
SHC1-201ENST00000366442 KCNH8Q96L42 1107 aa39.03■■■■□ 3.84
SHC1-201ENST00000366442 CFAP43Q8NDM7 1665 aa39.03■■■■□ 3.84
SHC1-201ENST00000366442 UBTFP17480 764 aaKnown RBP39.02■■■■□ 3.84
SHC1-201ENST00000366442 ARID3CA6NKF2 412 aa39.01■■■■□ 3.84
SHC1-201ENST00000366442 NUP153P49790 1475 aaKnown RBP38.98■■■■□ 3.83
SHC1-201ENST00000366442 CD109Q6YHK3 1445 aa38.98■■■■□ 3.83
SHC1-201ENST00000366442 MAGI3Q5TCQ9 1506 aa38.97■■■■□ 3.83
SHC1-201ENST00000366442 AEBP2Q6ZN18 517 aaPredicted RBP38.96■■■■□ 3.83
SHC1-201ENST00000366442 EHMT2Q96KQ7 1210 aa38.93■■■■□ 3.82
SHC1-201ENST00000366442 COL17A1Q9UMD9 1497 aaPredicted RBP38.92■■■■□ 3.82
SHC1-201ENST00000366442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.85■■■■□ 3.81
SHC1-201ENST00000366442 HNRNPUL2Q1KMD3 747 aaKnown RBP38.85■■■■□ 3.81
SHC1-201ENST00000366442 ABCA9Q8IUA7 1624 aa38.83■■■■□ 3.81
SHC1-201ENST00000366442 ARHGAP35Q9NRY4 1499 aa38.8■■■■□ 3.8
SHC1-201ENST00000366442 FMN1Q68DA7 1419 aa38.77■■■■□ 3.8
SHC1-201ENST00000366442 PLEKHD1A6NEE1 506 aa38.72■■■■□ 3.79
SHC1-201ENST00000366442 PHLDB1Q86UU1 1377 aa38.67■■■■□ 3.78
SHC1-201ENST00000366442 ARAP3Q8WWN8 1544 aa38.65■■■■□ 3.78
SHC1-201ENST00000366442 HECW1Q76N89 1606 aa38.63■■■■□ 3.77
SHC1-201ENST00000366442 KDM4FA0A1W2PPD8 638 aa38.61■■■■□ 3.77
SHC1-201ENST00000366442 CDK13Q14004 1512 aaKnown RBP38.61■■■■□ 3.77
SHC1-201ENST00000366442 NEO1Q92859 1461 aa38.6■■■■□ 3.77
SHC1-201ENST00000366442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.53■■■■□ 3.76
SHC1-201ENST00000366442 ATP1B4Q9UN42 357 aaPredicted RBP38.51■■■■□ 3.76
SHC1-201ENST00000366442 TTC37Q6PGP7 1564 aa38.45■■■■□ 3.75
SHC1-201ENST00000366442 CDK11AQ9UQ88 783 aaPredicted RBP38.45■■■■□ 3.75
SHC1-201ENST00000366442 ADGRL1O94910 1474 aa38.44■■■■□ 3.74
SHC1-201ENST00000366442 CFAP74Q9C0B2 1584 aa38.4■■■■□ 3.74
SHC1-201ENST00000366442 CASKIN1Q8WXD9 1431 aa38.39■■■■□ 3.74
SHC1-201ENST00000366442 FANCAO15360 1455 aa38.38■■■■□ 3.73
SHC1-201ENST00000366442 CLIP1P30622 1438 aa38.38■■■■□ 3.73
SHC1-201ENST00000366442 LRRIQ1Q96JM4 1722 aa38.36■■■■□ 3.73
SHC1-201ENST00000366442 RAPGEF3O95398 923 aa38.36■■■■□ 3.73
SHC1-201ENST00000366442 AKNAQ7Z591 1439 aa38.35■■■■□ 3.73
SHC1-201ENST00000366442 PCF11O94913 1555 aaKnown RBP38.34■■■■□ 3.73
SHC1-201ENST00000366442 TROQ12816 1431 aaPredicted RBP38.33■■■■□ 3.73
SHC1-201ENST00000366442 FRMPD1Q5SYB0 1578 aa38.32■■■■□ 3.73
SHC1-201ENST00000366442 PLCH2O75038 1416 aa38.31■■■■□ 3.72
SHC1-201ENST00000366442 CCDC18Q5T9S5 1454 aa38.31■■■■□ 3.72
SHC1-201ENST00000366442 DENND4BO75064 1496 aaPredicted RBP38.28■■■■□ 3.72
SHC1-201ENST00000366442 KIF14Q15058 1648 aa38.28■■■■□ 3.72
SHC1-201ENST00000366442 FYCO1Q9BQS8 1478 aa38.28■■■■□ 3.72
SHC1-201ENST00000366442 RICTORQ6R327 1708 aa38.24■■■■□ 3.71
SHC1-201ENST00000366442 MYO5CQ9NQX4 1742 aa38.22■■■■□ 3.71
SHC1-201ENST00000366442 EFCAB2Q5VUJ9 269 aa38.15■■■■□ 3.7
SHC1-201ENST00000366442 ZMYM4Q5VZL5 1548 aa38.13■■■■□ 3.69
SHC1-201ENST00000366442 ARHGEF40Q8TER5 1519 aa38.12■■■■□ 3.69
SHC1-201ENST00000366442 SCAPERQ9BY12 1400 aa38.1■■■■□ 3.69
SHC1-201ENST00000366442 POGZQ7Z3K3 1410 aa38.08■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms