RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 PPP1R15AO75807 674 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-201ENST00000360299 CARMIL2Q6F5E8 1435 aa9.95□□□□□ -0.82
RAB5B-201ENST00000360299 PEG3Q9GZU2 1588 aa9.94□□□□□ -0.82
RAB5B-201ENST00000360299 FAM69CQ0P6D2 419 aa9.94□□□□□ -0.82
RAB5B-201ENST00000360299 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
RAB5B-201ENST00000360299 CHIC2Q9UKJ5 165 aa9.93□□□□□ -0.82
RAB5B-201ENST00000360299 MTUS2Q5JR59 1369 aa9.92□□□□□ -0.82
RAB5B-201ENST00000360299 JPH4Q96JJ6 628 aa9.92□□□□□ -0.82
RAB5B-201ENST00000360299 CARMIL1Q5VZK9 1371 aa9.92□□□□□ -0.82
RAB5B-201ENST00000360299 DIEXFQ68CQ4 756 aaKnown RBP9.91□□□□□ -0.82
RAB5B-201ENST00000360299 RUSC2Q8N2Y8 1516 aa9.91□□□□□ -0.82
RAB5B-201ENST00000360299 MRC2Q9UBG0 1479 aa9.9□□□□□ -0.83
RAB5B-201ENST00000360299 GOLGA3Q08378 1498 aa9.89□□□□□ -0.83
RAB5B-201ENST00000360299 ERICH6Q7L0X2 663 aa9.88□□□□□ -0.83
RAB5B-201ENST00000360299 CLIP1P30622 1438 aa9.88□□□□□ -0.83
RAB5B-201ENST00000360299 AQRO60306 1485 aaKnown RBP eCLIP9.87□□□□□ -0.837e-8■■■■■ 33.4
RAB5B-201ENST00000360299 NEUROD1Q13562 356 aa9.87□□□□□ -0.83
RAB5B-201ENST00000360299 CFDP1Q9UEE9 299 aaPredicted RBP9.87□□□□□ -0.83
RAB5B-201ENST00000360299 A0A0G2JS52 829 aa9.85□□□□□ -0.83
RAB5B-201ENST00000360299 HAP1P54257 671 aaPredicted RBP9.84□□□□□ -0.83
RAB5B-201ENST00000360299 TNIKQ9UKE5 1360 aa9.84□□□□□ -0.83
RAB5B-201ENST00000360299 ACIN1Q9UKV3 1341 aaKnown RBP9.84□□□□□ -0.83
RAB5B-201ENST00000360299 SYNJ1O43426 1573 aa9.84□□□□□ -0.83
RAB5B-201ENST00000360299 ZNF316A6NFI3 1004 aaPredicted RBP9.83□□□□□ -0.84
RAB5B-201ENST00000360299 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
RAB5B-201ENST00000360299 RAD54L2Q9Y4B4 1467 aa9.82□□□□□ -0.84
RAB5B-201ENST00000360299 GGT6Q6P531 493 aa9.81□□□□□ -0.84
RAB5B-201ENST00000360299 PTPRGP23470 1445 aa9.8□□□□□ -0.84
RAB5B-201ENST00000360299 CEP162Q5TB80 1403 aa9.8□□□□□ -0.84
RAB5B-201ENST00000360299 ANP32CO43423 234 aa9.79□□□□□ -0.84
RAB5B-201ENST00000360299 ZBTB7CA1YPR0 619 aa9.78□□□□□ -0.84
RAB5B-201ENST00000360299 GAPVD1Q14C86 1478 aa9.77□□□□□ -0.84
RAB5B-201ENST00000360299 MYT1Q01538 1121 aa9.77□□□□□ -0.85
RAB5B-201ENST00000360299 FGD5Q6ZNL6 1462 aa9.76□□□□□ -0.85
RAB5B-201ENST00000360299 IFT140Q96RY7 1462 aa9.75□□□□□ -0.85
RAB5B-201ENST00000360299 EFCAB2Q5VUJ9 269 aa9.75□□□□□ -0.85
RAB5B-201ENST00000360299 LMOD2Q6P5Q4 547 aa9.74□□□□□ -0.85
RAB5B-201ENST00000360299 TONSLQ96HA7 1378 aa9.73□□□□□ -0.85
RAB5B-201ENST00000360299 RRP7BPQ9NSQ0 103 aa9.73□□□□□ -0.85
RAB5B-201ENST00000360299 HMGXB3Q12766 1538 aa9.73□□□□□ -0.85
RAB5B-201ENST00000360299 CCNB3Q8WWL7 1395 aa9.73□□□□□ -0.85
RAB5B-201ENST00000360299 GRIN2BQ13224 1484 aa9.7□□□□□ -0.86
RAB5B-201ENST00000360299 FHAD1B1AJZ9 1412 aa9.7□□□□□ -0.86
RAB5B-201ENST00000360299 TOP2BQ02880 1626 aa9.69□□□□□ -0.86
RAB5B-201ENST00000360299 LAMC3Q9Y6N6 1575 aa9.68□□□□□ -0.86
RAB5B-201ENST00000360299 KIF21BO75037 1637 aa9.68□□□□□ -0.86
RAB5B-201ENST00000360299 KDM2AQ9Y2K7 1162 aa9.68□□□□□ -0.86
RAB5B-201ENST00000360299 CFTRP13569 1480 aa9.68□□□□□ -0.86
RAB5B-201ENST00000360299 PRG4Q92954 1404 aaPredicted RBP9.68□□□□□ -0.86
RAB5B-201ENST00000360299 SNAPC4Q5SXM2 1469 aa9.67□□□□□ -0.86
RAB5B-201ENST00000360299 RAPGEF2Q9Y4G8 1499 aa9.67□□□□□ -0.86
RAB5B-201ENST00000360299 HDGFP51858 240 aaKnown RBP9.66□□□□□ -0.86
RAB5B-201ENST00000360299 BIVM-ERCC5R4GMW8 1640 aa9.66□□□□□ -0.86
RAB5B-201ENST00000360299 KANK1Q14678 1352 aa9.65□□□□□ -0.86
RAB5B-201ENST00000360299 RGL3Q3MIN7 710 aa9.65□□□□□ -0.86
RAB5B-201ENST00000360299 DAXXQ9UER7 740 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-201ENST00000360299 TOPBP1Q92547 1522 aa9.64□□□□□ -0.87
RAB5B-201ENST00000360299 CUX1P39880 1505 aa9.64□□□□□ -0.87
RAB5B-201ENST00000360299 KIF3BO15066 747 aa9.63□□□□□ -0.87
RAB5B-201ENST00000360299 SPAG9O60271 1321 aaKnown RBP9.62□□□□□ -0.87
RAB5B-201ENST00000360299 EID1Q9Y6B2 187 aa9.62□□□□□ -0.87
RAB5B-201ENST00000360299 CLSPNQ9HAW4 1339 aa9.62□□□□□ -0.87
RAB5B-201ENST00000360299 HNRNPMP52272 730 aaKnown RBP eCLIP9.62□□□□□ -0.87
RAB5B-201ENST00000360299 PHF23Q9BUL5 403 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-201ENST00000360299 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
RAB5B-201ENST00000360299 WASHC2CQ9Y4E1 1318 aa9.61□□□□□ -0.87
RAB5B-201ENST00000360299 FHOD3Q2V2M9 1422 aa9.59□□□□□ -0.87
RAB5B-201ENST00000360299 NEFMP07197 916 aa9.59□□□□□ -0.87
RAB5B-201ENST00000360299 VPS8Q8N3P4 1428 aa9.59□□□□□ -0.87
RAB5B-201ENST00000360299 POGKQ9P215 609 aa9.58□□□□□ -0.88
RAB5B-201ENST00000360299 CCDC9Q9Y3X0 531 aaKnown RBP9.58□□□□□ -0.88
RAB5B-201ENST00000360299 POLA1P09884 1462 aaPredicted RBP9.58□□□□□ -0.88
RAB5B-201ENST00000360299 MEX3CQ5U5Q3 659 aaKnown RBP9.57□□□□□ -0.88
RAB5B-201ENST00000360299 PRXQ9BXM0 1461 aa9.56□□□□□ -0.88
RAB5B-201ENST00000360299 FMN1Q68DA7 1419 aa9.55□□□□□ -0.88
RAB5B-201ENST00000360299 ZNF608Q9ULD9 1512 aaPredicted RBP9.54□□□□□ -0.88
RAB5B-201ENST00000360299 PRDM2Q13029 1718 aa9.54□□□□□ -0.88
RAB5B-201ENST00000360299 DNMBPQ6XZF7 1577 aa9.53□□□□□ -0.88
RAB5B-201ENST00000360299 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
RAB5B-201ENST00000360299 IGF1RP08069 1367 aa9.53□□□□□ -0.88
RAB5B-201ENST00000360299 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
RAB5B-201ENST00000360299 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.88
RAB5B-201ENST00000360299 ERICH3Q5RHP9 1530 aa9.52□□□□□ -0.88
RAB5B-201ENST00000360299 ARAP1Q96P48 1450 aa9.52□□□□□ -0.89
RAB5B-201ENST00000360299 SAFB2Q14151 953 aaKnown RBP eCLIP9.52□□□□□ -0.89
RAB5B-201ENST00000360299 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
RAB5B-201ENST00000360299 STK26Q9P289 416 aa9.52□□□□□ -0.89
RAB5B-201ENST00000360299 DDX10Q13206 875 aaKnown RBP9.51□□□□□ -0.89
RAB5B-201ENST00000360299 NPM2Q86SE8 214 aaKnown RBP9.51□□□□□ -0.89
RAB5B-201ENST00000360299 GTF3C3Q9Y5Q9 886 aa9.51□□□□□ -0.89
RAB5B-201ENST00000360299 URB2Q14146 1524 aaKnown RBP9.5□□□□□ -0.89
RAB5B-201ENST00000360299 RAPGEF3O95398 923 aa9.5□□□□□ -0.89
RAB5B-201ENST00000360299 PIP4K2BP78356 416 aa9.5□□□□□ -0.89
RAB5B-201ENST00000360299 SYNJ2O15056 1496 aa9.5□□□□□ -0.89
RAB5B-201ENST00000360299 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
RAB5B-201ENST00000360299 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
RAB5B-201ENST00000360299 SOX12O15370 315 aa9.47□□□□□ -0.89
RAB5B-201ENST00000360299 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
RAB5B-201ENST00000360299 CCDC18Q5T9S5 1454 aa9.46□□□□□ -0.89
RAB5B-201ENST00000360299 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms