RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 CUL7Q14999 1698 aa40.76■■■■■ 4.12
YIF1A-201ENST00000359461 KIF27Q86VH2 1401 aa40.67■■■■■ 4.1
YIF1A-201ENST00000359461 IGF1RP08069 1367 aa40.66■■■■■ 4.1
YIF1A-201ENST00000359461 KIAA0586Q9BVV6 1533 aa40.66■■■■■ 4.1
YIF1A-201ENST00000359461 ADCY10Q96PN6 1610 aa40.61■■■■■ 4.09
YIF1A-201ENST00000359461 MAPKBP1O60336 1514 aa40.6■■■■■ 4.09
YIF1A-201ENST00000359461 ABCC10Q5T3U5 1492 aa40.52■■■■■ 4.08
YIF1A-201ENST00000359461 DIP2BQ9P265 1576 aa40.49■■■■■ 4.07
YIF1A-201ENST00000359461 AEBP2Q6ZN18 517 aaPredicted RBP40.47■■■■■ 4.07
YIF1A-201ENST00000359461 CARMIL1Q5VZK9 1371 aa40.37■■■■■ 4.05
YIF1A-201ENST00000359461 NPM1P06748 294 aaKnown RBP eCLIP40.37■■■■■ 4.05
YIF1A-201ENST00000359461 FAM69CQ0P6D2 419 aa40.33■■■■■ 4.05
YIF1A-201ENST00000359461 IQGAP2Q13576 1575 aa40.29■■■■■ 4.04
YIF1A-201ENST00000359461 PTPRGP23470 1445 aa40.23■■■■■ 4.03
YIF1A-201ENST00000359461 CARMIL2Q6F5E8 1435 aa40.2■■■■■ 4.03
YIF1A-201ENST00000359461 TNIKQ9UKE5 1360 aa40.18■■■■■ 4.02
YIF1A-201ENST00000359461 TSPOAP1O95153 1857 aa40.16■■■■■ 4.02
YIF1A-201ENST00000359461 ABCC2Q92887 1545 aa40.15■■■■■ 4.02
YIF1A-201ENST00000359461 KDM6BO15054 1643 aa40.13■■■■■ 4.02
YIF1A-201ENST00000359461 DISP1Q96F81 1524 aa40.1■■■■■ 4.01
YIF1A-201ENST00000359461 UHRF1BP1LA0JNW5 1464 aa40.07■■■■■ 4.01
YIF1A-201ENST00000359461 RAPGEF2Q9Y4G8 1499 aa40.04■■■■■ 4
YIF1A-201ENST00000359461 UGGT2Q9NYU1 1516 aa40.04■■■■■ 4
YIF1A-201ENST00000359461 GLI2P10070 1586 aa40■■■■□ 3.99
YIF1A-201ENST00000359461 PPRC1Q5VV67 1664 aaKnown RBP39.98■■■■□ 3.99
YIF1A-201ENST00000359461 PLB1Q6P1J6 1458 aa39.97■■■■□ 3.99
YIF1A-201ENST00000359461 ASXL2Q76L83 1435 aa39.97■■■■□ 3.99
YIF1A-201ENST00000359461 UACAQ9BZF9 1416 aa39.96■■■■□ 3.99
YIF1A-201ENST00000359461 KIAA0556O60303 1618 aa39.94■■■■□ 3.99
YIF1A-201ENST00000359461 TTBK1Q5TCY1 1321 aaPredicted RBP39.94■■■■□ 3.98
YIF1A-201ENST00000359461 KDM5BQ9UGL1 1544 aa39.9■■■■□ 3.98
YIF1A-201ENST00000359461 CTTNBP2Q8WZ74 1663 aa39.89■■■■□ 3.98
YIF1A-201ENST00000359461 ZCCHC11Q5TAX3 1644 aaKnown RBP39.84■■■■□ 3.97
YIF1A-201ENST00000359461 MAP3K4Q9Y6R4 1608 aa39.8■■■■□ 3.96
YIF1A-201ENST00000359461 EPRSP07814 1512 aaKnown RBP39.77■■■■□ 3.96
YIF1A-201ENST00000359461 KDM4FA0A1W2PPD8 638 aa39.69■■■■□ 3.94
YIF1A-201ENST00000359461 PRXQ9BXM0 1461 aa39.63■■■■□ 3.94
YIF1A-201ENST00000359461 GOLGA3Q08378 1498 aa39.62■■■■□ 3.93
YIF1A-201ENST00000359461 ABCA8O94911 1581 aa39.59■■■■□ 3.93
YIF1A-201ENST00000359461 TEX14Q8IWB6 1497 aa39.59■■■■□ 3.93
YIF1A-201ENST00000359461 WDR7Q9Y4E6 1490 aa39.59■■■■□ 3.93
YIF1A-201ENST00000359461 COL17A1Q9UMD9 1497 aaPredicted RBP39.58■■■■□ 3.93
YIF1A-201ENST00000359461 CFAP43Q8NDM7 1665 aa39.48■■■■□ 3.91
YIF1A-201ENST00000359461 ADGRL1O94910 1474 aa39.42■■■■□ 3.9
YIF1A-201ENST00000359461 MAGI3Q5TCQ9 1506 aa39.38■■■■□ 3.89
YIF1A-201ENST00000359461 CD109Q6YHK3 1445 aa39.3■■■■□ 3.88
YIF1A-201ENST00000359461 SAMD9Q5K651 1589 aa39.28■■■■□ 3.88
YIF1A-201ENST00000359461 KCNH8Q96L42 1107 aa39.17■■■■□ 3.86
YIF1A-201ENST00000359461 ATP10BO94823 1461 aa39.17■■■■□ 3.86
YIF1A-201ENST00000359461 ABCA9Q8IUA7 1624 aa39.13■■■■□ 3.85
YIF1A-201ENST00000359461 RAPGEF6Q8TEU7 1601 aa39.12■■■■□ 3.85
YIF1A-201ENST00000359461 CSRNP3Q8WYN3 585 aa39.11■■■■□ 3.85
YIF1A-201ENST00000359461 ARAP3Q8WWN8 1544 aa39.09■■■■□ 3.85
YIF1A-201ENST00000359461 P3H3Q8IVL6 736 aa39.06■■■■□ 3.84
YIF1A-201ENST00000359461 EEA1Q15075 1411 aa39.05■■■■□ 3.84
YIF1A-201ENST00000359461 FAM9AQ8IZU1 332 aaPredicted RBP39.02■■■■□ 3.84
YIF1A-201ENST00000359461 KIF21BO75037 1637 aa39.02■■■■□ 3.84
YIF1A-201ENST00000359461 ARID3CA6NKF2 412 aa38.98■■■■□ 3.83
YIF1A-201ENST00000359461 HECW2Q9P2P5 1572 aa38.98■■■■□ 3.83
YIF1A-201ENST00000359461 NUP153P49790 1475 aaKnown RBP38.94■■■■□ 3.82
YIF1A-201ENST00000359461 PHLDB1Q86UU1 1377 aa38.92■■■■□ 3.82
YIF1A-201ENST00000359461 NEO1Q92859 1461 aa38.87■■■■□ 3.81
YIF1A-201ENST00000359461 FHOD3Q2V2M9 1422 aa38.85■■■■□ 3.81
YIF1A-201ENST00000359461 FRMPD1Q5SYB0 1578 aa38.82■■■■□ 3.8
YIF1A-201ENST00000359461 EFCAB5A4FU69 1503 aa38.81■■■■□ 3.8
YIF1A-201ENST00000359461 ADAMTSL3P82987 1691 aa38.75■■■■□ 3.79
YIF1A-201ENST00000359461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.69■■■■□ 3.78
YIF1A-201ENST00000359461 HNRNPUL2Q1KMD3 747 aaKnown RBP38.69■■■■□ 3.78
YIF1A-201ENST00000359461 RICTORQ6R327 1708 aa38.67■■■■□ 3.78
YIF1A-201ENST00000359461 RAPGEF3O95398 923 aa38.67■■■■□ 3.78
YIF1A-201ENST00000359461 CFAP74Q9C0B2 1584 aa38.65■■■■□ 3.78
YIF1A-201ENST00000359461 RANGAP1P46060 587 aaPredicted RBP38.65■■■■□ 3.78
YIF1A-201ENST00000359461 BCORL1Q5H9F3 1711 aa38.64■■■■□ 3.78
YIF1A-201ENST00000359461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.63■■■■□ 3.781e-7■■■■□ 23.3
YIF1A-201ENST00000359461 ILDR1Q86SU0 546 aaPredicted RBP38.62■■■■□ 3.77
YIF1A-201ENST00000359461 ARHGEF40Q8TER5 1519 aa38.62■■■■□ 3.77
YIF1A-201ENST00000359461 TTC37Q6PGP7 1564 aa38.61■■■■□ 3.77
YIF1A-201ENST00000359461 PTPRMP28827 1452 aa38.58■■■■□ 3.77
YIF1A-201ENST00000359461 PLEKHD1A6NEE1 506 aa38.57■■■■□ 3.76
YIF1A-201ENST00000359461 FANCAO15360 1455 aa38.54■■■■□ 3.76
YIF1A-201ENST00000359461 DENND4BO75064 1496 aaPredicted RBP38.54■■■■□ 3.76
YIF1A-201ENST00000359461 MADDQ8WXG6 1647 aa38.53■■■■□ 3.76
YIF1A-201ENST00000359461 AKNAQ7Z591 1439 aa38.52■■■■□ 3.76
YIF1A-201ENST00000359461 CDK13Q14004 1512 aaKnown RBP38.52■■■■□ 3.76
YIF1A-201ENST00000359461 ZMYM4Q5VZL5 1548 aa38.51■■■■□ 3.76
YIF1A-201ENST00000359461 HECW1Q76N89 1606 aa38.43■■■■□ 3.74
YIF1A-201ENST00000359461 SIGLEC1Q9BZZ2 1709 aa38.39■■■■□ 3.74
YIF1A-201ENST00000359461 ARHGAP35Q9NRY4 1499 aa38.38■■■■□ 3.73
YIF1A-201ENST00000359461 RIMS1Q86UR5 1692 aaKnown RBP38.38■■■■□ 3.73
YIF1A-201ENST00000359461 FMN1Q68DA7 1419 aa38.38■■■■□ 3.73
YIF1A-201ENST00000359461 ZFYVE16Q7Z3T8 1539 aa38.36■■■■□ 3.73
YIF1A-201ENST00000359461 MYO5CQ9NQX4 1742 aa38.35■■■■□ 3.73
YIF1A-201ENST00000359461 ARID4BQ4LE39 1312 aaPredicted RBP38.34■■■■□ 3.73
YIF1A-201ENST00000359461 MAGI2Q86UL8 1455 aa38.34■■■■□ 3.73
YIF1A-201ENST00000359461 PCF11O94913 1555 aaKnown RBP38.33■■■■□ 3.73
YIF1A-201ENST00000359461 PLCH2O75038 1416 aa38.33■■■■□ 3.73
YIF1A-201ENST00000359461 YEATS2Q9ULM3 1422 aa38.29■■■■□ 3.72
YIF1A-201ENST00000359461 POGZQ7Z3K3 1410 aa38.29■■■■□ 3.72
YIF1A-201ENST00000359461 LRRIQ1Q96JM4 1722 aa38.27■■■■□ 3.72
YIF1A-201ENST00000359461 LMTK3Q96Q04 1460 aa38.27■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms