RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
APP-205ENST00000358918 PDS5BQ9NTI5 1447 aa20.65■□□□□ 0.9
APP-205ENST00000358918 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
APP-205ENST00000358918 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
APP-205ENST00000358918 ABCA10Q8WWZ4 1543 aa20.62■□□□□ 0.89
APP-205ENST00000358918 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
APP-205ENST00000358918 BCANQ96GW7 911 aa20.56■□□□□ 0.88
APP-205ENST00000358918 ARHGAP35Q9NRY4 1499 aa20.54■□□□□ 0.88
APP-205ENST00000358918 FKBP8Q14318 412 aa20.52■□□□□ 0.88
APP-205ENST00000358918 KCNH8Q96L42 1107 aa20.49■□□□□ 0.87
APP-205ENST00000358918 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
APP-205ENST00000358918 WDR97A6NE52 1622 aa20.46■□□□□ 0.87
APP-205ENST00000358918 RBM19Q9Y4C8 960 aaKnown RBP20.45■□□□□ 0.86
APP-205ENST00000358918 NEFLP07196 543 aa20.45■□□□□ 0.86
APP-205ENST00000358918 RRBP1Q9P2E9 1410 aaKnown RBP20.44■□□□□ 0.86
APP-205ENST00000358918 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
APP-205ENST00000358918 CUL7Q14999 1698 aa20.42■□□□□ 0.86
APP-205ENST00000358918 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
APP-205ENST00000358918 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.85
APP-205ENST00000358918 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
APP-205ENST00000358918 MRC2Q9UBG0 1479 aa20.35■□□□□ 0.85
APP-205ENST00000358918 TARBP1Q13395 1621 aaKnown RBP20.34■□□□□ 0.85
APP-205ENST00000358918 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
APP-205ENST00000358918 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
APP-205ENST00000358918 CTTNBP2Q8WZ74 1663 aa20.28■□□□□ 0.84
APP-205ENST00000358918 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.84
APP-205ENST00000358918 MAPKBP1O60336 1514 aa20.27■□□□□ 0.84
APP-205ENST00000358918 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.83
APP-205ENST00000358918 RAB3GAP2Q9H2M9 1393 aa20.25■□□□□ 0.83
APP-205ENST00000358918 ITGAEP38570 1179 aa20.25■□□□□ 0.83
APP-205ENST00000358918 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
APP-205ENST00000358918 CCER2I3L3R5 266 aa20.24■□□□□ 0.83
APP-205ENST00000358918 ATP1B4Q9UN42 357 aaPredicted RBP20.24■□□□□ 0.83
APP-205ENST00000358918 EFCAB5A4FU69 1503 aa20.22■□□□□ 0.83
APP-205ENST00000358918 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
APP-205ENST00000358918 MSH5O43196 834 aa20.22■□□□□ 0.83
APP-205ENST00000358918 TIAM1Q13009 1591 aa20.22■□□□□ 0.83
APP-205ENST00000358918 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
APP-205ENST00000358918 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
APP-205ENST00000358918 WDR62O43379 1518 aa20.2■□□□□ 0.82
APP-205ENST00000358918 TRIM52Q96A61 297 aa20.2■□□□□ 0.82
APP-205ENST00000358918 PBRM1Q86U86 1689 aa20.2■□□□□ 0.82
APP-205ENST00000358918 ANP32CO43423 234 aa20.18■□□□□ 0.82
APP-205ENST00000358918 MAP3K1Q13233 1512 aa20.18■□□□□ 0.82
APP-205ENST00000358918 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
APP-205ENST00000358918 ERICH6Q7L0X2 663 aa20.17■□□□□ 0.82
APP-205ENST00000358918 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
APP-205ENST00000358918 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
APP-205ENST00000358918 LRRC9Q6ZRR7 1453 aa20.15■□□□□ 0.82
APP-205ENST00000358918 SETD5Q9C0A6 1442 aa20.15■□□□□ 0.82
APP-205ENST00000358918 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
APP-205ENST00000358918 FYCO1Q9BQS8 1478 aa20.12■□□□□ 0.81
APP-205ENST00000358918 CASKIN1Q8WXD9 1431 aa20.12■□□□□ 0.81
APP-205ENST00000358918 TIMELESSQ9UNS1 1208 aa20.12■□□□□ 0.81
APP-205ENST00000358918 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
APP-205ENST00000358918 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
APP-205ENST00000358918 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
APP-205ENST00000358918 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
APP-205ENST00000358918 SAMD9Q5K651 1589 aa20.1■□□□□ 0.81
APP-205ENST00000358918 SIN3AQ96ST3 1273 aa20.09■□□□□ 0.81
APP-205ENST00000358918 MYT1LQ9UL68 1186 aa20.07■□□□□ 0.8
APP-205ENST00000358918 PHLDB1Q86UU1 1377 aa20.06■□□□□ 0.8
APP-205ENST00000358918 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
APP-205ENST00000358918 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
APP-205ENST00000358918 EIF4G3O43432 1585 aaKnown RBP20.02■□□□□ 0.79
APP-205ENST00000358918 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
APP-205ENST00000358918 IQGAP2Q13576 1575 aa20.01■□□□□ 0.79
APP-205ENST00000358918 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
APP-205ENST00000358918 MTUS2Q5JR59 1369 aa19.94■□□□□ 0.78
APP-205ENST00000358918 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.78
APP-205ENST00000358918 ERICH6BQ5W0A0 696 aa19.94■□□□□ 0.78
APP-205ENST00000358918 LRRIQ1Q96JM4 1722 aa19.94■□□□□ 0.78
APP-205ENST00000358918 IRX6P78412 446 aaPredicted RBP19.92■□□□□ 0.78
APP-205ENST00000358918 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
APP-205ENST00000358918 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
APP-205ENST00000358918 KIAA0586Q9BVV6 1533 aa19.89■□□□□ 0.77
APP-205ENST00000358918 DEKP35659 375 aaKnown RBP19.88■□□□□ 0.77
APP-205ENST00000358918 FBLN2P98095 1184 aa19.88■□□□□ 0.77
APP-205ENST00000358918 UGGT2Q9NYU1 1516 aa19.88■□□□□ 0.77
APP-205ENST00000358918 PPP4R2Q9NY27 417 aa19.88■□□□□ 0.77
APP-205ENST00000358918 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
APP-205ENST00000358918 MAGI1Q96QZ7 1491 aaPredicted RBP19.88■□□□□ 0.77
APP-205ENST00000358918 ARID3CA6NKF2 412 aa19.84■□□□□ 0.77
APP-205ENST00000358918 SYNJ2O15056 1496 aa19.83■□□□□ 0.77
APP-205ENST00000358918 FGD6Q6ZV73 1430 aa19.83■□□□□ 0.76
APP-205ENST00000358918 HECW1Q76N89 1606 aa19.82■□□□□ 0.76
APP-205ENST00000358918 NCOA2Q15596 1464 aa19.82■□□□□ 0.76
APP-205ENST00000358918 DISP1Q96F81 1524 aa19.82■□□□□ 0.76
APP-205ENST00000358918 CCDC18Q5T9S5 1454 aa19.81■□□□□ 0.76
APP-205ENST00000358918 MAGI3Q5TCQ9 1506 aa19.8■□□□□ 0.76
APP-205ENST00000358918 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
APP-205ENST00000358918 KIAA0556O60303 1618 aa19.8■□□□□ 0.76
APP-205ENST00000358918 EPRSP07814 1512 aaKnown RBP19.79■□□□□ 0.76
APP-205ENST00000358918 CEP170Q5SW79 1584 aa19.79■□□□□ 0.76
APP-205ENST00000358918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.76
APP-205ENST00000358918 SUPT6HQ7KZ85 1726 aaKnown RBP19.78■□□□□ 0.76
APP-205ENST00000358918 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
APP-205ENST00000358918 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
APP-205ENST00000358918 PRKCSHP14314 528 aaPredicted RBP19.75■□□□□ 0.75
APP-205ENST00000358918 NOP58Q9Y2X3 529 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms