RNA–Protein interactions for RNA: ENST00000358355.5

USP20-202, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-202ENST00000358355 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.461e-7■■■■■ 33.9
USP20-202ENST00000358355 FGD5Q6ZNL6 1462 aa17.92■□□□□ 0.46
USP20-202ENST00000358355 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
USP20-202ENST00000358355 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
USP20-202ENST00000358355 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
USP20-202ENST00000358355 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
USP20-202ENST00000358355 STAG3Q9UJ98 1225 aa17.87■□□□□ 0.45
USP20-202ENST00000358355 CHIC2Q9UKJ5 165 aa17.86■□□□□ 0.45
USP20-202ENST00000358355 CLSPNQ9HAW4 1339 aa17.86■□□□□ 0.45
USP20-202ENST00000358355 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
USP20-202ENST00000358355 KCNH8Q96L42 1107 aa17.83■□□□□ 0.44
USP20-202ENST00000358355 NEFMP07197 916 aa17.83■□□□□ 0.44
USP20-202ENST00000358355 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
USP20-202ENST00000358355 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
USP20-202ENST00000358355 PLEKHD1A6NEE1 506 aa17.8■□□□□ 0.44
USP20-202ENST00000358355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
USP20-202ENST00000358355 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
USP20-202ENST00000358355 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
USP20-202ENST00000358355 POLA1P09884 1462 aaPredicted RBP17.74■□□□□ 0.43
USP20-202ENST00000358355 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
USP20-202ENST00000358355 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
USP20-202ENST00000358355 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
USP20-202ENST00000358355 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
USP20-202ENST00000358355 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
USP20-202ENST00000358355 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
USP20-202ENST00000358355 CUX1P39880 1505 aa17.68■□□□□ 0.42
USP20-202ENST00000358355 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
USP20-202ENST00000358355 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
USP20-202ENST00000358355 DNMBPQ6XZF7 1577 aa17.65■□□□□ 0.42
USP20-202ENST00000358355 IGF1RP08069 1367 aa17.64■□□□□ 0.41
USP20-202ENST00000358355 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
USP20-202ENST00000358355 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
USP20-202ENST00000358355 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
USP20-202ENST00000358355 CFDP1Q9UEE9 299 aaPredicted RBP17.62■□□□□ 0.41
USP20-202ENST00000358355 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
USP20-202ENST00000358355 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
USP20-202ENST00000358355 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
USP20-202ENST00000358355 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
USP20-202ENST00000358355 KDM2AQ9Y2K7 1162 aa17.59■□□□□ 0.41
USP20-202ENST00000358355 RAPGEF2Q9Y4G8 1499 aa17.58■□□□□ 0.41
USP20-202ENST00000358355 DDX10Q13206 875 aaKnown RBP17.58■□□□□ 0.4
USP20-202ENST00000358355 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
USP20-202ENST00000358355 GTF3C3Q9Y5Q9 886 aa17.54■□□□□ 0.4
USP20-202ENST00000358355 MYT1Q01538 1121 aa17.52■□□□□ 0.4
USP20-202ENST00000358355 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
USP20-202ENST00000358355 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.39
USP20-202ENST00000358355 TOP2BQ02880 1626 aa17.48■□□□□ 0.39
USP20-202ENST00000358355 RTL5Q5HYW3 569 aaPredicted RBP17.47■□□□□ 0.39
USP20-202ENST00000358355 TMC1Q8TDI8 760 aa17.47■□□□□ 0.39
USP20-202ENST00000358355 PTPRGP23470 1445 aa17.46■□□□□ 0.39
USP20-202ENST00000358355 EIF4G2P78344 907 aaKnown RBP eCLIP17.46■□□□□ 0.39
USP20-202ENST00000358355 PPP1R15AO75807 674 aaPredicted RBP17.44■□□□□ 0.38
USP20-202ENST00000358355 HNRNPUQ00839 825 aaKnown RBP eCLIP17.44■□□□□ 0.38
USP20-202ENST00000358355 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
USP20-202ENST00000358355 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
USP20-202ENST00000358355 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
USP20-202ENST00000358355 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
USP20-202ENST00000358355 ARID4BQ4LE39 1312 aaPredicted RBP17.41■□□□□ 0.38
USP20-202ENST00000358355 FHOD3Q2V2M9 1422 aa17.41■□□□□ 0.38
USP20-202ENST00000358355 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
USP20-202ENST00000358355 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
USP20-202ENST00000358355 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP20-202ENST00000358355 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
USP20-202ENST00000358355 WDR62O43379 1518 aa17.34■□□□□ 0.37
USP20-202ENST00000358355 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
USP20-202ENST00000358355 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.37
USP20-202ENST00000358355 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
USP20-202ENST00000358355 FAM69CQ0P6D2 419 aa17.31■□□□□ 0.36
USP20-202ENST00000358355 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
USP20-202ENST00000358355 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
USP20-202ENST00000358355 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
USP20-202ENST00000358355 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
USP20-202ENST00000358355 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
USP20-202ENST00000358355 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
USP20-202ENST00000358355 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
USP20-202ENST00000358355 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
USP20-202ENST00000358355 CARD11Q9BXL7 1154 aa17.24■□□□□ 0.35
USP20-202ENST00000358355 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
USP20-202ENST00000358355 FKBP8Q14318 412 aa17.24■□□□□ 0.35
USP20-202ENST00000358355 MLECQ14165 292 aa17.23■□□□□ 0.35
USP20-202ENST00000358355 SIN3AQ96ST3 1273 aa17.18■□□□□ 0.34
USP20-202ENST00000358355 ANP32AP39687 249 aaKnown RBP17.18■□□□□ 0.34
USP20-202ENST00000358355 KANK1Q14678 1352 aa17.18■□□□□ 0.34
USP20-202ENST00000358355 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
USP20-202ENST00000358355 MIER1Q8N108 512 aa17.18■□□□□ 0.34
USP20-202ENST00000358355 KIAA0586Q9BVV6 1533 aa17.18■□□□□ 0.34
USP20-202ENST00000358355 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
USP20-202ENST00000358355 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
USP20-202ENST00000358355 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
USP20-202ENST00000358355 PRXQ9BXM0 1461 aa17.16■□□□□ 0.34
USP20-202ENST00000358355 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
USP20-202ENST00000358355 KANK4Q5T7N3 995 aaPredicted RBP17.15■□□□□ 0.34
USP20-202ENST00000358355 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
USP20-202ENST00000358355 POGKQ9P215 609 aa17.14■□□□□ 0.34
USP20-202ENST00000358355 ARHGAP35Q9NRY4 1499 aa17.14■□□□□ 0.33
USP20-202ENST00000358355 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
USP20-202ENST00000358355 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.33
USP20-202ENST00000358355 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
USP20-202ENST00000358355 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
USP20-202ENST00000358355 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms