RNA–Protein interactions for RNA: ENST00000358355.5

USP20-202, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,371 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-202ENST00000358355 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
USP20-202ENST00000358355 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
USP20-202ENST00000358355 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.06
USP20-202ENST00000358355 ABCC9O60706 1549 aa21.51■■□□□ 1.03
USP20-202ENST00000358355 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
USP20-202ENST00000358355 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
USP20-202ENST00000358355 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
USP20-202ENST00000358355 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.9
USP20-202ENST00000358355 APLP2Q06481 763 aa20.41■□□□□ 0.86
USP20-202ENST00000358355 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
USP20-202ENST00000358355 ZCCHC6Q5VYS8 1495 aaKnown RBP20.23■□□□□ 0.83
USP20-202ENST00000358355 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
USP20-202ENST00000358355 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
USP20-202ENST00000358355 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
USP20-202ENST00000358355 NACADO15069 1562 aa20.01■□□□□ 0.79
USP20-202ENST00000358355 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
USP20-202ENST00000358355 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
USP20-202ENST00000358355 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
USP20-202ENST00000358355 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
USP20-202ENST00000358355 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
USP20-202ENST00000358355 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
USP20-202ENST00000358355 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
USP20-202ENST00000358355 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
USP20-202ENST00000358355 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
USP20-202ENST00000358355 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
USP20-202ENST00000358355 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
USP20-202ENST00000358355 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
USP20-202ENST00000358355 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
USP20-202ENST00000358355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
USP20-202ENST00000358355 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
USP20-202ENST00000358355 LOC105371045A0A1W2PR82 267 aa19.16■□□□□ 0.66
USP20-202ENST00000358355 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
USP20-202ENST00000358355 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
USP20-202ENST00000358355 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
USP20-202ENST00000358355 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
USP20-202ENST00000358355 MYT1LQ9UL68 1186 aa19.07■□□□□ 0.64
USP20-202ENST00000358355 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
USP20-202ENST00000358355 ITGAEP38570 1179 aa19.05■□□□□ 0.64
USP20-202ENST00000358355 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
USP20-202ENST00000358355 FBLN2P98095 1184 aa18.95■□□□□ 0.62
USP20-202ENST00000358355 MROH2BQ7Z745 1585 aa18.95■□□□□ 0.62
USP20-202ENST00000358355 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
USP20-202ENST00000358355 BICRAQ9NZM4 1560 aa18.85■□□□□ 0.61
USP20-202ENST00000358355 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
USP20-202ENST00000358355 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
USP20-202ENST00000358355 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
USP20-202ENST00000358355 NEFLP07196 543 aa18.73■□□□□ 0.59
USP20-202ENST00000358355 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
USP20-202ENST00000358355 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
USP20-202ENST00000358355 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
USP20-202ENST00000358355 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
USP20-202ENST00000358355 POLR3GLQ9BT43 218 aa18.66■□□□□ 0.58
USP20-202ENST00000358355 WIZO95785 1651 aa18.66■□□□□ 0.58
USP20-202ENST00000358355 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
USP20-202ENST00000358355 HRCP23327 699 aa18.65■□□□□ 0.58
USP20-202ENST00000358355 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
USP20-202ENST00000358355 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
USP20-202ENST00000358355 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
USP20-202ENST00000358355 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
USP20-202ENST00000358355 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
USP20-202ENST00000358355 TRIM52Q96A61 297 aa18.53■□□□□ 0.56
USP20-202ENST00000358355 ERICH6Q7L0X2 663 aa18.51■□□□□ 0.55
USP20-202ENST00000358355 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
USP20-202ENST00000358355 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
USP20-202ENST00000358355 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
USP20-202ENST00000358355 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
USP20-202ENST00000358355 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
USP20-202ENST00000358355 NESP48681 1621 aa18.38■□□□□ 0.53
USP20-202ENST00000358355 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
USP20-202ENST00000358355 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
USP20-202ENST00000358355 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
USP20-202ENST00000358355 NEUROD1Q13562 356 aa18.34■□□□□ 0.53
USP20-202ENST00000358355 CEP164Q9UPV0 1460 aa18.3■□□□□ 0.52
USP20-202ENST00000358355 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
USP20-202ENST00000358355 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
USP20-202ENST00000358355 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
USP20-202ENST00000358355 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
USP20-202ENST00000358355 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
USP20-202ENST00000358355 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
USP20-202ENST00000358355 SOGA1O94964 1423 aa18.19■□□□□ 0.5
USP20-202ENST00000358355 NPM1P06748 294 aaKnown RBP eCLIP18.18■□□□□ 0.5
USP20-202ENST00000358355 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
USP20-202ENST00000358355 CUX2O14529 1486 aa18.13■□□□□ 0.49
USP20-202ENST00000358355 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
USP20-202ENST00000358355 CFTRP13569 1480 aa18.08■□□□□ 0.48
USP20-202ENST00000358355 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
USP20-202ENST00000358355 ANP32CO43423 234 aa18.03■□□□□ 0.48
USP20-202ENST00000358355 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
USP20-202ENST00000358355 BCANQ96GW7 911 aa18.01■□□□□ 0.47
USP20-202ENST00000358355 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
USP20-202ENST00000358355 EEA1Q15075 1411 aa17.97■□□□□ 0.47
USP20-202ENST00000358355 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
USP20-202ENST00000358355 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
USP20-202ENST00000358355 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
USP20-202ENST00000358355 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
USP20-202ENST00000358355 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
USP20-202ENST00000358355 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
USP20-202ENST00000358355 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
USP20-202ENST00000358355 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
USP20-202ENST00000358355 CLIP1P30622 1438 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms