RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 UBTFP17480 764 aaKnown RBP41.44■■■■■ 4.22
SSBP3-202ENST00000357475 OSCARQ8IYS5 282 aa41.41■■■■■ 4.22
SSBP3-202ENST00000357475 CLASP1Q7Z460 1538 aa41.4■■■■■ 4.22
SSBP3-202ENST00000357475 KIAA0586Q9BVV6 1533 aa41.35■■■■■ 4.21
SSBP3-202ENST00000357475 IQGAP2Q13576 1575 aa41.31■■■■■ 4.2
SSBP3-202ENST00000357475 TNIKQ9UKE5 1360 aa41.24■■■■■ 4.19
SSBP3-202ENST00000357475 SHROOM2Q13796 1616 aa41.18■■■■■ 4.18
SSBP3-202ENST00000357475 RANGAP1P46060 587 aaPredicted RBP41.17■■■■■ 4.18
SSBP3-202ENST00000357475 JPH4Q96JJ6 628 aa41.13■■■■■ 4.17
SSBP3-202ENST00000357475 UGGT2Q9NYU1 1516 aa41.09■■■■■ 4.17
SSBP3-202ENST00000357475 ERCC6L2Q5T890 1561 aa41.04■■■■■ 4.16
SSBP3-202ENST00000357475 PRG4Q92954 1404 aaPredicted RBP41■■■■■ 4.15
SSBP3-202ENST00000357475 DISP1Q96F81 1524 aa40.99■■■■■ 4.15
SSBP3-202ENST00000357475 CEP162Q5TB80 1403 aa40.98■■■■■ 4.15
SSBP3-202ENST00000357475 SAMD9Q5K651 1589 aa40.97■■■■■ 4.15
SSBP3-202ENST00000357475 KIAA0556O60303 1618 aa40.93■■■■■ 4.14
SSBP3-202ENST00000357475 ARHGAP35Q9NRY4 1499 aa40.9■■■■■ 4.14
SSBP3-202ENST00000357475 CLIP1P30622 1438 aa40.9■■■■■ 4.14
SSBP3-202ENST00000357475 P3H3Q8IVL6 736 aa40.89■■■■■ 4.14
SSBP3-202ENST00000357475 EFCAB5A4FU69 1503 aa40.87■■■■■ 4.13
SSBP3-202ENST00000357475 ARHGEF11O15085 1522 aa40.84■■■■■ 4.13
SSBP3-202ENST00000357475 CARMIL2Q6F5E8 1435 aa40.82■■■■■ 4.13
SSBP3-202ENST00000357475 FHOD3Q2V2M9 1422 aa40.8■■■■■ 4.12
SSBP3-202ENST00000357475 RIMBP3CA6NJZ7 1639 aa40.79■■■■■ 4.12
SSBP3-202ENST00000357475 RIMBP3BA6NNM3 1639 aa40.79■■■■■ 4.12
SSBP3-202ENST00000357475 RIMBP3Q9UFD9 1639 aa40.79■■■■■ 4.12
SSBP3-202ENST00000357475 ARAP1Q96P48 1450 aa40.75■■■■■ 4.11
SSBP3-202ENST00000357475 TTBK1Q5TCY1 1321 aaPredicted RBP40.72■■■■■ 4.11
SSBP3-202ENST00000357475 DNAJC5Q9H3Z4 198 aa40.65■■■■■ 4.1
SSBP3-202ENST00000357475 PTPRGP23470 1445 aa40.59■■■■■ 4.09
SSBP3-202ENST00000357475 PLB1Q6P1J6 1458 aa40.48■■■■■ 4.07
SSBP3-202ENST00000357475 FMN1Q68DA7 1419 aa40.45■■■■■ 4.07
SSBP3-202ENST00000357475 ABCA8O94911 1581 aa40.42■■■■■ 4.06
SSBP3-202ENST00000357475 CYB5RLQ6IPT4 315 aa40.41■■■■■ 4.06
SSBP3-202ENST00000357475 PCF11O94913 1555 aaKnown RBP40.41■■■■■ 4.06
SSBP3-202ENST00000357475 RAPGEF6Q8TEU7 1601 aa40.39■■■■■ 4.06
SSBP3-202ENST00000357475 VPS8Q8N3P4 1428 aa40.38■■■■■ 4.05
SSBP3-202ENST00000357475 UACAQ9BZF9 1416 aa40.35■■■■■ 4.05
SSBP3-202ENST00000357475 ADCY10Q96PN6 1610 aa40.34■■■■■ 4.05
SSBP3-202ENST00000357475 ABCC2Q92887 1545 aa40.29■■■■■ 4.04
SSBP3-202ENST00000357475 CASKIN1Q8WXD9 1431 aa40.29■■■■■ 4.04
SSBP3-202ENST00000357475 LRRIQ1Q96JM4 1722 aa40.28■■■■■ 4.04
SSBP3-202ENST00000357475 NUP153P49790 1475 aaKnown RBP40.25■■■■■ 4.03
SSBP3-202ENST00000357475 FYCO1Q9BQS8 1478 aa40.24■■■■■ 4.03
SSBP3-202ENST00000357475 ATP1B4Q9UN42 357 aaPredicted RBP40.24■■■■■ 4.03
SSBP3-202ENST00000357475 UHRF1BP1LA0JNW5 1464 aa40.23■■■■■ 4.03
SSBP3-202ENST00000357475 ARID3CA6NKF2 412 aa40.23■■■■■ 4.03
SSBP3-202ENST00000357475 HECW1Q76N89 1606 aa40.23■■■■■ 4.03
SSBP3-202ENST00000357475 CDK13Q14004 1512 aaKnown RBP40.13■■■■■ 4.01
SSBP3-202ENST00000357475 EPRSP07814 1512 aaKnown RBP40.11■■■■■ 4.01
SSBP3-202ENST00000357475 ZCCHC11Q5TAX3 1644 aaKnown RBP40.1■■■■■ 4.01
SSBP3-202ENST00000357475 ATP10BO94823 1461 aa40.1■■■■■ 4.01
SSBP3-202ENST00000357475 KDM5BQ9UGL1 1544 aa40.08■■■■■ 4.01
SSBP3-202ENST00000357475 CCDC18Q5T9S5 1454 aa39.99■■■■□ 3.99
SSBP3-202ENST00000357475 CFAP43Q8NDM7 1665 aa39.99■■■■□ 3.99
SSBP3-202ENST00000357475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.96■■■■□ 3.99
SSBP3-202ENST00000357475 HNRNPUL2Q1KMD3 747 aaKnown RBP39.96■■■■□ 3.99
SSBP3-202ENST00000357475 TIAM1Q13009 1591 aa39.95■■■■□ 3.99
SSBP3-202ENST00000357475 MAGI3Q5TCQ9 1506 aa39.89■■■■□ 3.98
SSBP3-202ENST00000357475 NPM1P06748 294 aaKnown RBP eCLIP39.89■■■■□ 3.98
SSBP3-202ENST00000357475 MAP3K1Q13233 1512 aa39.85■■■■□ 3.97
SSBP3-202ENST00000357475 APLP2Q06481 763 aa39.81■■■■□ 3.96
SSBP3-202ENST00000357475 KANK4Q5T7N3 995 aaPredicted RBP39.81■■■■□ 3.96
SSBP3-202ENST00000357475 ASXL2Q76L83 1435 aa39.8■■■■□ 3.96
SSBP3-202ENST00000357475 MAPKBP1O60336 1514 aa39.79■■■■□ 3.96
SSBP3-202ENST00000357475 LRRC9Q6ZRR7 1453 aa39.75■■■■□ 3.95
SSBP3-202ENST00000357475 PPARGC1BQ86YN6 1023 aaKnown RBP39.75■■■■□ 3.95
SSBP3-202ENST00000357475 WDR7Q9Y4E6 1490 aa39.73■■■■□ 3.95
SSBP3-202ENST00000357475 PLEKHD1A6NEE1 506 aa39.72■■■■□ 3.95
SSBP3-202ENST00000357475 TROQ12816 1431 aaPredicted RBP39.7■■■■□ 3.95
SSBP3-202ENST00000357475 CDK11AQ9UQ88 783 aaPredicted RBP39.7■■■■□ 3.95
SSBP3-202ENST00000357475 MTUS2Q5JR59 1369 aa39.69■■■■□ 3.94
SSBP3-202ENST00000357475 EHBP1L1Q8N3D4 1523 aa39.68■■■■□ 3.94
SSBP3-202ENST00000357475 KIF14Q15058 1648 aa39.67■■■■□ 3.94
SSBP3-202ENST00000357475 KCNH8Q96L42 1107 aa39.63■■■■□ 3.93
SSBP3-202ENST00000357475 SUPT6HQ7KZ85 1726 aaKnown RBP39.54■■■■□ 3.92
SSBP3-202ENST00000357475 DIP2BQ9P265 1576 aa39.53■■■■□ 3.92
SSBP3-202ENST00000357475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.51■■■■□ 3.923e-8■■■□□ 17.7
SSBP3-202ENST00000357475 TTC37Q6PGP7 1564 aa39.51■■■■□ 3.91
SSBP3-202ENST00000357475 ABCC10Q5T3U5 1492 aa39.5■■■■□ 3.91
SSBP3-202ENST00000357475 KIF13AQ9H1H9 1805 aa39.49■■■■□ 3.91
SSBP3-202ENST00000357475 NCOA2Q15596 1464 aa39.49■■■■□ 3.91
SSBP3-202ENST00000357475 ABCA9Q8IUA7 1624 aa39.44■■■■□ 3.9
SSBP3-202ENST00000357475 GLI2P10070 1586 aa39.4■■■■□ 3.9
SSBP3-202ENST00000357475 FAM69CQ0P6D2 419 aa39.39■■■■□ 3.9
SSBP3-202ENST00000357475 CDC42BPAQ5VT25 1732 aa39.36■■■■□ 3.89
SSBP3-202ENST00000357475 MAP3K4Q9Y6R4 1608 aa39.35■■■■□ 3.89
SSBP3-202ENST00000357475 PHLDB1Q86UU1 1377 aa39.34■■■■□ 3.89
SSBP3-202ENST00000357475 MYO5CQ9NQX4 1742 aa39.33■■■■□ 3.89
SSBP3-202ENST00000357475 GPATCH8Q9UKJ3 1502 aaKnown RBP39.3■■■■□ 3.88
SSBP3-202ENST00000357475 CCNB3Q8WWL7 1395 aa39.29■■■■□ 3.88
SSBP3-202ENST00000357475 CDC42BPBQ9Y5S2 1711 aa39.28■■■■□ 3.88
SSBP3-202ENST00000357475 PREX2Q70Z35 1606 aa39.27■■■■□ 3.88
SSBP3-202ENST00000357475 TSPOAP1O95153 1857 aa39.27■■■■□ 3.88
SSBP3-202ENST00000357475 CD109Q6YHK3 1445 aa39.26■■■■□ 3.88
SSBP3-202ENST00000357475 TRHP20396 242 aaPredicted RBP39.24■■■■□ 3.87
SSBP3-202ENST00000357475 ITSN2Q9NZM3 1697 aa39.23■■■■□ 3.87
SSBP3-202ENST00000357475 PPRC1Q5VV67 1664 aaKnown RBP39.22■■■■□ 3.87
SSBP3-202ENST00000357475 MYOM3Q5VTT5 1437 aa39.21■■■■□ 3.87
SSBP3-202ENST00000357475 PLCH2O75038 1416 aa39.21■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms