RNA–Protein interactions for RNA: ENST00000357248.8

SMARCA2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-204ENST00000357248 NBR1Q14596 966 aa18.37■□□□□ 0.53
SMARCA2-204ENST00000357248 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
SMARCA2-204ENST00000357248 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
SMARCA2-204ENST00000357248 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
SMARCA2-204ENST00000357248 ZRSR1Q15695 479 aaKnown RBP18.31■□□□□ 0.52
SMARCA2-204ENST00000357248 TULP1O00294 542 aaPredicted RBP18.3■□□□□ 0.52
SMARCA2-204ENST00000357248 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
SMARCA2-204ENST00000357248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.524e-7■■■■□ 23.1
SMARCA2-204ENST00000357248 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
SMARCA2-204ENST00000357248 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
SMARCA2-204ENST00000357248 TRIM44Q96DX7 344 aaPredicted RBP18.28■□□□□ 0.52
SMARCA2-204ENST00000357248 C14orf37Q86TY3 774 aa18.28■□□□□ 0.52
SMARCA2-204ENST00000357248 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
SMARCA2-204ENST00000357248 GOLGA6L22H0YM25 854 aa18.25■□□□□ 0.51
SMARCA2-204ENST00000357248 TNIKQ9UKE5 1360 aa18.24■□□□□ 0.51
SMARCA2-204ENST00000357248 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
SMARCA2-204ENST00000357248 DDX10Q13206 875 aaKnown RBP18.23■□□□□ 0.51
SMARCA2-204ENST00000357248 BECN1Q14457 450 aa18.23■□□□□ 0.51
SMARCA2-204ENST00000357248 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
SMARCA2-204ENST00000357248 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
SMARCA2-204ENST00000357248 ANP32EQ9BTT0 268 aa18.21■□□□□ 0.51
SMARCA2-204ENST00000357248 BAZ1BQ9UIG0 1483 aaKnown RBP18.21■□□□□ 0.51
SMARCA2-204ENST00000357248 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
SMARCA2-204ENST00000357248 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
SMARCA2-204ENST00000357248 PTMAP06454 111 aaKnown RBP18.2■□□□□ 0.5
SMARCA2-204ENST00000357248 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
SMARCA2-204ENST00000357248 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
SMARCA2-204ENST00000357248 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
SMARCA2-204ENST00000357248 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
SMARCA2-204ENST00000357248 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
SMARCA2-204ENST00000357248 PPP1R15AO75807 674 aaPredicted RBP18.15■□□□□ 0.5
SMARCA2-204ENST00000357248 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
SMARCA2-204ENST00000357248 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
SMARCA2-204ENST00000357248 DNTTIP2Q5QJE6 756 aaKnown RBP18.13■□□□□ 0.49
SMARCA2-204ENST00000357248 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
SMARCA2-204ENST00000357248 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
SMARCA2-204ENST00000357248 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
SMARCA2-204ENST00000357248 CHIC2Q9UKJ5 165 aa18.11■□□□□ 0.49
SMARCA2-204ENST00000357248 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
SMARCA2-204ENST00000357248 TPRNQ4KMQ1 711 aa18.09■□□□□ 0.49
SMARCA2-204ENST00000357248 SOGA1O94964 1423 aa18.09■□□□□ 0.49
SMARCA2-204ENST00000357248 NPHP1O15259 732 aa18.08■□□□□ 0.48
SMARCA2-204ENST00000357248 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
SMARCA2-204ENST00000357248 GOLGA6L6A8MZA4 724 aa18.03■□□□□ 0.48
SMARCA2-204ENST00000357248 IRX6P78412 446 aaPredicted RBP18.02■□□□□ 0.48
SMARCA2-204ENST00000357248 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
SMARCA2-204ENST00000357248 CFAP53Q96M91 514 aa18.02■□□□□ 0.48
SMARCA2-204ENST00000357248 TAOK2Q9UL54 1235 aa18.01■□□□□ 0.47
SMARCA2-204ENST00000357248 PLCB2Q00722 1185 aa17.97■□□□□ 0.47
SMARCA2-204ENST00000357248 NRDCO43847 1150 aa17.96■□□□□ 0.47
SMARCA2-204ENST00000357248 FTSJ3Q8IY81 847 aaKnown RBP17.96■□□□□ 0.47
SMARCA2-204ENST00000357248 CLSTN1O94985 981 aa17.95■□□□□ 0.46
SMARCA2-204ENST00000357248 FGD1P98174 961 aa17.95■□□□□ 0.46
SMARCA2-204ENST00000357248 PPM1GO15355 546 aaPredicted RBP17.94■□□□□ 0.46
SMARCA2-204ENST00000357248 KIF21BO75037 1637 aa17.93■□□□□ 0.46
SMARCA2-204ENST00000357248 CLIP1P30622 1438 aa17.93■□□□□ 0.46
SMARCA2-204ENST00000357248 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
SMARCA2-204ENST00000357248 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
SMARCA2-204ENST00000357248 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.462e-6■■■■□ 21.2
SMARCA2-204ENST00000357248 ERICH6BQ5W0A0 696 aa17.9■□□□□ 0.46
SMARCA2-204ENST00000357248 OS9Q13438 667 aaPredicted RBP17.9■□□□□ 0.46
SMARCA2-204ENST00000357248 LMOD2Q6P5Q4 547 aa17.89■□□□□ 0.45
SMARCA2-204ENST00000357248 NAP1L2Q9ULW6 460 aaPredicted RBP17.89■□□□□ 0.45
SMARCA2-204ENST00000357248 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
SMARCA2-204ENST00000357248 NAP1L5Q96NT1 182 aaPredicted RBP17.89■□□□□ 0.45
SMARCA2-204ENST00000357248 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
SMARCA2-204ENST00000357248 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
SMARCA2-204ENST00000357248 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
SMARCA2-204ENST00000357248 KCNJ4P48050 445 aa17.87■□□□□ 0.45
SMARCA2-204ENST00000357248 CDCA8Q53HL2 280 aa17.86■□□□□ 0.45
SMARCA2-204ENST00000357248 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
SMARCA2-204ENST00000357248 SYNJ1O43426 1573 aa17.86■□□□□ 0.45
SMARCA2-204ENST00000357248 MTUS2Q5JR59 1369 aa17.85■□□□□ 0.45
SMARCA2-204ENST00000357248 KNSTRNQ9Y448 316 aa17.84■□□□□ 0.45
SMARCA2-204ENST00000357248 GOLGA6L4A6NEF3 574 aa17.83■□□□□ 0.44
SMARCA2-204ENST00000357248 CHMP4BQ9H444 224 aaKnown RBP17.83■□□□□ 0.44
SMARCA2-204ENST00000357248 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
SMARCA2-204ENST00000357248 L1TD1Q5T7N2 865 aaKnown RBP17.82■□□□□ 0.44
SMARCA2-204ENST00000357248 VPS8Q8N3P4 1428 aa17.82■□□□□ 0.44
SMARCA2-204ENST00000357248 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
SMARCA2-204ENST00000357248 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
SMARCA2-204ENST00000357248 HIRIP3Q9BW71 556 aaPredicted RBP17.81■□□□□ 0.44
SMARCA2-204ENST00000357248 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
SMARCA2-204ENST00000357248 ISY1Q9ULR0 285 aaKnown RBP17.8■□□□□ 0.44
SMARCA2-204ENST00000357248 NEUROD2Q15784 382 aa17.8■□□□□ 0.44
SMARCA2-204ENST00000357248 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
SMARCA2-204ENST00000357248 CHAF1AQ13111 956 aaPredicted RBP17.79■□□□□ 0.44
SMARCA2-204ENST00000357248 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
SMARCA2-204ENST00000357248 KIF27Q86VH2 1401 aa17.78■□□□□ 0.44
SMARCA2-204ENST00000357248 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
SMARCA2-204ENST00000357248 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
SMARCA2-204ENST00000357248 POGKQ9P215 609 aa17.74■□□□□ 0.43
SMARCA2-204ENST00000357248 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
SMARCA2-204ENST00000357248 FRAT1Q92837 279 aaPredicted RBP17.73■□□□□ 0.43
SMARCA2-204ENST00000357248 MS4A1P11836 297 aa17.73■□□□□ 0.43
SMARCA2-204ENST00000357248 RGS3P49796 1198 aa17.73■□□□□ 0.43
SMARCA2-204ENST00000357248 PRM3Q9NNZ6 103 aa17.71■□□□□ 0.43
SMARCA2-204ENST00000357248 KIAA2012Q0VF49 1180 aa17.71■□□□□ 0.43
SMARCA2-204ENST00000357248 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
SMARCA2-204ENST00000357248 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms