RNA–Protein interactions for RNA: ENST00000357248.8

SMARCA2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-204ENST00000357248 NISCHQ9Y2I1 1504 aa24.38■■□□□ 1.49
SMARCA2-204ENST00000357248 DCAF8L2P0C7V8 631 aa23.49■■□□□ 1.35
SMARCA2-204ENST00000357248 PELP1Q8IZL8 1130 aaKnown RBP22.38■■□□□ 1.17
SMARCA2-204ENST00000357248 SUPT5HO00267 1087 aaKnown RBP22.03■■□□□ 1.12
SMARCA2-204ENST00000357248 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
SMARCA2-204ENST00000357248 APLP2Q06481 763 aa21.7■■□□□ 1.06
SMARCA2-204ENST00000357248 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.04
SMARCA2-204ENST00000357248 ERICH6Q7L0X2 663 aa21.52■■□□□ 1.04
SMARCA2-204ENST00000357248 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
SMARCA2-204ENST00000357248 SHROOM4Q9ULL8 1493 aa21.28■■□□□ 1
SMARCA2-204ENST00000357248 TTBK1Q5TCY1 1321 aaPredicted RBP21.1■□□□□ 0.97
SMARCA2-204ENST00000357248 CENPBP07199 599 aaPredicted RBP21.02■□□□□ 0.96
SMARCA2-204ENST00000357248 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
SMARCA2-204ENST00000357248 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
SMARCA2-204ENST00000357248 ATP1B4Q9UN42 357 aaPredicted RBP20.86■□□□□ 0.93
SMARCA2-204ENST00000357248 RANGAP1P46060 587 aaPredicted RBP20.85■□□□□ 0.93
SMARCA2-204ENST00000357248 NEFLP07196 543 aa20.84■□□□□ 0.93
SMARCA2-204ENST00000357248 ZEB1P37275 1124 aaPredicted RBP20.65■□□□□ 0.9
SMARCA2-204ENST00000357248 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
SMARCA2-204ENST00000357248 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
SMARCA2-204ENST00000357248 MYT1Q01538 1121 aa20.5■□□□□ 0.87
SMARCA2-204ENST00000357248 YTHDC1Q96MU7 727 aaKnown RBP20.48■□□□□ 0.87
SMARCA2-204ENST00000357248 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
SMARCA2-204ENST00000357248 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
SMARCA2-204ENST00000357248 MYT1LQ9UL68 1186 aa20.35■□□□□ 0.85
SMARCA2-204ENST00000357248 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
SMARCA2-204ENST00000357248 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
SMARCA2-204ENST00000357248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
SMARCA2-204ENST00000357248 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
SMARCA2-204ENST00000357248 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
SMARCA2-204ENST00000357248 ZNF316A6NFI3 1004 aaPredicted RBP19.98■□□□□ 0.79
SMARCA2-204ENST00000357248 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
SMARCA2-204ENST00000357248 CNGB1Q14028 1251 aaPredicted RBP19.96■□□□□ 0.79
SMARCA2-204ENST00000357248 CLSPNQ9HAW4 1339 aa19.95■□□□□ 0.78
SMARCA2-204ENST00000357248 ITGAEP38570 1179 aa19.92■□□□□ 0.78
SMARCA2-204ENST00000357248 RTL5Q5HYW3 569 aaPredicted RBP19.9■□□□□ 0.78
SMARCA2-204ENST00000357248 PPARGC1BQ86YN6 1023 aaKnown RBP19.9■□□□□ 0.78
SMARCA2-204ENST00000357248 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
SMARCA2-204ENST00000357248 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.74
SMARCA2-204ENST00000357248 ZBTB47Q9UFB7 747 aaPredicted RBP19.63■□□□□ 0.73
SMARCA2-204ENST00000357248 HRCP23327 699 aa19.53■□□□□ 0.72
SMARCA2-204ENST00000357248 SLC24A1O60721 1099 aa19.45■□□□□ 0.7
SMARCA2-204ENST00000357248 ABCC9O60706 1549 aa19.4■□□□□ 0.7
SMARCA2-204ENST00000357248 NACADO15069 1562 aa19.39■□□□□ 0.69
SMARCA2-204ENST00000357248 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
SMARCA2-204ENST00000357248 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
SMARCA2-204ENST00000357248 BCL11AQ9H165 835 aa19.36■□□□□ 0.69
SMARCA2-204ENST00000357248 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
SMARCA2-204ENST00000357248 FAM50AQ14320 339 aaKnown RBP19.31■□□□□ 0.68
SMARCA2-204ENST00000357248 NEFMP07197 916 aa19.29■□□□□ 0.68
SMARCA2-204ENST00000357248 CDK11AQ9UQ88 783 aaPredicted RBP19.23■□□□□ 0.67
SMARCA2-204ENST00000357248 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
SMARCA2-204ENST00000357248 DIEXFQ68CQ4 756 aaKnown RBP19.22■□□□□ 0.67
SMARCA2-204ENST00000357248 BCANQ96GW7 911 aa19.22■□□□□ 0.67
SMARCA2-204ENST00000357248 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
SMARCA2-204ENST00000357248 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
SMARCA2-204ENST00000357248 ANP32CO43423 234 aa19.15■□□□□ 0.66
SMARCA2-204ENST00000357248 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
SMARCA2-204ENST00000357248 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.65
SMARCA2-204ENST00000357248 ANP32BQ92688 251 aaKnown RBP19.07■□□□□ 0.64
SMARCA2-204ENST00000357248 ANP32AP39687 249 aaKnown RBP19■□□□□ 0.63
SMARCA2-204ENST00000357248 HSP90AA1P07900 732 aaKnown RBP18.95■□□□□ 0.62
SMARCA2-204ENST00000357248 FBLN2P98095 1184 aa18.92■□□□□ 0.62
SMARCA2-204ENST00000357248 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
SMARCA2-204ENST00000357248 EIF5BO60841 1220 aaKnown RBP18.89■□□□□ 0.61
SMARCA2-204ENST00000357248 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
SMARCA2-204ENST00000357248 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
SMARCA2-204ENST00000357248 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
SMARCA2-204ENST00000357248 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
SMARCA2-204ENST00000357248 CDK11BP21127 795 aaKnown RBP18.82■□□□□ 0.6
SMARCA2-204ENST00000357248 UPF2Q9HAU5 1272 aaKnown RBP18.82■□□□□ 0.6
SMARCA2-204ENST00000357248 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
SMARCA2-204ENST00000357248 STAG3Q9UJ98 1225 aa18.75■□□□□ 0.59
SMARCA2-204ENST00000357248 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
SMARCA2-204ENST00000357248 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
SMARCA2-204ENST00000357248 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
SMARCA2-204ENST00000357248 CHGAP10645 457 aaKnown RBP18.68■□□□□ 0.58
SMARCA2-204ENST00000357248 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
SMARCA2-204ENST00000357248 WIZO95785 1651 aa18.64■□□□□ 0.57
SMARCA2-204ENST00000357248 TOP2AP11388 1531 aaKnown RBP18.61■□□□□ 0.57
SMARCA2-204ENST00000357248 A0A0G2JS52 829 aa18.56■□□□□ 0.56
SMARCA2-204ENST00000357248 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.56■□□□□ 0.56
SMARCA2-204ENST00000357248 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
SMARCA2-204ENST00000357248 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
SMARCA2-204ENST00000357248 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
SMARCA2-204ENST00000357248 ARXQ96QS3 562 aa18.52■□□□□ 0.56
SMARCA2-204ENST00000357248 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMARCA2-204ENST00000357248 FKBP8Q14318 412 aa18.48■□□□□ 0.55
SMARCA2-204ENST00000357248 EEA1Q15075 1411 aa18.47■□□□□ 0.55
SMARCA2-204ENST00000357248 SALL2Q9Y467 1007 aaPredicted RBP18.46■□□□□ 0.55
SMARCA2-204ENST00000357248 MYH16Q9H6N6 1097 aa18.46■□□□□ 0.55
SMARCA2-204ENST00000357248 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMARCA2-204ENST00000357248 HNRNPUQ00839 825 aaKnown RBP eCLIP18.44■□□□□ 0.54
SMARCA2-204ENST00000357248 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
SMARCA2-204ENST00000357248 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
SMARCA2-204ENST00000357248 WDR43Q15061 677 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMARCA2-204ENST00000357248 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
SMARCA2-204ENST00000357248 CCDC136Q96JN2 1154 aa18.4■□□□□ 0.54
SMARCA2-204ENST00000357248 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
SMARCA2-204ENST00000357248 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms