RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 ERCC6L2Q5T890 1561 aa29.19■■■□□ 2.26
NCL-202ENST00000356936 KIAA0586Q9BVV6 1533 aa29.19■■■□□ 2.26
NCL-202ENST00000356936 PRG4Q92954 1404 aaPredicted RBP29.18■■■□□ 2.26
NCL-202ENST00000356936 RAPGEF2Q9Y4G8 1499 aa29.07■■■□□ 2.24
NCL-202ENST00000356936 TRHP20396 242 aaPredicted RBP29.04■■■□□ 2.24
NCL-202ENST00000356936 IQGAP2Q13576 1575 aa28.96■■■□□ 2.23
NCL-202ENST00000356936 CARMIL2Q6F5E8 1435 aa28.92■■■□□ 2.22
NCL-202ENST00000356936 PRXQ9BXM0 1461 aa28.88■■■□□ 2.21
NCL-202ENST00000356936 EEA1Q15075 1411 aa28.83■■■□□ 2.21
NCL-202ENST00000356936 PTPRGP23470 1445 aa28.82■■■□□ 2.2
NCL-202ENST00000356936 TNIKQ9UKE5 1360 aa28.81■■■□□ 2.2
NCL-202ENST00000356936 NPM1P06748 294 aaKnown RBP eCLIP28.81■■■□□ 2.26e-8■■■□□ 18.9
NCL-202ENST00000356936 CSRNP3Q8WYN3 585 aa28.81■■■□□ 2.2
NCL-202ENST00000356936 UGGT2Q9NYU1 1516 aa28.79■■■□□ 2.2
NCL-202ENST00000356936 DISP1Q96F81 1524 aa28.75■■■□□ 2.19
NCL-202ENST00000356936 CTTNBP2Q8WZ74 1663 aa28.74■■■□□ 2.19
NCL-202ENST00000356936 ADCY10Q96PN6 1610 aa28.73■■■□□ 2.19
NCL-202ENST00000356936 TTBK1Q5TCY1 1321 aaPredicted RBP28.7■■■□□ 2.19
NCL-202ENST00000356936 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
NCL-202ENST00000356936 GOLGA3Q08378 1498 aa28.66■■■□□ 2.18
NCL-202ENST00000356936 KIAA0556O60303 1618 aa28.66■■■□□ 2.18
NCL-202ENST00000356936 MAPKBP1O60336 1514 aa28.66■■■□□ 2.18
NCL-202ENST00000356936 UACAQ9BZF9 1416 aa28.61■■■□□ 2.17
NCL-202ENST00000356936 UHRF1BP1LA0JNW5 1464 aa28.6■■■□□ 2.17
NCL-202ENST00000356936 FAM9AQ8IZU1 332 aaPredicted RBP28.6■■■□□ 2.17
NCL-202ENST00000356936 ABCC2Q92887 1545 aa28.59■■■□□ 2.17
NCL-202ENST00000356936 ABCC10Q5T3U5 1492 aa28.55■■■□□ 2.16
NCL-202ENST00000356936 FAM69CQ0P6D2 419 aa28.52■■■□□ 2.16
NCL-202ENST00000356936 KIF13AQ9H1H9 1805 aa28.5■■■□□ 2.15
NCL-202ENST00000356936 KIF21BO75037 1637 aa28.49■■■□□ 2.15
NCL-202ENST00000356936 DIP2BQ9P265 1576 aa28.46■■■□□ 2.15
NCL-202ENST00000356936 KDM5BQ9UGL1 1544 aa28.45■■■□□ 2.15
NCL-202ENST00000356936 PLB1Q6P1J6 1458 aa28.44■■■□□ 2.14
NCL-202ENST00000356936 ASXL2Q76L83 1435 aa28.43■■■□□ 2.14
NCL-202ENST00000356936 SAMD9Q5K651 1589 aa28.38■■■□□ 2.13
NCL-202ENST00000356936 P3H3Q8IVL6 736 aa28.37■■■□□ 2.13
NCL-202ENST00000356936 ABCA8O94911 1581 aa28.37■■■□□ 2.13
NCL-202ENST00000356936 ZCCHC11Q5TAX3 1644 aaKnown RBP28.35■■■□□ 2.13
NCL-202ENST00000356936 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
NCL-202ENST00000356936 UBTFP17480 764 aaKnown RBP28.29■■■□□ 2.12
NCL-202ENST00000356936 GLI2P10070 1586 aa28.28■■■□□ 2.12
NCL-202ENST00000356936 EFCAB5A4FU69 1503 aa28.26■■■□□ 2.11
NCL-202ENST00000356936 WDR7Q9Y4E6 1490 aa28.25■■■□□ 2.11
NCL-202ENST00000356936 EPRSP07814 1512 aaKnown RBP28.24■■■□□ 2.11
NCL-202ENST00000356936 EHMT2Q96KQ7 1210 aa28.23■■■□□ 2.11
NCL-202ENST00000356936 FHOD3Q2V2M9 1422 aa28.2■■■□□ 2.11
NCL-202ENST00000356936 RAPGEF6Q8TEU7 1601 aa28.18■■■□□ 2.1
NCL-202ENST00000356936 TSPOAP1O95153 1857 aa28.17■■■□□ 2.1
NCL-202ENST00000356936 ATP10BO94823 1461 aa28.15■■■□□ 2.1
NCL-202ENST00000356936 MAP3K4Q9Y6R4 1608 aa28.12■■■□□ 2.09
NCL-202ENST00000356936 ARID3CA6NKF2 412 aa28.11■■■□□ 2.09
NCL-202ENST00000356936 KDM6BO15054 1643 aa28.1■■■□□ 2.09
NCL-202ENST00000356936 KCNH8Q96L42 1107 aa28.1■■■□□ 2.09
NCL-202ENST00000356936 TEX14Q8IWB6 1497 aa28.09■■■□□ 2.09
NCL-202ENST00000356936 NUP153P49790 1475 aaKnown RBP28.07■■■□□ 2.08
NCL-202ENST00000356936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
NCL-202ENST00000356936 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
NCL-202ENST00000356936 PPRC1Q5VV67 1664 aaKnown RBP28.06■■■□□ 2.08
NCL-202ENST00000356936 ARHGAP35Q9NRY4 1499 aa28.02■■■□□ 2.08
NCL-202ENST00000356936 FMN1Q68DA7 1419 aa28.02■■■□□ 2.08
NCL-202ENST00000356936 CD109Q6YHK3 1445 aa28.02■■■□□ 2.08
NCL-202ENST00000356936 CFAP43Q8NDM7 1665 aa28.01■■■□□ 2.07
NCL-202ENST00000356936 MAGI3Q5TCQ9 1506 aa27.97■■■□□ 2.07
NCL-202ENST00000356936 PLEKHD1A6NEE1 506 aa27.95■■■□□ 2.06
NCL-202ENST00000356936 ABCA9Q8IUA7 1624 aa27.89■■■□□ 2.06
NCL-202ENST00000356936 HECW1Q76N89 1606 aa27.88■■■□□ 2.05
NCL-202ENST00000356936 ATP1B4Q9UN42 357 aaPredicted RBP27.87■■■□□ 2.05
NCL-202ENST00000356936 COL17A1Q9UMD9 1497 aaPredicted RBP27.85■■■□□ 2.05
NCL-202ENST00000356936 PHLDB1Q86UU1 1377 aa27.82■■■□□ 2.04
NCL-202ENST00000356936 CDK13Q14004 1512 aaKnown RBP27.82■■■□□ 2.04
NCL-202ENST00000356936 AEBP2Q6ZN18 517 aaPredicted RBP27.81■■■□□ 2.04
NCL-202ENST00000356936 CDK11AQ9UQ88 783 aaPredicted RBP27.81■■■□□ 2.04
NCL-202ENST00000356936 CLIP1P30622 1438 aa27.8■■■□□ 2.04
NCL-202ENST00000356936 ARAP3Q8WWN8 1544 aa27.75■■■□□ 2.03
NCL-202ENST00000356936 NEO1Q92859 1461 aa27.75■■■□□ 2.03
NCL-202ENST00000356936 CASKIN1Q8WXD9 1431 aa27.74■■■□□ 2.03
NCL-202ENST00000356936 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.72■■■□□ 2.03
NCL-202ENST00000356936 CCDC18Q5T9S5 1454 aa27.69■■■□□ 2.02
NCL-202ENST00000356936 PCF11O94913 1555 aaKnown RBP27.68■■■□□ 2.02
NCL-202ENST00000356936 FYCO1Q9BQS8 1478 aa27.67■■■□□ 2.02
NCL-202ENST00000356936 TROQ12816 1431 aaPredicted RBP27.65■■■□□ 2.02
NCL-202ENST00000356936 TTC37Q6PGP7 1564 aa27.65■■■□□ 2.02
NCL-202ENST00000356936 CFAP74Q9C0B2 1584 aa27.63■■■□□ 2.01
NCL-202ENST00000356936 FANCAO15360 1455 aa27.63■■■□□ 2.01
NCL-202ENST00000356936 KIF14Q15058 1648 aa27.6■■■□□ 2.01
NCL-202ENST00000356936 LRRIQ1Q96JM4 1722 aa27.6■■■□□ 2.01
NCL-202ENST00000356936 CEP162Q5TB80 1403 aa27.59■■■□□ 2.01
NCL-202ENST00000356936 PLCH2O75038 1416 aa27.58■■■□□ 2.01
NCL-202ENST00000356936 AKNAQ7Z591 1439 aa27.58■■■□□ 2.01
NCL-202ENST00000356936 RAPGEF3O95398 923 aa27.57■■■□□ 2
NCL-202ENST00000356936 KDM4FA0A1W2PPD8 638 aa27.56■■■□□ 2
NCL-202ENST00000356936 DENND4BO75064 1496 aaPredicted RBP27.54■■■□□ 2
NCL-202ENST00000356936 EFCAB2Q5VUJ9 269 aa27.51■■□□□ 1.99
NCL-202ENST00000356936 MYO5CQ9NQX4 1742 aa27.5■■□□□ 1.99
NCL-202ENST00000356936 ADGRL1O94910 1474 aa27.5■■□□□ 1.99
NCL-202ENST00000356936 LOC105371045A0A1W2PR82 267 aa27.49■■□□□ 1.99
NCL-202ENST00000356936 FRMPD1Q5SYB0 1578 aa27.48■■□□□ 1.99
NCL-202ENST00000356936 SCAPERQ9BY12 1400 aa27.43■■□□□ 1.98
NCL-202ENST00000356936 ARHGAP5Q13017 1502 aa27.43■■□□□ 1.98
NCL-202ENST00000356936 RICTORQ6R327 1708 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms